BLASTX nr result
ID: Rehmannia31_contig00003808
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00003808
(383 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIN05945.1| hypothetical protein CDL12_21492, partial [Handro... 141 2e-40
ref|XP_020550944.1| 30S ribosomal protein 3-1, chloroplastic [Se... 129 3e-35
ref|XP_022865301.1| 30S ribosomal protein 3-1, chloroplastic-lik... 129 3e-35
ref|XP_022887349.1| 30S ribosomal protein 3-1, chloroplastic-lik... 119 2e-31
ref|XP_020584649.1| 30S ribosomal protein 3, chloroplastic [Phal... 115 8e-30
gb|OMO90244.1| Ribosomal protein PSRP-3/Ycf65 [Corchorus capsula... 114 1e-29
gb|KVI05350.1| Ribosomal protein PSRP-3/Ycf65 [Cynara cardunculu... 113 2e-29
ref|XP_021634873.1| 30S ribosomal protein 3-1, chloroplastic-lik... 113 5e-29
ref|XP_009617357.1| PREDICTED: 30S ribosomal protein 3, chloropl... 112 1e-28
ref|XP_019256825.1| PREDICTED: 30S ribosomal protein 3-1, chloro... 112 1e-28
ref|XP_016476227.1| PREDICTED: 30S ribosomal protein 3-1, chloro... 112 1e-28
ref|XP_009761787.1| PREDICTED: 30S ribosomal protein 3-1, chloro... 112 1e-28
dbj|GAV59190.1| PSRP-3_Ycf65 domain-containing protein, partial ... 111 1e-28
ref|XP_021910399.1| 30S ribosomal protein 3-1, chloroplastic [Ca... 111 2e-28
ref|XP_010265176.1| PREDICTED: 30S ribosomal protein 3, chloropl... 111 2e-28
ref|XP_010103797.1| 30S ribosomal protein 3, chloroplastic [Moru... 111 2e-28
ref|XP_012846175.1| PREDICTED: 30S ribosomal protein 3-1, chloro... 111 2e-28
ref|XP_016666821.1| PREDICTED: 30S ribosomal protein 3, chloropl... 110 2e-28
ref|XP_012478639.1| PREDICTED: 30S ribosomal protein 3, chloropl... 110 2e-28
ref|XP_016489407.1| PREDICTED: 30S ribosomal protein 3, chloropl... 110 3e-28
>gb|PIN05945.1| hypothetical protein CDL12_21492, partial [Handroanthus
impetiginosus]
Length = 166
Score = 141 bits (356), Expect = 2e-40
Identities = 78/127 (61%), Positives = 86/127 (67%)
Frame = +2
Query: 2 VSKNTCFSPSNFSVSVKPNASFRCSLSNNPDLKTKPIIRRIQKVRXXXXXXXXXXXXXXX 181
V N +P N S SVK AS S N+ LK KPI RRI +VR
Sbjct: 5 VFNNLSSAPFNTSFSVKLKASSSHSWLNS-GLKLKPINRRIHRVRVAAAAAELAPAEPET 63
Query: 182 XSDSELVEEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPR 361
SDSE VEEP+K E +VKSV KPRLVLKFIWMEKNIGL LDQ+IPGHG++PLSPYFFWPR
Sbjct: 64 -SDSEFVEEPEKAEVEVKSVAKPRLVLKFIWMEKNIGLALDQLIPGHGTMPLSPYFFWPR 122
Query: 362 KDAWEEL 382
KDAWEEL
Sbjct: 123 KDAWEEL 129
>ref|XP_020550944.1| 30S ribosomal protein 3-1, chloroplastic [Sesamum indicum]
Length = 180
Score = 129 bits (323), Expect = 3e-35
Identities = 77/130 (59%), Positives = 88/130 (67%), Gaps = 3/130 (2%)
Frame = +2
Query: 2 VSKNTCFSPSNFSVSVKPNASFRCSLSNNP--DLKTKPIIRRIQKV-RXXXXXXXXXXXX 172
V KN +P S SVKPNAS SL + P DLK KP+ RRIQ++
Sbjct: 21 VFKNLSSAPFPDSFSVKPNAS---SLHSLPILDLKFKPL-RRIQRLPTAAAATELAPEET 76
Query: 173 XXXXSDSELVEEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFF 352
SDS+ +P+ +VKSVVKPRLVLKFIWMEKNIGLGLDQ+IPGHG+VPLSPYFF
Sbjct: 77 PAEISDSQ---QPEVGGVEVKSVVKPRLVLKFIWMEKNIGLGLDQIIPGHGAVPLSPYFF 133
Query: 353 WPRKDAWEEL 382
WPRKDAWEEL
Sbjct: 134 WPRKDAWEEL 143
>ref|XP_022865301.1| 30S ribosomal protein 3-1, chloroplastic-like [Olea europaea var.
sylvestris]
Length = 182
Score = 129 bits (323), Expect = 3e-35
Identities = 70/126 (55%), Positives = 85/126 (67%)
Frame = +2
Query: 5 SKNTCFSPSNFSVSVKPNASFRCSLSNNPDLKTKPIIRRIQKVRXXXXXXXXXXXXXXXX 184
S+ CF+P S S+KP AS S S + LK +P RIQ++
Sbjct: 22 SQKPCFTPIKTSNSLKPRASSLHS-STHLGLKIRPT-GRIQRLNAAAASELAPAETPTEV 79
Query: 185 SDSELVEEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRK 364
SDSEL ++ +K+ +VKSV KPRLVLKFIWMEKNIGL LDQ+IPG+G+VPLSPYFFWPRK
Sbjct: 80 SDSELAQKSEKLGVEVKSVEKPRLVLKFIWMEKNIGLCLDQMIPGYGTVPLSPYFFWPRK 139
Query: 365 DAWEEL 382
DAWEEL
Sbjct: 140 DAWEEL 145
>ref|XP_022887349.1| 30S ribosomal protein 3-1, chloroplastic-like [Olea europaea var.
sylvestris]
Length = 180
Score = 119 bits (298), Expect = 2e-31
Identities = 66/128 (51%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Frame = +2
Query: 5 SKNTCFSPSNFSVSVKPNASFRCSLSNNPDLKTKPIIRRIQKVRXXXXXXXXXXXXXXXX 184
S+ CF+P S +K AS SL ++ L + I+RIQ++
Sbjct: 21 SQKPCFTPCKTSFILKHRAS---SLHSSTHLGLR--IKRIQRLNSASAAATEVAPAETPT 75
Query: 185 --SDSELVEEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWP 358
S+SE+ + +K+ VKSV KPRLVLKFIWMEKNIGLGLDQ+IPGHG+VPLSPY+FWP
Sbjct: 76 EVSESEVAQSSEKLGVVVKSVEKPRLVLKFIWMEKNIGLGLDQMIPGHGTVPLSPYYFWP 135
Query: 359 RKDAWEEL 382
RKDAWEEL
Sbjct: 136 RKDAWEEL 143
>ref|XP_020584649.1| 30S ribosomal protein 3, chloroplastic [Phalaenopsis equestris]
gb|AQX44225.1| 30S ribosomal protein 3-1 [Phalaenopsis equestris]
Length = 180
Score = 115 bits (287), Expect = 8e-30
Identities = 61/120 (50%), Positives = 79/120 (65%)
Frame = +2
Query: 23 SPSNFSVSVKPNASFRCSLSNNPDLKTKPIIRRIQKVRXXXXXXXXXXXXXXXXSDSELV 202
SP F +S P++S SLS++ + P++RR+Q + V
Sbjct: 28 SPIPFPLS--PHSSSPLSLSSSSTMPPSPLLRRLQLSAAAEDLKAPSPSTDSAIQEQAEV 85
Query: 203 EEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRKDAWEEL 382
++ +K++ VK+V KPRLVLKFIWMEKNIGL LDQ+IPGHGSVPLSPY+FWPRKDAWEEL
Sbjct: 86 KK-EKLKVVVKTVEKPRLVLKFIWMEKNIGLALDQMIPGHGSVPLSPYYFWPRKDAWEEL 144
>gb|OMO90244.1| Ribosomal protein PSRP-3/Ycf65 [Corchorus capsularis]
Length = 183
Score = 114 bits (286), Expect = 1e-29
Identities = 52/60 (86%), Positives = 54/60 (90%)
Frame = +2
Query: 203 EEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRKDAWEEL 382
EEP+K E VK V KPRLVLKFIWMEKNIGL LDQVIPGHG+VPLSPYFFWPRKDAWEEL
Sbjct: 87 EEPEKAEVVVKQVEKPRLVLKFIWMEKNIGLALDQVIPGHGAVPLSPYFFWPRKDAWEEL 146
>gb|KVI05350.1| Ribosomal protein PSRP-3/Ycf65 [Cynara cardunculus var. scolymus]
Length = 157
Score = 113 bits (282), Expect = 2e-29
Identities = 51/55 (92%), Positives = 53/55 (96%)
Frame = +2
Query: 218 VEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRKDAWEEL 382
V+ DVKSV KPRLVLKFIWMEKNIGLGLDQVIPGHGS+PLSPYFFWPRKDAWEEL
Sbjct: 65 VKLDVKSVEKPRLVLKFIWMEKNIGLGLDQVIPGHGSIPLSPYFFWPRKDAWEEL 119
>ref|XP_021634873.1| 30S ribosomal protein 3-1, chloroplastic-like [Manihot esculenta]
gb|OAY31290.1| hypothetical protein MANES_14G099900 [Manihot esculenta]
Length = 189
Score = 113 bits (282), Expect = 5e-29
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = +2
Query: 200 VEEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRKDAWEE 379
++E +KVE VK V KPRLVLKFIWMEKNIGL LDQVIPGHG+VPLSPY+FWPRKDAWEE
Sbjct: 91 IQETEKVEVSVKQVEKPRLVLKFIWMEKNIGLALDQVIPGHGTVPLSPYYFWPRKDAWEE 150
Query: 380 L 382
L
Sbjct: 151 L 151
>ref|XP_009617357.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
tomentosiformis]
Length = 173
Score = 112 bits (279), Expect = 1e-28
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = +2
Query: 185 SDSELVEEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRK 364
SDS +V+E +K ++ K + KPRLVLKFIWMEKNIGLGLDQV+PGHGSVPLSPYFFWPRK
Sbjct: 72 SDS-IVQEIEKTDSKKKVIEKPRLVLKFIWMEKNIGLGLDQVLPGHGSVPLSPYFFWPRK 130
Query: 365 DAWEEL 382
DAWEEL
Sbjct: 131 DAWEEL 136
>ref|XP_019256825.1| PREDICTED: 30S ribosomal protein 3-1, chloroplastic-like [Nicotiana
attenuata]
gb|OIS95772.1| 30s ribosomal protein 3, chloroplastic [Nicotiana attenuata]
Length = 174
Score = 112 bits (279), Expect = 1e-28
Identities = 63/121 (52%), Positives = 75/121 (61%)
Frame = +2
Query: 20 FSPSNFSVSVKPNASFRCSLSNNPDLKTKPIIRRIQKVRXXXXXXXXXXXXXXXXSDSEL 199
F S+FSV+ ++S R KTKP R I K+ +
Sbjct: 28 FRCSSFSVNNTVSSSIR-------SYKTKPT-RNIHKL---FASAATETEPVTAETSGST 76
Query: 200 VEEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRKDAWEE 379
V+E +K ++ K + KPRLVLKFIWMEKNIGLGLDQV+PGHGSVPLSPYFFWPRKDAWEE
Sbjct: 77 VQEIEKTDSKKKVIEKPRLVLKFIWMEKNIGLGLDQVLPGHGSVPLSPYFFWPRKDAWEE 136
Query: 380 L 382
L
Sbjct: 137 L 137
>ref|XP_016476227.1| PREDICTED: 30S ribosomal protein 3-1, chloroplastic-like [Nicotiana
tabacum]
Length = 175
Score = 112 bits (279), Expect = 1e-28
Identities = 64/126 (50%), Positives = 75/126 (59%)
Frame = +2
Query: 5 SKNTCFSPSNFSVSVKPNASFRCSLSNNPDLKTKPIIRRIQKVRXXXXXXXXXXXXXXXX 184
S N S S S KP S L + +T+P+ I
Sbjct: 35 SVNNTVSSSILSYKTKPTRSIH-KLFASAATETEPVTAEI-------------------- 73
Query: 185 SDSELVEEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRK 364
SDS +V+E +K ++ K + KPRLVLKFIWMEKNIGLGLDQV+PGHGSVPLSPYFFWPRK
Sbjct: 74 SDS-VVQEIEKTDSKKKVIEKPRLVLKFIWMEKNIGLGLDQVLPGHGSVPLSPYFFWPRK 132
Query: 365 DAWEEL 382
DAWEEL
Sbjct: 133 DAWEEL 138
>ref|XP_009761787.1| PREDICTED: 30S ribosomal protein 3-1, chloroplastic-like [Nicotiana
sylvestris]
Length = 175
Score = 112 bits (279), Expect = 1e-28
Identities = 64/126 (50%), Positives = 75/126 (59%)
Frame = +2
Query: 5 SKNTCFSPSNFSVSVKPNASFRCSLSNNPDLKTKPIIRRIQKVRXXXXXXXXXXXXXXXX 184
S N S S S KP S L + +T+P+ I
Sbjct: 35 SVNNTVSSSILSYKTKPTRSIH-KLFASAATETEPVTAEI-------------------- 73
Query: 185 SDSELVEEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRK 364
SDS +V+E +K ++ K + KPRLVLKFIWMEKNIGLGLDQV+PGHGSVPLSPYFFWPRK
Sbjct: 74 SDS-VVQEIEKTDSKKKVIEKPRLVLKFIWMEKNIGLGLDQVLPGHGSVPLSPYFFWPRK 132
Query: 365 DAWEEL 382
DAWEEL
Sbjct: 133 DAWEEL 138
>dbj|GAV59190.1| PSRP-3_Ycf65 domain-containing protein, partial [Cephalotus
follicularis]
Length = 174
Score = 111 bits (278), Expect = 1e-28
Identities = 52/66 (78%), Positives = 56/66 (84%)
Frame = +2
Query: 185 SDSELVEEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRK 364
S S +E +KVE VK V KPRLVLKFIWMEKNIGL LDQVIPGHG++PLSPYFFWPRK
Sbjct: 72 STSTTPKEREKVEVLVKQVKKPRLVLKFIWMEKNIGLALDQVIPGHGTIPLSPYFFWPRK 131
Query: 365 DAWEEL 382
DAWEEL
Sbjct: 132 DAWEEL 137
>ref|XP_021910399.1| 30S ribosomal protein 3-1, chloroplastic [Carica papaya]
Length = 165
Score = 111 bits (277), Expect = 2e-28
Identities = 48/66 (72%), Positives = 57/66 (86%)
Frame = +2
Query: 185 SDSELVEEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRK 364
+++E +EPQ+ + VK + KPRLVLKF+WMEKNIGL LD VIPGHG+VPLSPYFFWPRK
Sbjct: 62 TETETQQEPQEAKVTVKQLEKPRLVLKFVWMEKNIGLALDHVIPGHGTVPLSPYFFWPRK 121
Query: 365 DAWEEL 382
DAWEEL
Sbjct: 122 DAWEEL 127
>ref|XP_010265176.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform X1
[Nelumbo nucifera]
Length = 179
Score = 111 bits (278), Expect = 2e-28
Identities = 58/121 (47%), Positives = 74/121 (61%)
Frame = +2
Query: 20 FSPSNFSVSVKPNASFRCSLSNNPDLKTKPIIRRIQKVRXXXXXXXXXXXXXXXXSDSEL 199
F P S+S+KP ++ L +LK +P R ++ S E
Sbjct: 23 FKPFTASISIKPKST-PLHLLPLSELKQRPNRRELRLSASVAAAEAVEEETSNDDSAPEP 81
Query: 200 VEEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRKDAWEE 379
+EE +K+ VK + KPRLVLKFIWMEKNIG+ LDQ IPGHG++PLSPY+FWPRKDAWEE
Sbjct: 82 LEEKEKLGVAVKPMEKPRLVLKFIWMEKNIGISLDQKIPGHGTIPLSPYYFWPRKDAWEE 141
Query: 380 L 382
L
Sbjct: 142 L 142
>ref|XP_010103797.1| 30S ribosomal protein 3, chloroplastic [Morus notabilis]
gb|EXB97159.1| 30S ribosomal protein 3 [Morus notabilis]
Length = 181
Score = 111 bits (278), Expect = 2e-28
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +2
Query: 188 DSELVEEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRKD 367
D VE+ +K+ VK V KPRL+LKFIWMEKNIG+GLDQVIPGHG++PLSPY+FWPRKD
Sbjct: 80 DDSTVEDTEKLGVVVKPVAKPRLILKFIWMEKNIGIGLDQVIPGHGTIPLSPYYFWPRKD 139
Query: 368 AWEEL 382
AWEEL
Sbjct: 140 AWEEL 144
>ref|XP_012846175.1| PREDICTED: 30S ribosomal protein 3-1, chloroplastic-like
[Erythranthe guttata]
Length = 171
Score = 111 bits (277), Expect = 2e-28
Identities = 52/60 (86%), Positives = 56/60 (93%), Gaps = 1/60 (1%)
Frame = +2
Query: 206 EPQKV-EADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRKDAWEEL 382
EPQ V EA+ K++ KPRLVLKFIWM+KNIGLGLDQVIPGHGSVPLSPYFFWPRKDAWEEL
Sbjct: 75 EPQVVVEAEAKTMGKPRLVLKFIWMDKNIGLGLDQVIPGHGSVPLSPYFFWPRKDAWEEL 134
>ref|XP_016666821.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Gossypium
hirsutum]
Length = 163
Score = 110 bits (276), Expect = 2e-28
Identities = 51/58 (87%), Positives = 52/58 (89%)
Frame = +2
Query: 209 PQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRKDAWEEL 382
PQK E VK V KPRLVLKFIWMEKNIGL LDQVIPGHG+VPLSPYFFWPRKDAWEEL
Sbjct: 67 PQKPEVVVKQVGKPRLVLKFIWMEKNIGLALDQVIPGHGTVPLSPYFFWPRKDAWEEL 124
>ref|XP_012478639.1| PREDICTED: 30S ribosomal protein 3, chloroplastic [Gossypium
raimondii]
gb|KJB30338.1| hypothetical protein B456_005G138300 [Gossypium raimondii]
gb|KJB30339.1| hypothetical protein B456_005G138300 [Gossypium raimondii]
gb|PPD75717.1| hypothetical protein GOBAR_DD27354 [Gossypium barbadense]
Length = 163
Score = 110 bits (276), Expect = 2e-28
Identities = 51/58 (87%), Positives = 52/58 (89%)
Frame = +2
Query: 209 PQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRKDAWEEL 382
PQK E VK V KPRLVLKFIWMEKNIGL LDQVIPGHG+VPLSPYFFWPRKDAWEEL
Sbjct: 67 PQKPEVVVKQVGKPRLVLKFIWMEKNIGLALDQVIPGHGTVPLSPYFFWPRKDAWEEL 124
>ref|XP_016489407.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
tabacum]
Length = 175
Score = 110 bits (276), Expect = 3e-28
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = +2
Query: 185 SDSELVEEPQKVEADVKSVVKPRLVLKFIWMEKNIGLGLDQVIPGHGSVPLSPYFFWPRK 364
SDS +V+E +K ++ K + KPRLVLKFIWMEKNIGLGLDQV+PGHGSVPLSPYFFWPRK
Sbjct: 74 SDS-IVQEIEKNDSKKKVIEKPRLVLKFIWMEKNIGLGLDQVLPGHGSVPLSPYFFWPRK 132
Query: 365 DAWEEL 382
DAWEEL
Sbjct: 133 DAWEEL 138