BLASTX nr result

ID: Rehmannia31_contig00002898 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00002898
         (1357 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygro...    45   2e-08

>gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygrometricum]
          Length = 250

 Score = 45.4 bits (106), Expect(2) = 2e-08
 Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 7/64 (10%)
 Frame = -1

Query: 1255 VQIKGGKRRFYKDIFTVLKLTADEELIKKYCEISLEGQQSDIFSRL---KSGDF----GV 1097
            VQ++  + R +  ++TV+KL  D  +++K+C  + E Q+SD+ S+L   ++GDF      
Sbjct: 141  VQVRQDQIRGFNGLYTVVKLNTDHNMVEKFCGETFESQESDVLSKLNISEAGDFKEVISS 200

Query: 1096 EDEV 1085
            EDEV
Sbjct: 201  EDEV 204



 Score = 43.5 bits (101), Expect(2) = 2e-08
 Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
 Frame = -2

Query: 993 SSDDEVTTPLKKAKFISDETIQG--SGLKRRLLDEFSSTGKEKKLDIDIKQEKD 838
           SS+DEV+TP+K  K  ++E  +G  +  KR L DEFS+T   KKL   IK E+D
Sbjct: 199 SSEDEVSTPVKSTK--NEENSKGIMNETKRALTDEFSATAPNKKLKTIIKTEED 250


Top