BLASTX nr result

ID: Rehmannia31_contig00003150 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00003150
         (360 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022877427.1| multiple organellar RNA editing factor 8, ch...    57   8e-07
ref|XP_011098243.1| multiple organellar RNA editing factor 8, ch...    54   1e-05

>ref|XP_022877427.1| multiple organellar RNA editing factor 8,
           chloroplastic/mitochondrial-like [Olea europaea var.
           sylvestris]
          Length = 452

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 30/56 (53%), Positives = 34/56 (60%), Gaps = 9/56 (16%)
 Frame = +1

Query: 1   QNSNNFGPNMGPSPPVQNQNSYPPNQGQNQG---------AYGNPSLNQNVPGRDV 141
           QN N++GPNMG S P QNQNSY P+ G   G           GNP  NQN+PGRDV
Sbjct: 392 QNRNSYGPNMG-SVPGQNQNSYGPSTGSGPGQNQNYDPNFGAGNPHQNQNIPGRDV 446


>ref|XP_011098243.1| multiple organellar RNA editing factor 8,
           chloroplastic/mitochondrial [Sesamum indicum]
          Length = 440

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 29/55 (52%), Positives = 35/55 (63%), Gaps = 10/55 (18%)
 Frame = +1

Query: 7   SNNFGPNMGPSPPVQNQNSYPPN----QGQNQGAY------GNPSLNQNVPGRDV 141
           + N+ PNMGP P   NQN+Y PN    QGQ+Q  Y      GNPS +QNVPGRD+
Sbjct: 383 NQNYVPNMGPGP---NQNNYAPNMGPGQGQSQSGYAPGVGGGNPSQSQNVPGRDL 434


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