BLASTX nr result
ID: Rehmannia31_contig00003127
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00003127
(645 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020551664.1| pentatricopeptide repeat-containing protein ... 118 5e-27
gb|EPS58731.1| hypothetical protein M569_16081, partial [Genlise... 103 9e-25
ref|XP_021900339.1| LOW QUALITY PROTEIN: pentatricopeptide repea... 103 6e-22
ref|XP_021683763.1| pentatricopeptide repeat-containing protein ... 99 2e-20
ref|XP_021683762.1| pentatricopeptide repeat-containing protein ... 99 2e-20
ref|XP_022898620.1| pentatricopeptide repeat-containing protein ... 98 6e-20
ref|XP_022898619.1| pentatricopeptide repeat-containing protein ... 98 6e-20
ref|XP_022898618.1| pentatricopeptide repeat-containing protein ... 98 6e-20
gb|EYU37881.1| hypothetical protein MIMGU_mgv1a002592mg [Erythra... 98 7e-20
ref|XP_012837131.1| PREDICTED: pentatricopeptide repeat-containi... 98 8e-20
ref|XP_021602991.1| pentatricopeptide repeat-containing protein ... 96 5e-19
gb|PON55119.1| Tetratricopeptide-like helical domain containing ... 96 5e-19
gb|PNT41625.1| hypothetical protein POPTR_004G166600v3 [Populus ... 95 7e-19
ref|XP_011037246.1| PREDICTED: pentatricopeptide repeat-containi... 95 7e-19
ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Popu... 95 7e-19
ref|XP_011037244.1| PREDICTED: pentatricopeptide repeat-containi... 95 7e-19
ref|XP_002534048.1| PREDICTED: pentatricopeptide repeat-containi... 95 7e-19
ref|XP_007131724.1| hypothetical protein PHAVU_011G0363000g, par... 87 1e-18
ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-18
gb|PON83396.1| Pentatricopeptide repeat [Trema orientalis] 94 1e-18
>ref|XP_020551664.1| pentatricopeptide repeat-containing protein MRL1, chloroplastic
[Sesamum indicum]
ref|XP_020551665.1| pentatricopeptide repeat-containing protein MRL1, chloroplastic
[Sesamum indicum]
Length = 1190
Score = 118 bits (296), Expect = 5e-27
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGLSYQGNESYGKIRINGV IR+WFQPKL SP+ +K+IDL SS+RHLGSGISRQQRKIR
Sbjct: 1124 RLGLSYQGNESYGKIRINGVIIRKWFQPKLGSPYREKKIDLSSSIRHLGSGISRQQRKIR 1183
Query: 181 TGHLSLE 201
T H SLE
Sbjct: 1184 TVHFSLE 1190
>gb|EPS58731.1| hypothetical protein M569_16081, partial [Genlisea aurea]
Length = 124
Score = 103 bits (257), Expect = 9e-25
Identities = 51/66 (77%), Positives = 56/66 (84%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGLSY GNESYGKIRINGVTIRRWFQPKL S F++K ++L SL HL SGISRQQ KIR
Sbjct: 59 RLGLSYIGNESYGKIRINGVTIRRWFQPKLESRFSEKTVNLNPSLTHLSSGISRQQLKIR 118
Query: 181 TGHLSL 198
T +LSL
Sbjct: 119 TSYLSL 124
>ref|XP_021900339.1| LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein
MRL1, chloroplastic [Carica papaya]
Length = 1112
Score = 103 bits (258), Expect = 6e-22
Identities = 50/67 (74%), Positives = 57/67 (85%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGL+YQGNESYGKIRING+T+RRWFQPKL SPF+ K +L SSL LG GIS QQR IR
Sbjct: 1046 RLGLTYQGNESYGKIRINGLTLRRWFQPKLASPFSGKPDELNSSLARLGKGISHQQRNIR 1105
Query: 181 TGHLSLE 201
TG+LSL+
Sbjct: 1106 TGNLSLD 1112
>ref|XP_021683763.1| pentatricopeptide repeat-containing protein MRL1, chloroplastic
isoform X2 [Hevea brasiliensis]
Length = 1095
Score = 99.4 bits (246), Expect = 2e-20
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGL YQGNESYGKIRING++IRRWFQPKL+SPF+ K +L SS +G GI QQR IR
Sbjct: 1029 RLGLPYQGNESYGKIRINGISIRRWFQPKLSSPFSRKPGELSSSQSRIGKGIIHQQRNIR 1088
Query: 181 TGHLSLE 201
TG+LSLE
Sbjct: 1089 TGNLSLE 1095
>ref|XP_021683762.1| pentatricopeptide repeat-containing protein MRL1, chloroplastic
isoform X1 [Hevea brasiliensis]
Length = 1101
Score = 99.4 bits (246), Expect = 2e-20
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGL YQGNESYGKIRING++IRRWFQPKL+SPF+ K +L SS +G GI QQR IR
Sbjct: 1035 RLGLPYQGNESYGKIRINGISIRRWFQPKLSSPFSRKPGELSSSQSRIGKGIIHQQRNIR 1094
Query: 181 TGHLSLE 201
TG+LSLE
Sbjct: 1095 TGNLSLE 1101
>ref|XP_022898620.1| pentatricopeptide repeat-containing protein MRL1, chloroplastic
isoform X3 [Olea europaea var. sylvestris]
Length = 968
Score = 98.2 bits (243), Expect = 6e-20
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGL+YQGNES+GKIRINGV+I++WFQPKLNSPF K D S LG GI QQR IR
Sbjct: 902 RLGLTYQGNESFGKIRINGVSIKKWFQPKLNSPFRGKATDFNSFQARLGRGIIHQQRNIR 961
Query: 181 TGHLSLE 201
TG+LSLE
Sbjct: 962 TGNLSLE 968
>ref|XP_022898619.1| pentatricopeptide repeat-containing protein MRL1, chloroplastic
isoform X2 [Olea europaea var. sylvestris]
Length = 1078
Score = 98.2 bits (243), Expect = 6e-20
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGL+YQGNES+GKIRINGV+I++WFQPKLNSPF K D S LG GI QQR IR
Sbjct: 1012 RLGLTYQGNESFGKIRINGVSIKKWFQPKLNSPFRGKATDFNSFQARLGRGIIHQQRNIR 1071
Query: 181 TGHLSLE 201
TG+LSLE
Sbjct: 1072 TGNLSLE 1078
>ref|XP_022898618.1| pentatricopeptide repeat-containing protein MRL1, chloroplastic
isoform X1 [Olea europaea var. sylvestris]
Length = 1091
Score = 98.2 bits (243), Expect = 6e-20
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGL+YQGNES+GKIRINGV+I++WFQPKLNSPF K D S LG GI QQR IR
Sbjct: 1025 RLGLTYQGNESFGKIRINGVSIKKWFQPKLNSPFRGKATDFNSFQARLGRGIIHQQRNIR 1084
Query: 181 TGHLSLE 201
TG+LSLE
Sbjct: 1085 TGNLSLE 1091
>gb|EYU37881.1| hypothetical protein MIMGU_mgv1a002592mg [Erythranthe guttata]
Length = 656
Score = 97.8 bits (242), Expect = 7e-20
Identities = 44/65 (67%), Positives = 55/65 (84%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGLSYQGNES+GK+++NG+TIR W QP+L +PF K+ID G LR LGS +SRQ++KIR
Sbjct: 591 RLGLSYQGNESFGKMKLNGLTIRMWLQPELGTPFGGKKIDRGPPLRRLGSDLSRQRQKIR 650
Query: 181 TGHLS 195
TGHLS
Sbjct: 651 TGHLS 655
>ref|XP_012837131.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic [Erythranthe guttata]
Length = 1102
Score = 97.8 bits (242), Expect = 8e-20
Identities = 44/65 (67%), Positives = 55/65 (84%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGLSYQGNES+GK+++NG+TIR W QP+L +PF K+ID G LR LGS +SRQ++KIR
Sbjct: 1037 RLGLSYQGNESFGKMKLNGLTIRMWLQPELGTPFGGKKIDRGPPLRRLGSDLSRQRQKIR 1096
Query: 181 TGHLS 195
TGHLS
Sbjct: 1097 TGHLS 1101
>ref|XP_021602991.1| pentatricopeptide repeat-containing protein MRL1, chloroplastic
[Manihot esculenta]
gb|OAY21449.1| hypothetical protein MANES_S086100 [Manihot esculenta]
Length = 1098
Score = 95.5 bits (236), Expect = 5e-19
Identities = 46/67 (68%), Positives = 55/67 (82%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
R+GL YQGNESYGKIRINGV+++RWFQPKL+SPF+ K +L SS +G GI QQR IR
Sbjct: 1032 RIGLPYQGNESYGKIRINGVSLKRWFQPKLSSPFSRKPGELSSSQLIIGKGIIHQQRNIR 1091
Query: 181 TGHLSLE 201
TG+LSLE
Sbjct: 1092 TGNLSLE 1098
>gb|PON55119.1| Tetratricopeptide-like helical domain containing protein [Parasponia
andersonii]
Length = 1134
Score = 95.5 bits (236), Expect = 5e-19
Identities = 46/67 (68%), Positives = 54/67 (80%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGLSYQGNESYGKIRING+TI+RWF PKL SPF+ K ++ S LG GI+ QQR IR
Sbjct: 1068 RLGLSYQGNESYGKIRINGLTIKRWFMPKLASPFSGKPEEINLSQFRLGKGIAHQQRNIR 1127
Query: 181 TGHLSLE 201
TG+LSL+
Sbjct: 1128 TGNLSLD 1134
>gb|PNT41625.1| hypothetical protein POPTR_004G166600v3 [Populus trichocarpa]
Length = 1104
Score = 95.1 bits (235), Expect = 7e-19
Identities = 46/67 (68%), Positives = 53/67 (79%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGL YQGNESYGKIRING+++RRW QPKL+SPF+ K + +SL LG GIS QQR IR
Sbjct: 1038 RLGLPYQGNESYGKIRINGISLRRWLQPKLDSPFSGKPGEWSTSLSRLGKGISFQQRNIR 1097
Query: 181 TGHLSLE 201
TG SLE
Sbjct: 1098 TGDFSLE 1104
>ref|XP_011037246.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic isoform X2 [Populus euphratica]
Length = 1104
Score = 95.1 bits (235), Expect = 7e-19
Identities = 46/67 (68%), Positives = 53/67 (79%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGL YQGNESYGKIRING+++RRW QPKL+SPF+ K + +SL LG GIS QQR IR
Sbjct: 1038 RLGLPYQGNESYGKIRINGISLRRWLQPKLDSPFSGKPGEWSTSLSRLGKGISFQQRNIR 1097
Query: 181 TGHLSLE 201
TG SLE
Sbjct: 1098 TGDFSLE 1104
>ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Populus trichocarpa]
Length = 1104
Score = 95.1 bits (235), Expect = 7e-19
Identities = 46/67 (68%), Positives = 53/67 (79%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGL YQGNESYGKIRING+++RRW QPKL+SPF+ K + +SL LG GIS QQR IR
Sbjct: 1038 RLGLPYQGNESYGKIRINGISLRRWLQPKLDSPFSGKPGEWSTSLSRLGKGISFQQRNIR 1097
Query: 181 TGHLSLE 201
TG SLE
Sbjct: 1098 TGDFSLE 1104
>ref|XP_011037244.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic isoform X1 [Populus euphratica]
Length = 1109
Score = 95.1 bits (235), Expect = 7e-19
Identities = 46/67 (68%), Positives = 53/67 (79%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGL YQGNESYGKIRING+++RRW QPKL+SPF+ K + +SL LG GIS QQR IR
Sbjct: 1043 RLGLPYQGNESYGKIRINGISLRRWLQPKLDSPFSGKPGEWSTSLSRLGKGISFQQRNIR 1102
Query: 181 TGHLSLE 201
TG SLE
Sbjct: 1103 TGDFSLE 1109
>ref|XP_002534048.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic [Ricinus communis]
gb|EEF28334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1129
Score = 95.1 bits (235), Expect = 7e-19
Identities = 45/66 (68%), Positives = 53/66 (80%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGL YQGNESYGKIRING+++RRW QPKL SPF+ K +L SL +G GI+ QQR IR
Sbjct: 1063 RLGLPYQGNESYGKIRINGISLRRWLQPKLASPFSGKPEELSFSLSRIGKGITHQQRNIR 1122
Query: 181 TGHLSL 198
TG+LSL
Sbjct: 1123 TGNLSL 1128
>ref|XP_007131724.1| hypothetical protein PHAVU_011G0363000g, partial [Phaseolus
vulgaris]
gb|ESW03718.1| hypothetical protein PHAVU_011G0363000g, partial [Phaseolus
vulgaris]
Length = 108
Score = 87.4 bits (215), Expect = 1e-18
Identities = 42/67 (62%), Positives = 51/67 (76%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RL + +QGNESYGK+RINGV ++ WFQPKL SPF+ K D SS+ LG GIS QQR IR
Sbjct: 42 RLQIPHQGNESYGKLRINGVALKIWFQPKLASPFSGKPGDWSSSMSRLGKGISHQQRNIR 101
Query: 181 TGHLSLE 201
G+LSL+
Sbjct: 102 IGNLSLD 108
>ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic [Fragaria vesca subsp. vesca]
Length = 1028
Score = 94.4 bits (233), Expect = 1e-18
Identities = 45/67 (67%), Positives = 53/67 (79%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLG+ YQGNES GKIRI+G+T++RWFQPKL SPF K +LGSS LG GI QQR IR
Sbjct: 962 RLGIDYQGNESRGKIRISGLTLKRWFQPKLASPFTGKLAELGSSQLRLGKGIMHQQRNIR 1021
Query: 181 TGHLSLE 201
TG+LSL+
Sbjct: 1022 TGNLSLD 1028
>gb|PON83396.1| Pentatricopeptide repeat [Trema orientalis]
Length = 1137
Score = 94.4 bits (233), Expect = 1e-18
Identities = 46/67 (68%), Positives = 54/67 (80%)
Frame = +1
Query: 1 RLGLSYQGNESYGKIRINGVTIRRWFQPKLNSPFNDKRIDLGSSLRHLGSGISRQQRKIR 180
RLGLSYQGNESYGKIRING+TI+RWF PKL SPF+ K ++ S LG GI+ QQR IR
Sbjct: 1071 RLGLSYQGNESYGKIRINGLTIKRWFIPKLASPFSGKPEEINLSQFRLGKGIAHQQRNIR 1130
Query: 181 TGHLSLE 201
TG+LSL+
Sbjct: 1131 TGNLSLD 1137