BLASTX nr result
ID: Rehmannia31_contig00003009
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00003009
(446 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011099592.1| DNA-directed RNA polymerase III subunit RPC5... 157 4e-42
gb|KZV19013.1| hypothetical protein F511_08441 [Dorcoceras hygro... 117 2e-27
emb|CDP02819.1| unnamed protein product [Coffea canephora] 106 9e-24
ref|XP_022870607.1| DNA-directed RNA polymerase III subunit RPC5... 105 2e-23
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 105 2e-23
ref|XP_019173144.1| PREDICTED: DNA-directed RNA polymerase III s... 97 1e-20
ref|XP_024023312.1| DNA-directed RNA polymerase III subunit RPC5... 97 2e-20
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor... 97 2e-20
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati... 96 3e-20
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo... 96 3e-20
ref|XP_017969869.1| PREDICTED: DNA-directed RNA polymerase III s... 96 3e-20
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati... 96 3e-20
ref|XP_017969867.1| PREDICTED: DNA-directed RNA polymerase III s... 96 3e-20
ref|XP_022775288.1| DNA-directed RNA polymerase III subunit RPC5... 96 4e-20
ref|XP_023924053.1| uncharacterized protein LOC112035460, partia... 91 7e-20
ref|XP_015890226.1| PREDICTED: DNA-directed RNA polymerase III s... 94 1e-19
ref|XP_021273985.1| DNA-directed RNA polymerase III subunit RPC5... 94 1e-19
ref|XP_017216817.1| PREDICTED: DNA-directed RNA polymerase III s... 94 3e-19
gb|KDO79497.1| hypothetical protein CISIN_1g0055732mg, partial [... 91 4e-19
ref|XP_017218263.1| PREDICTED: DNA-directed RNA polymerase III s... 93 5e-19
>ref|XP_011099592.1| DNA-directed RNA polymerase III subunit RPC5 [Sesamum indicum]
Length = 683
Score = 157 bits (398), Expect = 4e-42
Identities = 85/148 (57%), Positives = 94/148 (63%)
Frame = -2
Query: 445 PKIEPSQSLQPSASDSVEAFPVPKKEELGIKSDIKPEYANDAVEMXXXXXXXXXXXXXXD 266
PK EPSQ P+ASD+VE PVPKKEE GIK DIKPE+AND +M D
Sbjct: 34 PKTEPSQLPPPAASDTVEGLPVPKKEEPGIKPDIKPEFANDGNDMDVEVKPEVKEEEGDD 93
Query: 265 LMXXXXXXXXXXXXXXXXXXXXVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRV 86
LM YF+P +D TRLYVLQYPLR WRPYELD RC+EVRV
Sbjct: 94 LMETEAEAEPDDAIVREIDV---YFTPSIDSNTRLYVLQYPLRPLWRPYELDDRCDEVRV 150
Query: 85 KPASREVEIDLTVYVDSKNYDSGADPRV 2
KPAS E+E+DL V VDSKNYDSGADPRV
Sbjct: 151 KPASAELEVDLAVDVDSKNYDSGADPRV 178
>gb|KZV19013.1| hypothetical protein F511_08441 [Dorcoceras hygrometricum]
Length = 686
Score = 117 bits (292), Expect = 2e-27
Identities = 69/155 (44%), Positives = 83/155 (53%), Gaps = 9/155 (5%)
Frame = -2
Query: 442 KIEPSQSLQPSASDSVE-------AFPVPKKEELGIKSDIKPEYANDAVEMXXXXXXXXX 284
KIEPSQ L S+SD E + P PKKEELG+K PE+AND VEM
Sbjct: 37 KIEPSQQLSASSSDPAELIRKESDSIPSPKKEELGVK----PEFANDVVEMDIDFKHGEI 92
Query: 283 XXXXXDL--MXXXXXXXXXXXXXXXXXXXXVYFSPCVDPKTRLYVLQYPLRQQWRPYELD 110
VY + +DP TRLYVLQYPLR WRPYE++
Sbjct: 93 VDNEVKKEETEDLMETGEGEAEDEVVREIDVYLTSSLDPNTRLYVLQYPLRPLWRPYEME 152
Query: 109 QRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPR 5
+RCE+VRVKPAS E+E+DL + +SKNYD A R
Sbjct: 153 ERCEQVRVKPASNEIEVDLAIDFESKNYDRDAGSR 187
>emb|CDP02819.1| unnamed protein product [Coffea canephora]
Length = 687
Score = 106 bits (264), Expect = 9e-24
Identities = 49/65 (75%), Positives = 53/65 (81%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 17
Y +P +DP T+LYVLQYPLR WRPYELD RCEEVRVK S EVE+DL V VDSKNYDS
Sbjct: 114 YLTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKSKSAEVEVDLAVDVDSKNYDSD 173
Query: 16 ADPRV 2
ADPRV
Sbjct: 174 ADPRV 178
>ref|XP_022870607.1| DNA-directed RNA polymerase III subunit RPC5-like [Olea europaea
var. sylvestris]
ref|XP_022870608.1| DNA-directed RNA polymerase III subunit RPC5-like [Olea europaea
var. sylvestris]
Length = 627
Score = 105 bits (262), Expect = 2e-23
Identities = 60/131 (45%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Frame = -2
Query: 376 KKEELGIKSDIKPEYANDAVEMXXXXXXXXXXXXXXDLMXXXXXXXXXXXXXXXXXXXXV 197
KKEE ++D +PEY + VEM ++ +
Sbjct: 37 KKEEPKEEADARPEYEKNEVEMDFEVEVKPDEENENEIKEKMIDDLMETDEAEGEGPDDI 96
Query: 196 ------YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDS 35
YF+P +DP TRLYVLQYPLR WRPYEL+ RCEEVRVKPAS E EIDL V DS
Sbjct: 97 VREIDVYFAPSIDPYTRLYVLQYPLRPVWRPYELEDRCEEVRVKPASSEFEIDLAVNFDS 156
Query: 34 KNYDSGADPRV 2
NYD ADPRV
Sbjct: 157 DNYDRDADPRV 167
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 105 bits (262), Expect = 2e-23
Identities = 49/65 (75%), Positives = 53/65 (81%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 17
Y +P +DP T+LYVLQYPLR WRPYELD RCEEVRVK S EVE+DL V VDSKNYDS
Sbjct: 114 YLTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSD 173
Query: 16 ADPRV 2
ADPRV
Sbjct: 174 ADPRV 178
>ref|XP_019173144.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Ipomoea
nil]
Length = 702
Score = 97.4 bits (241), Expect = 1e-20
Identities = 42/62 (67%), Positives = 52/62 (83%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 17
Y +P +D T+LYV+QYPLR WRPYE+++RCEEVRVKPAS EVE+DL++ VDSKNYD
Sbjct: 127 YLTPSIDQDTKLYVMQYPLRPIWRPYEMEERCEEVRVKPASSEVEVDLSIDVDSKNYDRN 186
Query: 16 AD 11
AD
Sbjct: 187 AD 188
>ref|XP_024023312.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
Length = 694
Score = 96.7 bits (239), Expect = 2e-20
Identities = 44/65 (67%), Positives = 53/65 (81%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 17
+F+P +D T+LYVLQYPLR WRPYELD+RCEEVRVKPAS EVE+DL++ VDSKNYD
Sbjct: 117 FFNPKIDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVEMDLSLDVDSKNYDPD 176
Query: 16 ADPRV 2
R+
Sbjct: 177 CGDRL 181
>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
Length = 732
Score = 96.7 bits (239), Expect = 2e-20
Identities = 44/65 (67%), Positives = 53/65 (81%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 17
+F+P +D T+LYVLQYPLR WRPYELD+RCEEVRVKPAS EVE+DL++ VDSKNYD
Sbjct: 117 FFNPKIDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVEMDLSLDVDSKNYDPD 176
Query: 16 ADPRV 2
R+
Sbjct: 177 CGDRL 181
>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
[Theobroma cacao]
Length = 588
Score = 96.3 bits (238), Expect = 3e-20
Identities = 44/59 (74%), Positives = 50/59 (84%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDS 20
+F+P +D T+LYVLQYPLR WRPYELD+RCEEVRVKPAS EVE+DL V VDS NYDS
Sbjct: 31 FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDS 89
>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
Length = 700
Score = 96.3 bits (238), Expect = 3e-20
Identities = 44/59 (74%), Positives = 50/59 (84%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDS 20
+F+P +D T+LYVLQYPLR WRPYELD+RCEEVRVKPAS EVE+DL V VDS NYDS
Sbjct: 128 FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDS 186
>ref|XP_017969869.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
[Theobroma cacao]
Length = 702
Score = 96.3 bits (238), Expect = 3e-20
Identities = 44/59 (74%), Positives = 50/59 (84%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDS 20
+F+P +D T+LYVLQYPLR WRPYELD+RCEEVRVKPAS EVE+DL V VDS NYDS
Sbjct: 130 FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDS 188
>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao]
Length = 736
Score = 96.3 bits (238), Expect = 3e-20
Identities = 44/59 (74%), Positives = 50/59 (84%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDS 20
+F+P +D T+LYVLQYPLR WRPYELD+RCEEVRVKPAS EVE+DL V VDS NYDS
Sbjct: 128 FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDS 186
>ref|XP_017969867.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
[Theobroma cacao]
Length = 738
Score = 96.3 bits (238), Expect = 3e-20
Identities = 44/59 (74%), Positives = 50/59 (84%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDS 20
+F+P +D T+LYVLQYPLR WRPYELD+RCEEVRVKPAS EVE+DL V VDS NYDS
Sbjct: 130 FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDS 188
>ref|XP_022775288.1| DNA-directed RNA polymerase III subunit RPC5 [Durio zibethinus]
Length = 697
Score = 95.9 bits (237), Expect = 4e-20
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDS 20
YF+P +D T+LYVLQYPLR WRPYELD+RCEEVRVKP+S EVEI+++V VDS NYDS
Sbjct: 125 YFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPSSGEVEIEMSVDVDSNNYDS 183
>ref|XP_023924053.1| uncharacterized protein LOC112035460, partial [Quercus suber]
Length = 216
Score = 91.3 bits (225), Expect = 7e-20
Identities = 40/65 (61%), Positives = 50/65 (76%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 17
+F+P +D T+LYV+QYPLR WRPYELD RCEEVRVKP S ++E+DL + VDSKNYD
Sbjct: 124 FFNPAMDDGTKLYVMQYPLRPCWRPYELDDRCEEVRVKPVSAQMEVDLKIDVDSKNYDKD 183
Query: 16 ADPRV 2
R+
Sbjct: 184 FGERL 188
>ref|XP_015890226.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Ziziphus
jujuba]
Length = 696
Score = 94.4 bits (233), Expect = 1e-19
Identities = 42/58 (72%), Positives = 50/58 (86%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYD 23
+ +P +D +T+LYVLQYPLR WRPYELD+RCEEVRVKPAS EVE+DL + VDSKNYD
Sbjct: 121 FLNPKIDDETQLYVLQYPLRPWWRPYELDERCEEVRVKPASAEVEVDLALDVDSKNYD 178
>ref|XP_021273985.1| DNA-directed RNA polymerase III subunit RPC5 [Herrania umbratica]
Length = 707
Score = 94.4 bits (233), Expect = 1e-19
Identities = 42/59 (71%), Positives = 50/59 (84%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDS 20
+F+P +D T+LYVLQYPLR WRPYELD+RCEEVRVKPA+ EVE+D+ V VDS NYDS
Sbjct: 135 FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPATGEVEMDMAVDVDSNNYDS 193
>ref|XP_017216817.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Daucus carota subsp. sativus]
gb|KZM86223.1| hypothetical protein DCAR_023357 [Daucus carota subsp. sativus]
Length = 632
Score = 93.6 bits (231), Expect = 3e-19
Identities = 42/65 (64%), Positives = 52/65 (80%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 17
YF+P VD ++LYV+QYPL+ WRPYELD +CEEVRVKP S ++EIDL V VDSKNYDS
Sbjct: 115 YFAPSVDVNSKLYVMQYPLKPCWRPYELDDQCEEVRVKPDSSQIEIDLAVDVDSKNYDSS 174
Query: 16 ADPRV 2
+ R+
Sbjct: 175 SGVRM 179
>gb|KDO79497.1| hypothetical protein CISIN_1g0055732mg, partial [Citrus sinensis]
gb|KDO79498.1| hypothetical protein CISIN_1g0055732mg, partial [Citrus sinensis]
Length = 265
Score = 90.5 bits (223), Expect = 4e-19
Identities = 38/59 (64%), Positives = 51/59 (86%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDS 20
+F+P +D ++LYV+QYPLR WRPYELD+RCEEVRVKP++ EVE+DL++ VDS N+DS
Sbjct: 120 FFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDS 178
>ref|XP_017218263.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Daucus
carota subsp. sativus]
gb|KZM88855.1| hypothetical protein DCAR_025930 [Daucus carota subsp. sativus]
Length = 691
Score = 92.8 bits (229), Expect = 5e-19
Identities = 42/65 (64%), Positives = 53/65 (81%)
Frame = -2
Query: 196 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 17
+F+P +D K+ LYV+QYPL+ WRPYELD++CEEVRVKP S EVEIDLTV +DSKNYD
Sbjct: 121 FFTPSLDSKSLLYVMQYPLKPCWRPYELDEQCEEVRVKPTSSEVEIDLTVDLDSKNYDPD 180
Query: 16 ADPRV 2
++ V
Sbjct: 181 SNSGV 185