BLASTX nr result

ID: Rehmannia31_contig00003148 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00003148
         (371 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011098243.1| multiple organellar RNA editing factor 8, ch...    58   3e-07
ref|XP_012850636.1| PREDICTED: multiple organellar RNA editing f...    57   6e-07
gb|EYU26338.1| hypothetical protein MIMGU_mgv1a004972mg [Erythra...    57   7e-07

>ref|XP_011098243.1| multiple organellar RNA editing factor 8,
           chloroplastic/mitochondrial [Sesamum indicum]
          Length = 440

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 42/116 (36%), Positives = 46/116 (39%), Gaps = 6/116 (5%)
 Frame = +2

Query: 38  MRAPPGNNAPNHQYGPGPNNG---YQSXXXXXXXXXXXXXXXXXXXXXXAYAPNMGGGNP 208
           MR PP NNAPN+QYG G N+G   YQS                       Y PNMGGG P
Sbjct: 300 MRGPP-NNAPNYQYGHGNNSGGAPYQSGPGPNQNGFAPSMVPGQGQNQSGYGPNMGGGFP 358

Query: 209 YQGPPNVPGRDSAQPPSPNSFAPNRXXXXXXXXXXXXXNNMGYGP---PGQNSNNF 367
                  P R S    +P  FAPN               N  Y P   PG N NN+
Sbjct: 359 -------PNRGSGPGQAPGGFAPN--------MGYGTGQNQNYVPNMGPGPNQNNY 399


>ref|XP_012850636.1| PREDICTED: multiple organellar RNA editing factor 8,
           chloroplastic/mitochondrial [Erythranthe guttata]
          Length = 427

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
 Frame = +2

Query: 41  RAPPGNNAPNHQYGPGPNNGYQSXXXXXXXXXXXXXXXXXXXXXXAYAPNMGGGN---PY 211
           R PP N  PN+Q+  GPNNG                          YAP  G G    PY
Sbjct: 313 RGPPTNAPPNYQFSNGPNNG-------------------------GYAPPQGPGGGYPPY 347

Query: 212 QGPPNVPGRDSAQPPSP--NSFAPNRXXXXXXXXXXXXXNNMGYG-----PP--GQNSNN 364
           Q     P RD   PP+P  N+FAPNR             NN GYG     PP  GQN N 
Sbjct: 348 QNQNAPPSRDMPPPPNPGQNNFAPNRGFNPGQNPSGFAPNN-GYGNQNGYPPNMGQNQNG 406

Query: 365 F 367
           +
Sbjct: 407 Y 407


>gb|EYU26338.1| hypothetical protein MIMGU_mgv1a004972mg [Erythranthe guttata]
          Length = 502

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 43/121 (35%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
 Frame = +2

Query: 41  RAPPGNNAPNHQYGPGPNNGYQSXXXXXXXXXXXXXXXXXXXXXXAYAPNMGGGN---PY 211
           R PP N  PN+Q+  GPNNG                          YAP  G G    PY
Sbjct: 388 RGPPTNAPPNYQFSNGPNNG-------------------------GYAPPQGPGGGYPPY 422

Query: 212 QGPPNVPGRDSAQPPSP--NSFAPNRXXXXXXXXXXXXXNNMGYG-----PP--GQNSNN 364
           Q     P RD   PP+P  N+FAPNR             NN GYG     PP  GQN N 
Sbjct: 423 QNQNAPPSRDMPPPPNPGQNNFAPNRGFNPGQNPSGFAPNN-GYGNQNGYPPNMGQNQNG 481

Query: 365 F 367
           +
Sbjct: 482 Y 482


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