BLASTX nr result
ID: Rehmannia31_contig00002187
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00002187
(5435 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011099129.1| DNA-directed RNA polymerase II subunit 1 [Se... 2971 0.0
gb|PIN22778.1| RNA polymerase II, large subunit [Handroanthus im... 2967 0.0
ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II su... 2946 0.0
ref|XP_011073958.1| LOW QUALITY PROTEIN: DNA-directed RNA polyme... 2930 0.0
ref|XP_016560439.1| PREDICTED: DNA-directed RNA polymerase II su... 2888 0.0
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su... 2883 0.0
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su... 2880 0.0
ref|XP_016440712.1| PREDICTED: DNA-directed RNA polymerase II su... 2877 0.0
ref|XP_009594602.1| PREDICTED: DNA-directed RNA polymerase II su... 2877 0.0
ref|XP_019228036.1| PREDICTED: DNA-directed RNA polymerase II su... 2873 0.0
ref|XP_016502102.1| PREDICTED: DNA-directed RNA polymerase II su... 2871 0.0
ref|XP_009776334.1| PREDICTED: DNA-directed RNA polymerase II su... 2871 0.0
gb|PHT56449.1| DNA-directed RNA polymerase II subunit RPB1 [Caps... 2855 0.0
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 2851 0.0
ref|XP_019182613.1| PREDICTED: DNA-directed RNA polymerase II su... 2835 0.0
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 2829 0.0
gb|OVA15969.1| RNA polymerase II [Macleaya cordata] 2826 0.0
ref|XP_017252141.1| PREDICTED: DNA-directed RNA polymerase II su... 2817 0.0
ref|XP_022034547.1| DNA-directed RNA polymerase II subunit 1 [He... 2816 0.0
gb|PKI74424.1| hypothetical protein CRG98_005188 [Punica granatum] 2809 0.0
>ref|XP_011099129.1| DNA-directed RNA polymerase II subunit 1 [Sesamum indicum]
Length = 1848
Score = 2971 bits (7702), Expect = 0.0
Identities = 1480/1525 (97%), Positives = 1505/1525 (98%), Gaps = 2/1525 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AK+RVVQFGILSPDEIRQMSVVHIEHSETTERGKPK GGLSDPRLGTIDRKMKCETCMAN
Sbjct: 13 AKIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTIDRKMKCETCMAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MA+CPGHFGHLELAKPMFHIGFMKTVLSILR VCFNCSKILADEEDPKFKQA+RIRNPKN
Sbjct: 73 MADCPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEDPKFKQALRIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RL+KILDACKNKSKCEGGDEIDVQGQD+ EP+KK+RGGCGAQQPKISIDGMKMVAEYK+Q
Sbjct: 133 RLKKILDACKNKSKCEGGDEIDVQGQDTDEPVKKTRGGCGAQQPKISIDGMKMVAEYKIQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
KKKNDDPEQMPEPVERKQ LSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVL
Sbjct: 193 KKKNDDPEQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFH+AT
Sbjct: 253 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQRLDLRYLK
Sbjct: 373 ELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH+IKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHKIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQE+E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQESE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF
Sbjct: 673 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQPLESLKLK+ DFN
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKKADFN 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
DMY+YEIDN NWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR+QLGTEIATTGDNS
Sbjct: 913 DMYRYEIDNANWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQLGTEIATTGDNS 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WPLPVNI+RLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN
Sbjct: 973 WPLPVNIRRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEIDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1272
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDEN+GFKAENEWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKAENEWMLDTEGVN 1332
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1392
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQ 1452
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYME-GGLDFGMTPARSPLTGTPYHDGMMSPNY 4494
LAPIGTGDCAL LNEEMLKQAIEIPLPSYME GGL+FGMTPARSPLTGTPYHDGMMSP+Y
Sbjct: 1453 LAPIGTGDCALYLNEEMLKQAIEIPLPSYMEGGGLEFGMTPARSPLTGTPYHDGMMSPSY 1512
Query: 4495 LLSPNLRLSPVTDAQFSPYVGGMAF 4569
LLSPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1513 LLSPNLRLSPVTDAQFSPYVGGMAF 1537
>gb|PIN22778.1| RNA polymerase II, large subunit [Handroanthus impetiginosus]
Length = 1847
Score = 2967 bits (7693), Expect = 0.0
Identities = 1475/1524 (96%), Positives = 1503/1524 (98%), Gaps = 1/1524 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVR+VQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN
Sbjct: 13 AKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMKTVLSILR VCFNCSKILADEE+PKFKQA+RIRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEEPKFKQALRIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RL+KILDACKNK+KCEGGDEIDVQGQD+ EP+KKSRGGCGAQQPKISIDGMKMVAEYKLQ
Sbjct: 133 RLKKILDACKNKAKCEGGDEIDVQGQDTDEPVKKSRGGCGAQQPKISIDGMKMVAEYKLQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
KKKNDD EQ+PEPVERKQ LSAEKVLSILKRITDEDCQLLGLNPK+ARPDWMILQVL
Sbjct: 193 KKKNDDQEQLPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFARPDWMILQVLPVP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFH+AT
Sbjct: 253 PPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
+LGVPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIRDDGQRLDLRYLK
Sbjct: 373 ELGVPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDMHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQE+E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQESE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVK+LIRAAQEKQLEAEPGRTMMESF
Sbjct: 673 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKDLIRAAQEKQLEAEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLK++DFN
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKKSDFN 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
DMYKYEID+PNWNP+YMLPEAVEDLKTIREIRSVFDAEVQKLEADR+QLGTEIATTGDNS
Sbjct: 913 DMYKYEIDSPNWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQLGTEIATTGDNS 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WPLPVNI+RLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN
Sbjct: 973 WPLPVNIRRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRSALASKRVLKEYRLTREAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSALASKRVLKEYRLTREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDV KTKERAKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVGKTKERAKN 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEIDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINQEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 1272
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKF+EN+GFKAENEWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFEENEGFKAENEWMLDTEGVN 1332
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVMCHEDVD+RRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEDVDSRRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 1392
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDSLRGVTENIMLGQ 1452
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 4497
LAPIGTGDC+L LNEEMLK AIEIPLP YMEGGLDFGMTPARSPLTGTPYHDGMMSP+YL
Sbjct: 1453 LAPIGTGDCSLYLNEEMLKNAIEIPLPGYMEGGLDFGMTPARSPLTGTPYHDGMMSPSYL 1512
Query: 4498 LSPNLRLSPVTDAQFSPYVGGMAF 4569
LSPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1513 LSPNLRLSPVTDAQFSPYVGGMAF 1536
>ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Erythranthe
guttata]
gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Erythranthe guttata]
Length = 1842
Score = 2946 bits (7638), Expect = 0.0
Identities = 1470/1525 (96%), Positives = 1493/1525 (97%), Gaps = 2/1525 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN
Sbjct: 13 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADEE+PKFKQAMRIRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPKFKQAMRIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RLRKILDACKNK+KC+GGDEID QD+E P+KKSRGGCGAQQPKISIDGMKMVAEYKLQ
Sbjct: 133 RLRKILDACKNKTKCDGGDEIDGHSQDTEEPVKKSRGGCGAQQPKISIDGMKMVAEYKLQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
KKK+DD +QMPEPVERKQ LSAEKVLSILKRITDEDCQLLGLNPK+ARPDWMILQVL
Sbjct: 193 KKKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFARPDWMILQVLPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT
Sbjct: 253 PPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK
Sbjct: 373 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQE E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQETE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
KGFITPGDTQVRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQNAFS+GIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLE EPGRTMMESF
Sbjct: 673 YWLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEPEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQPLESLKLK++DFN
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKKSDFN 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
DMYKYEIDN NWNPNYMLPEAVEDLKTIREIRSVFDAEV KLE DRFQLGTEIATTGDNS
Sbjct: 913 DMYKYEIDNSNWNPNYMLPEAVEDLKTIREIRSVFDAEVTKLEVDRFQLGTEIATTGDNS 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLS EAQKN
Sbjct: 973 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSTEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKE+AKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKEKAKN 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEIDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNAEKLILRIRIMN++APKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINTEFSDDLTCIFNDDNAEKLILRIRIMNEQAPKGELADE 1272
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIE NMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 1332
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVMCHE+VD RRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEEVDVRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1392
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 1452
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 4497
LAPIGTGDCALLLNE+MLKQAIEIPLPSYMEGGL+FGMTP RSP +GTPYHDGMMSPNYL
Sbjct: 1453 LAPIGTGDCALLLNEQMLKQAIEIPLPSYMEGGLEFGMTPGRSPHSGTPYHDGMMSPNYL 1512
Query: 4498 L-SPNLRLSPVTDAQFSPYVGGMAF 4569
L SPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1513 LMSPNLRLSPVTDAQFSPYVGGMAF 1537
>ref|XP_011073958.1| LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit 1-like
[Sesamum indicum]
Length = 1843
Score = 2930 bits (7597), Expect = 0.0
Identities = 1456/1528 (95%), Positives = 1495/1528 (97%), Gaps = 5/1528 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIG----GLSDPRLGTIDRKMKCET 168
AKVRVVQFGI+SPDEIRQMSVVHIEH ET ERGKPKIG GLSD RLGTI +KMKCET
Sbjct: 13 AKVRVVQFGIISPDEIRQMSVVHIEHGETMERGKPKIGMXICGLSDLRLGTIGKKMKCET 72
Query: 169 CMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIR 348
CM+NMAECPGHFGHLELAKPMFHIGFMK VLSILRSVCFNCSKILADE+DPKFKQAMRIR
Sbjct: 73 CMSNMAECPGHFGHLELAKPMFHIGFMKVVLSILRSVCFNCSKILADEDDPKFKQAMRIR 132
Query: 349 NPKNRLRKILDACKNKSKCEGGDEIDVQGQD-SEPLKKSRGGCGAQQPKISIDGMKMVAE 525
NPKNRLRKILDACKNKSKC+GGDEIDV+GQ+ EP+KKSRGGCGAQQPKISIDGMKMVAE
Sbjct: 133 NPKNRLRKILDACKNKSKCDGGDEIDVRGQEPDEPVKKSRGGCGAQQPKISIDGMKMVAE 192
Query: 526 YKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQV 705
YK+QKKKNDD +QMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQV
Sbjct: 193 YKIQKKKNDDQDQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQV 252
Query: 706 LXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQF 885
L SVMMDTS+RSEDDLTHQLAMIIRHNENLK QERNGAPAHIISEFAQLLQF
Sbjct: 253 LPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKLQERNGAPAHIISEFAQLLQF 312
Query: 886 HVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPT 1065
HVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPT
Sbjct: 313 HVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPT 372
Query: 1066 INIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDL 1245
INIDQLGVPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIRDDGQRLDL
Sbjct: 373 INIDQLGVPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDL 432
Query: 1246 RYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVT 1425
RYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVT
Sbjct: 433 RYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVT 492
Query: 1426 SPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKIT 1605
SPYNADFDGDEMNMHVPQSFETRAEV+ELM+VPKCIVSPQ+NRPVMGIVQDTLLGCRKIT
Sbjct: 493 SPYNADFDGDEMNMHVPQSFETRAEVMELMLVPKCIVSPQSNRPVMGIVQDTLLGCRKIT 552
Query: 1606 KRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWH 1785
KRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQINLLRYSAWH
Sbjct: 553 KRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLLRYSAWH 612
Query: 1786 QENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQ 1965
QE EKG+ITPGDTQVRIEKG+LLSGTLCKK LGTSTGSLIHVIWEEVGPDAARKFLGHTQ
Sbjct: 613 QETEKGYITPGDTQVRIEKGDLLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQ 672
Query: 1966 WLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTM 2145
WLVNYWLLQNAFS+GIGDTIADAATMEKINETISNAKN+VKELIRAAQEKQLEAEPGRTM
Sbjct: 673 WLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNQVKELIRAAQEKQLEAEPGRTM 732
Query: 2146 MESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNV 2325
MESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNV
Sbjct: 733 MESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNV 792
Query: 2326 EGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 2505
EGKRIPFGFVDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
Sbjct: 793 EGKRIPFGFVDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 852
Query: 2506 TSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKR 2685
TSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQPLESLKLK+
Sbjct: 853 TSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKK 912
Query: 2686 TDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATT 2865
+DFNDMYKYEID+ NWNP+YMLPEAVEDLKTIREIRSVFDAEVQKLEADR+QLGTEIATT
Sbjct: 913 SDFNDMYKYEIDSTNWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQLGTEIATT 972
Query: 2866 GDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSME 3045
GDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSME
Sbjct: 973 GDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSME 1032
Query: 3046 AQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAA 3225
AQKNATLFFNILLRSALASKRVLKEYRLTREAF+WVIGEIESRFLQSLVAAGEMIGCVAA
Sbjct: 1033 AQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAAGEMIGCVAA 1092
Query: 3226 QSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKE 3405
QSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL+PDVSKTKE
Sbjct: 1093 QSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLRPDVSKTKE 1152
Query: 3406 RAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPW 3585
RAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEIDP KISPW
Sbjct: 1153 RAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEIDPHKISPW 1212
Query: 3586 LLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE 3765
LLR+ELNREMMVDKKLSMADIAEKINLEF+DDLTCIFNDDNAEKLILRIRIMNDEAPKGE
Sbjct: 1213 LLRVELNREMMVDKKLSMADIAEKINLEFEDDLTCIFNDDNAEKLILRIRIMNDEAPKGE 1272
Query: 3766 LNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDT 3945
L DESAEDDVFLKK+ESNMLTEMALRGIPDINKVFIKN K+NKFDEN+GFKAENEWMLDT
Sbjct: 1273 LQDESAEDDVFLKKVESNMLTEMALRGIPDINKVFIKNGKVNKFDENEGFKAENEWMLDT 1332
Query: 3946 EGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHL 4125
EGVNLLAV CHEDVD+RRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHL
Sbjct: 1333 EGVNLLAVACHEDVDSRRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHL 1392
Query: 4126 AILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENI 4305
AILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE DCLRGVTENI
Sbjct: 1393 AILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAEMDCLRGVTENI 1452
Query: 4306 MLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMS 4485
MLGQLAPIGTGDC LLLNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP+TGTPYHDGMMS
Sbjct: 1453 MLGQLAPIGTGDCGLLLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPVTGTPYHDGMMS 1512
Query: 4486 PNYLLSPNLRLSPVTDAQFSPYVGGMAF 4569
P+YLLSPNLRLSPV+DAQFSPYVGGMAF
Sbjct: 1513 PSYLLSPNLRLSPVSDAQFSPYVGGMAF 1540
>ref|XP_016560439.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Capsicum annuum]
gb|PHT91022.1| DNA-directed RNA polymerase II subunit RPB1 [Capsicum annuum]
gb|PHU26901.1| DNA-directed RNA polymerase II subunit RPB1 [Capsicum chinense]
Length = 1846
Score = 2888 bits (7486), Expect = 0.0
Identities = 1434/1524 (94%), Positives = 1482/1524 (97%), Gaps = 1/1524 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTIDRKMKCETCMAN
Sbjct: 13 AKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCMAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADEEDPKFKQAMRIRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEEDPKFKQAMRIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RLRK+LDACKNK+KCEGGDEIDVQ QD+E P++KSRGGCGAQQPKISIDGMKMVAEYK+Q
Sbjct: 133 RLRKMLDACKNKTKCEGGDEIDVQSQDTEEPVRKSRGGCGAQQPKISIDGMKMVAEYKMQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
KKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YARPDWMILQ L
Sbjct: 193 KKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYARPDWMILQALPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFH+AT
Sbjct: 253 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
QLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQRLDLRYLK
Sbjct: 373 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRK+TKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWH ++E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
KG+ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQ AFSIGIGDTIADAATMEKINETISNAK++VKELI+AAQEKQLEAEPGRTMMESF
Sbjct: 673 YWLLQQAFSIGIGDTIADAATMEKINETISNAKSKVKELIKAAQEKQLEAEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
ENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE+Q L+SLK K++ F
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKSTFE 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
DMY YEID+PNWNP+YML EAVEDLK IREIRSVFDAEVQKLEADR QLGTEIA TGDNS
Sbjct: 913 DMYAYEIDDPNWNPSYMLLEAVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNS 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WPLPVNI+RLVLNAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV GDDYLSMEAQKN
Sbjct: 973 WPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRSALASKRVLKEYRL+REAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V KTKERAK
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKT 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DE 1271
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKAENEWMLDTEGVN
Sbjct: 1272 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKAENEWMLDTEGVN 1331
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1332 LLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILC 1391
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D L+GVTENIMLGQ
Sbjct: 1392 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDYLKGVTENIMLGQ 1451
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 4497
LAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GTPYHDGMMSPNYL
Sbjct: 1452 LAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPYHDGMMSPNYL 1511
Query: 4498 LSPNLRLSPVTDAQFSPYVGGMAF 4569
LSPN+R+SP+TDAQFSPYVGGMAF
Sbjct: 1512 LSPNMRMSPMTDAQFSPYVGGMAF 1535
>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
lycopersicum]
ref|XP_015065639.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
pennellii]
Length = 1846
Score = 2883 bits (7473), Expect = 0.0
Identities = 1430/1524 (93%), Positives = 1480/1524 (97%), Gaps = 1/1524 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTIDRKMKCETCMAN
Sbjct: 13 AKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCMAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPKFKQAMRIRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPKFKQAMRIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RLRK+LDACKNK+KCEGGDEIDVQGQD+E P+KKSRGGCGAQQPKISIDGMKMVAEYK+Q
Sbjct: 133 RLRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISIDGMKMVAEYKMQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
KKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP++ARPDWMILQ L
Sbjct: 193 KKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFARPDWMILQALPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFH+AT
Sbjct: 253 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
QLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQRLDLRYLK
Sbjct: 373 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRK+TKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQINLLRYSAWH ++E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
KG+ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQ AFSIGIGDTIADA+TMEKINETISNAK +VKELI+AAQEK LEAEPGRTMMESF
Sbjct: 673 YWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLLEAEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
ENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE+Q L+SLK K+ F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKGTFD 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
DMY YEID+PNWNP+YMLPEAVEDLK IREIRSVFDAEVQKLEADR QLGTEIA TGDNS
Sbjct: 913 DMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNS 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WPLPVNI+RLVLNAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV GDDYLSMEAQKN
Sbjct: 973 WPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRSALASKRVLKEYRL+REAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V KTKERAK
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKT 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DE 1271
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKAENEWMLDTEGVN
Sbjct: 1272 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKAENEWMLDTEGVN 1331
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1332 LLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1391
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D LRGVTENIMLGQ
Sbjct: 1392 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDHLRGVTENIMLGQ 1451
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 4497
LAPIGTG C+L LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GTPYHDGMMSPNYL
Sbjct: 1452 LAPIGTGGCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPYHDGMMSPNYL 1511
Query: 4498 LSPNLRLSPVTDAQFSPYVGGMAF 4569
LSPN+R+SP+TDAQFSPYVGGMAF
Sbjct: 1512 LSPNMRMSPITDAQFSPYVGGMAF 1535
>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
tuberosum]
Length = 1839
Score = 2880 bits (7466), Expect = 0.0
Identities = 1428/1524 (93%), Positives = 1479/1524 (97%), Gaps = 1/1524 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTIDRKMKCETCMAN
Sbjct: 13 AKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCMAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPKFKQAMRIRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPKFKQAMRIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RLRK+LDACKNK+KCEGGDEIDVQG D+E P+KKSRGGCGAQQPKISIDGMKMVAEYK+Q
Sbjct: 133 RLRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISIDGMKMVAEYKMQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
KKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP++ARPDWMILQ L
Sbjct: 193 KKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFARPDWMILQALPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFH+AT
Sbjct: 253 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
QLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQRLDLRYLK
Sbjct: 373 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRK+TKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQINLLRYSAWH ++E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
KG+ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQ AFSIGIGDTIADA+TMEKINETISNAK +VKELI+AAQEK LEAEPGRTMMESF
Sbjct: 673 YWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLLEAEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
ENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE+Q L+SLK K+ F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKGTFD 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
DMY YEID+PNWNP+YMLPEAVEDLK IREIRSVFDAEVQKLEADR QLGTEIA TGDNS
Sbjct: 913 DMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNS 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WPLPVNI+RLVLNAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV GDDYLSMEAQKN
Sbjct: 973 WPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRSALASKRVLKEYRL+REAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V KTKERAK
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKT 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEKIN+EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DE 1271
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKAENEWMLDTEGVN
Sbjct: 1272 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKAENEWMLDTEGVN 1331
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1332 LLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1391
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D LRGVTENIMLGQ
Sbjct: 1392 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDHLRGVTENIMLGQ 1451
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 4497
LAPIGTG C+L LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GTPYHDGMMSPNYL
Sbjct: 1452 LAPIGTGSCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPYHDGMMSPNYL 1511
Query: 4498 LSPNLRLSPVTDAQFSPYVGGMAF 4569
LSPN+R+SP+TDAQFSPYVGGMAF
Sbjct: 1512 LSPNMRMSPITDAQFSPYVGGMAF 1535
>ref|XP_016440712.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like, partial
[Nicotiana tabacum]
Length = 1630
Score = 2877 bits (7459), Expect = 0.0
Identities = 1429/1524 (93%), Positives = 1482/1524 (97%), Gaps = 1/1524 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTIDRKMKCETCMAN
Sbjct: 13 AKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCMAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPKFKQAMRIRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPKFKQAMRIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISIDGMKMVAEYKLQ
Sbjct: 133 RLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISIDGMKMVAEYKLQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
KKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YARPDWMILQVL
Sbjct: 193 KKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYARPDWMILQVLPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFH+AT
Sbjct: 253 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
QLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQRLDLRYLK
Sbjct: 373 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWH ++E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
KG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQLEAEPGRTMMESF
Sbjct: 673 YWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQLEAEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
ENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q L+SLK K+ F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKAKKLTFD 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
DMY YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR QLGTEIA TGDNS
Sbjct: 913 DMYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQLGTEIAVTGDNS 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV GDDYLSMEAQKN
Sbjct: 973 WPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V KTKERAK
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKT 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DE 1271
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKAE EWMLDTEGVN
Sbjct: 1272 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKAETEWMLDTEGVN 1331
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVM HEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1332 LLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1391
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D LRGVTENIMLGQ
Sbjct: 1392 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQ 1451
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 4497
LAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GTPYHDGMMSPNYL
Sbjct: 1452 LAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPYHDGMMSPNYL 1511
Query: 4498 LSPNLRLSPVTDAQFSPYVGGMAF 4569
LSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1512 LSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_009594602.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
tomentosiformis]
Length = 1846
Score = 2877 bits (7459), Expect = 0.0
Identities = 1429/1524 (93%), Positives = 1482/1524 (97%), Gaps = 1/1524 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTIDRKMKCETCMAN
Sbjct: 13 AKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCMAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPKFKQAMRIRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPKFKQAMRIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISIDGMKMVAEYKLQ
Sbjct: 133 RLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISIDGMKMVAEYKLQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
KKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YARPDWMILQVL
Sbjct: 193 KKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYARPDWMILQVLPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFH+AT
Sbjct: 253 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
QLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQRLDLRYLK
Sbjct: 373 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWH ++E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
KG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQLEAEPGRTMMESF
Sbjct: 673 YWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQLEAEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
ENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q L+SLK K+ F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKAKKLTFD 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
DMY YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR QLGTEIA TGDNS
Sbjct: 913 DMYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQLGTEIAVTGDNS 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV GDDYLSMEAQKN
Sbjct: 973 WPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V KTKERAK
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKT 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DE 1271
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKAE EWMLDTEGVN
Sbjct: 1272 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKAETEWMLDTEGVN 1331
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVM HEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1332 LLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1391
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D LRGVTENIMLGQ
Sbjct: 1392 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQ 1451
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 4497
LAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GTPYHDGMMSPNYL
Sbjct: 1452 LAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPYHDGMMSPNYL 1511
Query: 4498 LSPNLRLSPVTDAQFSPYVGGMAF 4569
LSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1512 LSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_019228036.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
attenuata]
gb|OIT31005.1| dna-directed rna polymerase ii subunit 1 [Nicotiana attenuata]
Length = 1853
Score = 2873 bits (7449), Expect = 0.0
Identities = 1426/1524 (93%), Positives = 1482/1524 (97%), Gaps = 1/1524 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTIDRKMKCETCMAN
Sbjct: 13 AKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCMAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPKFKQAMRIRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPKFKQAMRIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISIDGMKMVAEYKLQ
Sbjct: 133 RLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISIDGMKMVAEYKLQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
KKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YARPDWMILQVL
Sbjct: 193 KKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYARPDWMILQVLPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFH+AT
Sbjct: 253 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
QLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQRLDLRYLK
Sbjct: 373 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWH ++E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
KG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQLEAEPGRTMMESF
Sbjct: 673 YWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQLEAEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
ENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q L+SLK K++ F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKAKKSTFD 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
D+Y YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR QLGTEIA TGDNS
Sbjct: 913 DLYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQLGTEIAVTGDNS 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV GDDYLSMEAQKN
Sbjct: 973 WPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V KTKERAK
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKT 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DE 1271
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKAE EWMLDTEGVN
Sbjct: 1272 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKAETEWMLDTEGVN 1331
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1332 LLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1391
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D LRGVTENIMLGQ
Sbjct: 1392 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQ 1451
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 4497
LAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GTPYHDGMMSPNYL
Sbjct: 1452 LAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPYHDGMMSPNYL 1511
Query: 4498 LSPNLRLSPVTDAQFSPYVGGMAF 4569
LSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1512 LSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_016502102.1| PREDICTED: DNA-directed RNA polymerase II subunit 1, partial
[Nicotiana tabacum]
Length = 1623
Score = 2871 bits (7442), Expect = 0.0
Identities = 1426/1524 (93%), Positives = 1481/1524 (97%), Gaps = 1/1524 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTIDRKMKCETCMAN
Sbjct: 13 AKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCMAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPKFKQAMRIRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPKFKQAMRIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISIDGMKMVAEYKLQ
Sbjct: 133 RLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISIDGMKMVAEYKLQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
KKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YARPDWMILQVL
Sbjct: 193 KKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYARPDWMILQVLPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFH+AT
Sbjct: 253 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
QLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQRLDLRYLK
Sbjct: 373 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWH ++E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
KG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQLEAEPGRTMMESF
Sbjct: 673 YWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQLEAEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
ENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q L+SLK K++ F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKAKKSTFD 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
D+Y YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR QLGTEIA TGDNS
Sbjct: 913 DLYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQLGTEIAVTGDNS 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV GDDYLSMEAQKN
Sbjct: 973 WPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V KTKERAK
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKT 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DE 1271
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKAE EWMLDTEGVN
Sbjct: 1272 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKAETEWMLDTEGVN 1331
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1332 LLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1391
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D LRGVTENIMLGQ
Sbjct: 1392 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQ 1451
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 4497
LAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GTPY DGMMSPNYL
Sbjct: 1452 LAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPYPDGMMSPNYL 1511
Query: 4498 LSPNLRLSPVTDAQFSPYVGGMAF 4569
LSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1512 LSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_009776334.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
sylvestris]
Length = 1846
Score = 2871 bits (7442), Expect = 0.0
Identities = 1426/1524 (93%), Positives = 1481/1524 (97%), Gaps = 1/1524 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTIDRKMKCETCMAN
Sbjct: 13 AKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCMAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPKFKQAMRIRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPKFKQAMRIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISIDGMKMVAEYKLQ
Sbjct: 133 RLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISIDGMKMVAEYKLQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
KKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YARPDWMILQVL
Sbjct: 193 KKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYARPDWMILQVLPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFH+AT
Sbjct: 253 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
QLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQRLDLRYLK
Sbjct: 373 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWH ++E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
KG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 KGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQLEAEPGRTMMESF
Sbjct: 673 YWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQLEAEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
ENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q L+SLK K++ F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKAKKSTFD 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
D+Y YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR QLGTEIA TGDNS
Sbjct: 913 DLYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQLGTEIAVTGDNS 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV GDDYLSMEAQKN
Sbjct: 973 WPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V KTKERAK
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKT 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DE 1271
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKAE EWMLDTEGVN
Sbjct: 1272 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKAETEWMLDTEGVN 1331
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1332 LLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1391
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D LRGVTENIMLGQ
Sbjct: 1392 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQ 1451
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 4497
LAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GTPY DGMMSPNYL
Sbjct: 1452 LAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPYPDGMMSPNYL 1511
Query: 4498 LSPNLRLSPVTDAQFSPYVGGMAF 4569
LSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1512 LSPNMRMSPITDAQFSPYVDKMAF 1535
>gb|PHT56449.1| DNA-directed RNA polymerase II subunit RPB1 [Capsicum baccatum]
Length = 1816
Score = 2855 bits (7402), Expect = 0.0
Identities = 1417/1506 (94%), Positives = 1464/1506 (97%), Gaps = 1/1506 (0%)
Frame = +1
Query: 55 MSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMAECPGHFGHLELAKPMF 234
MSVVHIEH ETTERGKPK GGLSDPRLGTIDRKMKCETCMANMAECPGHFGHLELAKPMF
Sbjct: 1 MSVVHIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCMANMAECPGHFGHLELAKPMF 60
Query: 235 HIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKNRLRKILDACKNKSKCEGG 414
HIGFMK VLSILR VCFNCSKILADEEDPKFKQAMRIRNPKNRLRK+LDACKNK+KCEGG
Sbjct: 61 HIGFMKPVLSILRCVCFNCSKILADEEDPKFKQAMRIRNPKNRLRKMLDACKNKTKCEGG 120
Query: 415 DEIDVQGQDSE-PLKKSRGGCGAQQPKISIDGMKMVAEYKLQKKKNDDPEQMPEPVERKQ 591
DEIDVQ QD+E P++KSRGGCGAQQPKISIDGMKMVAEYK+QKKK+DDPEQMPEPVERKQ
Sbjct: 121 DEIDVQSQDTEEPVRKSRGGCGAQQPKISIDGMKMVAEYKMQKKKSDDPEQMPEPVERKQ 180
Query: 592 LLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSED 771
LSAE+VLSILKR++DEDC LLGLNP+YARPDWMILQ L SVMMDTS+RSED
Sbjct: 181 QLSAERVLSILKRVSDEDCVLLGLNPEYARPDWMILQALPIPPPPVRPSVMMDTSSRSED 240
Query: 772 DLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRATQRSGR 951
DLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFH+ATYFDN+LPGQPRATQRSGR
Sbjct: 241 DLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIATYFDNDLPGQPRATQRSGR 300
Query: 952 PIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETV 1131
PIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETV
Sbjct: 301 PIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETV 360
Query: 1132 TPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLN 1311
TPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLN
Sbjct: 361 TPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLN 420
Query: 1312 DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFET 1491
DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFET
Sbjct: 421 DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFET 480
Query: 1492 RAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFD 1671
RAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRK+TKRDTFIEKDVFMNILMWWEDFD
Sbjct: 481 RAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFD 540
Query: 1672 GKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENEKGFITPGDTQVRIEKGEL 1851
GKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWH ++EKG+ITPGDTQVRIEKGEL
Sbjct: 541 GKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSEKGYITPGDTQVRIEKGEL 600
Query: 1852 LSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIAD 2031
LSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ AFSIGIGDTIAD
Sbjct: 601 LSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIGDTIAD 660
Query: 2032 AATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSS 2211
AATMEKINETISNAK++VKELI+AAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSS
Sbjct: 661 AATMEKINETISNAKSKVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSS 720
Query: 2212 AQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDY 2391
A+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF+DRTLPHFTKDDY
Sbjct: 721 AEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDY 780
Query: 2392 GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKY 2571
GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKY
Sbjct: 781 GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKY 840
Query: 2572 DGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFNDMYKYEIDNPNWNPNYML 2751
DGTVRNSLGDVIQFLYGEDGMDSVWIE+Q L+SLK K++ F DMY YEID+PNWNP+YML
Sbjct: 841 DGTVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKSTFEDMYAYEIDDPNWNPSYML 900
Query: 2752 PEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTF 2931
EAVEDLK IREIRSVFDAEVQKLEADR QLGTEIA TGDNSWPLPVNI+RLVLNAQKTF
Sbjct: 901 LEAVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNSWPLPVNIQRLVLNAQKTF 960
Query: 2932 KVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKNATLFFNILLRSALASKRV 3111
K+DFRRPSDMHPMEIVEAVDKLQERLKVV GDDYLSMEAQKNATLFFNILLRSALASKRV
Sbjct: 961 KIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKNATLFFNILLRSALASKRV 1020
Query: 3112 LKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 3291
LKEYRL+REAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSA
Sbjct: 1021 LKEYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 1080
Query: 3292 KNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKNVQCALEYTTLRSVTQATE 3471
KNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V KTKERAK VQCALEYTTLRSVTQATE
Sbjct: 1081 KNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKTVQCALEYTTLRSVTQATE 1140
Query: 3472 VWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIA 3651
VWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIA
Sbjct: 1141 VWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIA 1200
Query: 3652 EKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTE 3831
EKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DESAEDDVFLKKIESNMLTE
Sbjct: 1201 EKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DESAEDDVFLKKIESNMLTE 1259
Query: 3832 MALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVNLLAVMCHEDVDARRTTSN 4011
MALRGIPDINKVFIKNSK+ KFD+N+GFKAENEWMLDTEGVNLLAVM HEDVDA RTTSN
Sbjct: 1260 MALRGIPDINKVFIKNSKVQKFDDNEGFKAENEWMLDTEGVNLLAVMTHEDVDASRTTSN 1319
Query: 4012 HLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGIN 4191
HLIEVIEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGIN
Sbjct: 1320 HLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGIN 1379
Query: 4192 RNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQLAPIGTGDCALLLNEEML 4371
RNDTGPMMRCSFEETVDILLDAAVFAE+D L+GVTENIMLGQLAPIGTG CAL LNEEML
Sbjct: 1380 RNDTGPMMRCSFEETVDILLDAAVFAESDYLKGVTENIMLGQLAPIGTGGCALYLNEEML 1439
Query: 4372 KQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYLLSPNLRLSPVTDAQFSPY 4551
KQAIEIPLPSYMEGGL+FGMTP RSP++GTPYHDGMMSPNYLLSPN+R+SP+TDAQFSPY
Sbjct: 1440 KQAIEIPLPSYMEGGLEFGMTPGRSPISGTPYHDGMMSPNYLLSPNMRMSPMTDAQFSPY 1499
Query: 4552 VGGMAF 4569
VGGMAF
Sbjct: 1500 VGGMAF 1505
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 2851 bits (7391), Expect = 0.0
Identities = 1411/1524 (92%), Positives = 1473/1524 (96%), Gaps = 1/1524 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVR+VQFGILSPDEIRQMSVV IEHSETTERGKPK GGLSDPRLGTIDRKMKCETC AN
Sbjct: 13 AKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTIDRKMKCETCTAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED KFKQA +IRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHKFKQAQKIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RL+KILDACKNKSKCEGGDEI+ Q DS EP+KKSRGGCGAQQPK++I+GMKM+AEYK+Q
Sbjct: 133 RLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTIEGMKMIAEYKIQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
+KKNDDPEQ+PEPVERKQ LSAE+VL++LKRI+DEDC LLGLNPKYARPDWMILQVL
Sbjct: 193 RKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYARPDWMILQVLPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQLLQFHVAT
Sbjct: 253 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLK
Sbjct: 373 ELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQINLLR SAWH E+E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
GFITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 TGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQN FSIGIGDTIADAATMEKINETIS AKNEVKELIRAAQE+QLEAEPGRTMMESF
Sbjct: 673 YWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQLEAEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q L+SLK+K+ +F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKGEFD 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
++KYEID+ NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADRFQLGTEIATTGDNS
Sbjct: 913 RVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNS 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV GDD +SMEAQKN
Sbjct: 973 WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLISMEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRS ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FVKSYYEMPDEE+ P+KISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEVAPEKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELQDE 1272
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDE++GFK E EWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKPEVEWMLDTEGVN 1332
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1392
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDFLRGVTENIMLGQ 1452
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 4497
LAPIGTGDCAL LN++ML+ AIE+ LPSYME GLDFGMTP+RSP+TGTPYHDGMMSPNYL
Sbjct: 1453 LAPIGTGDCALYLNDQMLQHAIELQLPSYME-GLDFGMTPSRSPITGTPYHDGMMSPNYL 1511
Query: 4498 LSPNLRLSPVTDAQFSPYVGGMAF 4569
LSPNLRLSP+TDAQFSPYVGGMAF
Sbjct: 1512 LSPNLRLSPITDAQFSPYVGGMAF 1535
>ref|XP_019182613.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Ipomoea nil]
Length = 1832
Score = 2835 bits (7349), Expect = 0.0
Identities = 1403/1525 (92%), Positives = 1470/1525 (96%), Gaps = 2/1525 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVR+VQFGILSPDEIRQMSVVHIEHSETTERGKPK GGLSD RLGTIDRK+KCETCMAN
Sbjct: 13 AKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDQRLGTIDRKLKCETCMAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMKTVLSILR VCFNCSKILADE++PKFKQAMRIRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEDEPKFKQAMRIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
+L+KILDACKNK+KCEGGDEI++QGQDSE P+KK +GGCGAQQPKISIDGMKMVAEYKLQ
Sbjct: 133 KLKKILDACKNKTKCEGGDEINLQGQDSEEPVKKPKGGCGAQQPKISIDGMKMVAEYKLQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
KKKNDDPEQMPEPVERKQ L+AEKVLSILKRI+DEDCQLLGLNPKYARPDWMILQVL
Sbjct: 193 KKKNDDPEQMPEPVERKQQLTAEKVLSILKRISDEDCQLLGLNPKYARPDWMILQVLPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTS+RSEDDLTHQLAM+IRHNENLKRQERNGAPAHIISEFAQLLQFH+AT
Sbjct: 253 PPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIISEFAQLLQFHIAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
QLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQRLDLRYLK
Sbjct: 373 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRK+TKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWH + E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHSDAE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
G+ITPGDTQVRIEKGELLSGTLCKK+LGTS+G LIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 TGYITPGDTQVRIEKGELLSGTLCKKSLGTSSGGLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQ FSIGIGDTIAD+ TME IN TIS+AKN+VKELI Q+KQLEAEPGRTM E+F
Sbjct: 673 YWLLQQGFSIGIGDTIADSRTMENINITISDAKNKVKELIDVYQDKQLEAEPGRTMAETF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
ENRVNQVLNKARDDAG+ A+KSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGTFAEKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IPFGF+ RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIGRTLPHFTKDDNGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ LESLK+K++ F
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLESLKVKKSTFE 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
+MYKYEID+PNWNPNYM+P+A++DL+TIREIRSVFDAEVQKLE+DR QLGTEIA GDNS
Sbjct: 913 NMYKYEIDDPNWNPNYMIPDAIDDLRTIREIRSVFDAEVQKLESDRLQLGTEIAVNGDNS 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WPLPVNI+R+VLNAQKTF++DFRRPSDMHPMEIVEAVDKLQERLKVV GDDYLS+EAQKN
Sbjct: 973 WPLPVNIQRMVLNAQKTFRIDFRRPSDMHPMEIVEAVDKLQERLKVVHGDDYLSIEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRSALASKRVLKEYRLTREAF+WVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V+KTKERAK
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVAKTKERAKT 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMSTLI EDVEFVKSYYEMPDE+IDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTLIPEDVEFVKSYYEMPDEDIDPDKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEK+NLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKVNLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDE 1272
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN+K+ KFD N+GFKAE EWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVQKFDMNEGFKAETEWMLDTEGVN 1332
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVMCHEDVDA+RTTSNHLIEVIE+LGIEAVRK+LLDELR VISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEDVDAKRTTSNHLIEVIEILGIEAVRKSLLDELRAVISFDGSYVNYRHLAILC 1392
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE D LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADYLRGVTENIMLGQ 1452
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPY-HDGMMSPNY 4494
LAPIGTGDCAL LNEEMLKQAIEIPLPSYM+GGL+FGMTPARSP++GTPY HDG+MSP
Sbjct: 1453 LAPIGTGDCALYLNEEMLKQAIEIPLPSYMDGGLEFGMTPARSPISGTPYHHDGLMSP-- 1510
Query: 4495 LLSPNLRLSPVTDAQFSPYVGGMAF 4569
+LSPNLR+SP +DAQFSPYV GMAF
Sbjct: 1511 MLSPNLRMSPSSDAQFSPYVTGMAF 1535
>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 2829 bits (7334), Expect = 0.0
Identities = 1395/1524 (91%), Positives = 1471/1524 (96%), Gaps = 1/1524 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
+KVR VQFGILSPD IRQMSVV IEHSETTE+GKPK GGLSD RLGTIDRKMKCETCMAN
Sbjct: 13 SKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTIDRKMKCETCMAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED KFKQA RIRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHKFKQAQRIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RL+K+LDACKNK+KCEGGDEI+VQGQD+ EP+KK RGGCGAQQPK++I+GMKM+AEYK Q
Sbjct: 133 RLKKVLDACKNKTKCEGGDEIEVQGQDTGEPIKKRRGGCGAQQPKLTIEGMKMIAEYKAQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
+KKNDD EQ+PEPVERKQ LSAE+VLS+LKRI+DEDC LLGLNP+YARPDWMILQVL
Sbjct: 193 RKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYARPDWMILQVLPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQLLQFH+AT
Sbjct: 253 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLK
Sbjct: 373 ELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSD HLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQINL+R SAWH E+E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
GFITPGDTQVRIE+GELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 TGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQN FSIGIGDTIADAATMEKINETIS AKNEVKELIRAAQE+QLEAEPGRTMMESF
Sbjct: 673 YWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQLEAEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q L+SLK+++++F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMRKSEFD 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
+++YEID+ NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADR+QLGTEIATTGDN+
Sbjct: 913 KVFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQLGTEIATTGDNN 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV GDD+LSMEAQKN
Sbjct: 973 WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDFLSMEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRS ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V+KTKERAKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKERAKN 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FVKSYYEMPDEE+ P+KISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEVAPEKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELQDE 1272
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDE++GFK E EWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKPEVEWMLDTEGVN 1332
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILC 1392
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETDCLRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDCLRGVTENIMLGQ 1452
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 4497
LAPIGTGDCAL LN++ML+QAIE+ LPSYME GLDFGMTP+RSP+ GTPY++GMMSP+YL
Sbjct: 1453 LAPIGTGDCALYLNDQMLQQAIELQLPSYME-GLDFGMTPSRSPIMGTPYNEGMMSPSYL 1511
Query: 4498 LSPNLRLSPVTDAQFSPYVGGMAF 4569
LSPN RLSP+TDAQFSPYVGGMAF
Sbjct: 1512 LSPNARLSPITDAQFSPYVGGMAF 1535
>gb|OVA15969.1| RNA polymerase II [Macleaya cordata]
Length = 1853
Score = 2826 bits (7325), Expect = 0.0
Identities = 1396/1529 (91%), Positives = 1467/1529 (95%), Gaps = 6/1529 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVR+VQFGILSPDEIRQMSVV IEHSETTERGKPK GGLSDPRLGTIDRKMKCETC AN
Sbjct: 13 AKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTIDRKMKCETCTAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMK VLSI+R VCFNCSKILADEED KFKQ+ RI+NPK+
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHKFKQSQRIKNPKH 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQD-SEPLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RL+K+LDACKNK+KCEGGDEIDVQGQD EP+KKSRGGCGAQQPK++I+GMKM+AEYK Q
Sbjct: 133 RLKKVLDACKNKNKCEGGDEIDVQGQDLEEPVKKSRGGCGAQQPKLTIEGMKMIAEYKAQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
+KKNDD EQ+PEPVERKQ L+AE+VLS+LKRI+DEDC LLGLNP +ARPDWMILQVL
Sbjct: 193 RKKNDDQEQLPEPVERKQQLTAERVLSVLKRISDEDCMLLGLNPMFARPDWMILQVLPIP 252
Query: 718 XXXXXXSVMMDTSARSE-----DDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQ 882
SVMMDTSARSE DDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQLLQ
Sbjct: 253 PPPVRPSVMMDTSARSEASFFYDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQ 312
Query: 883 FHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP 1062
FH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP
Sbjct: 313 FHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP 372
Query: 1063 TINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLD 1242
TINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLD
Sbjct: 373 TINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLD 432
Query: 1243 LRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSV 1422
LRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSV
Sbjct: 433 LRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSV 492
Query: 1423 TSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKI 1602
TSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKI
Sbjct: 493 TSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKI 552
Query: 1603 TKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAW 1782
TKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQINL+R SAW
Sbjct: 553 TKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLMRVSAW 612
Query: 1783 HQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHT 1962
H E+E GFITPGDTQVRIE+GELL+GTLCKK LGTSTGSLIHVIWEEVGPDAARKFLGHT
Sbjct: 613 HSESETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHT 672
Query: 1963 QWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRT 2142
QWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVKELIRAAQEKQLE EPGRT
Sbjct: 673 QWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQEKQLEPEPGRT 732
Query: 2143 MMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQN 2322
MMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQN
Sbjct: 733 MMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQN 792
Query: 2323 VEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAV 2502
VEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAV
Sbjct: 793 VEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAV 852
Query: 2503 KTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLK 2682
KTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K
Sbjct: 853 KTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMK 912
Query: 2683 RTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIAT 2862
+++F+ +++YEIDN NWNP+YMLPE VEDLKTIRE R+VFDAEV+KLE DRFQLGTEI T
Sbjct: 913 KSEFDKVFRYEIDNENWNPSYMLPEHVEDLKTIREFRNVFDAEVKKLEGDRFQLGTEITT 972
Query: 2863 TGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSM 3042
TGDNSWP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV GDD +SM
Sbjct: 973 TGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLMSM 1032
Query: 3043 EAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVA 3222
EAQKNATLFFNILLRS ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA GEMIGCVA
Sbjct: 1033 EAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVA 1092
Query: 3223 AQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTK 3402
AQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V+KTK
Sbjct: 1093 AQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTK 1152
Query: 3403 ERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISP 3582
ERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FVKSYYEMPDEE+ P+KISP
Sbjct: 1153 ERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEVAPEKISP 1212
Query: 3583 WLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKG 3762
WLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKG
Sbjct: 1213 WLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKG 1272
Query: 3763 ELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLD 3942
EL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDENDGFK ENEWMLD
Sbjct: 1273 ELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDENDGFKPENEWMLD 1332
Query: 3943 TEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRH 4122
TEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRH
Sbjct: 1333 TEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRH 1392
Query: 4123 LAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTEN 4302
LAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD LRGVTEN
Sbjct: 1393 LAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTEN 1452
Query: 4303 IMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMM 4482
IMLGQLAPIGTG CAL LN++ML+QAIE+ LPSYME GLDFGMTP+RSP+TGTPYH+GMM
Sbjct: 1453 IMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYME-GLDFGMTPSRSPITGTPYHEGMM 1511
Query: 4483 SPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4569
SP+YLLSPN+R SP++DAQFSPYVGGMAF
Sbjct: 1512 SPSYLLSPNVRSSPISDAQFSPYVGGMAF 1540
>ref|XP_017252141.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Daucus carota
subsp. sativus]
Length = 1843
Score = 2817 bits (7302), Expect = 0.0
Identities = 1386/1524 (90%), Positives = 1463/1524 (95%), Gaps = 1/1524 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVR+VQFGILSPDEIRQMSVVHIEH ETTERGKPK GLSDPRLGTIDRKMKCETCMAN
Sbjct: 13 AKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTIDRKMKCETCMAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGF+KTVLSI+R VCFNCSKILADEED KFKQA +IRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYKFKQAQKIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RL+KILD+CK+K+KCEGGDEI+ Q QD+ EPLKKSRGGCGAQQPKI+I+GMKM+AEYK+Q
Sbjct: 133 RLKKILDSCKSKTKCEGGDEIESQSQDTDEPLKKSRGGCGAQQPKITIEGMKMIAEYKIQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
KKKNDDPEQ+PEPVERKQ LSAE+VL++LKRI+DEDC LLGLNPKYARPDWMILQVL
Sbjct: 193 KKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCMLLGLNPKYARPDWMILQVLPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTSARSEDDLTHQLAMIIRHNENL++QERNGAPAHIISEFAQLLQFHVAT
Sbjct: 253 PPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIISEFAQLLQFHVAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
QLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLK
Sbjct: 373 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINL+R SAWH + E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLMRQSAWHADGE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
G ITPGDTQVRIEKGE+++GTLCKKTLG STGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 TGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQ FSIGIGDTIADAATMEKINETIS AKN VKELIR+AQ+K LE EPGRTMMESF
Sbjct: 673 YWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDLEPEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
EN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKNEFD 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
+++YEID+ NWNP+YMLP+ VEDLKTIRE R+VFDAEVQKLEADRFQLGTEI TTGDN+
Sbjct: 913 KVFRYEIDDGNWNPSYMLPDHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEITTTGDNT 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV GDD +SMEAQKN
Sbjct: 973 WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLMSMEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRS ASKRVLKEYRLTREAF+WVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+VS +KE+AKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPNVSSSKEKAKN 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMST+I+EDV+FVKSYYEMPDEEIDPDKISPWLLR+
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDVDFVKSYYEMPDEEIDPDKISPWLLRV 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
+LNREMM+DKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGEL DE
Sbjct: 1213 QLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELQDE 1272
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K N+FDEN+GF E EWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVTEPEWMLDTEGVN 1332
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAV+CHE+VDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1392
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQ 1452
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 4497
LAPIGTGDC+L LNE+MLKQAI+I LPSYM+ GLDFGMTPARSP++GTPYHDGMMSPNY+
Sbjct: 1453 LAPIGTGDCSLYLNEKMLKQAIDIQLPSYMD-GLDFGMTPARSPISGTPYHDGMMSPNYM 1511
Query: 4498 LSPNLRLSPVTDAQFSPYVGGMAF 4569
LSPNLRLSP+TDAQFSPYVGGM F
Sbjct: 1512 LSPNLRLSPITDAQFSPYVGGMGF 1535
>ref|XP_022034547.1| DNA-directed RNA polymerase II subunit 1 [Helianthus annuus]
gb|OTG28102.1| putative RNA polymerase II large subunit [Helianthus annuus]
Length = 1824
Score = 2816 bits (7299), Expect = 0.0
Identities = 1398/1525 (91%), Positives = 1456/1525 (95%), Gaps = 2/1525 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVRVVQFGILSPDEIRQMSVVHIEH ETTERGKPK+ GLSDPRLGTIDRK+KCETC AN
Sbjct: 13 AKVRVVQFGILSPDEIRQMSVVHIEHGETTERGKPKVAGLSDPRLGTIDRKLKCETCTAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED KFKQA +IRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHKFKQAQKIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RL+KILDACK+K+KC+GGDEID Q QD EP+KKSRGGCGAQQPKI+I+GMKMVAEYKLQ
Sbjct: 133 RLKKILDACKSKTKCDGGDEIDSQNQDGDEPVKKSRGGCGAQQPKITIEGMKMVAEYKLQ 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
KKKNDD EQ+PEP ERKQ LSAE+VLS+LKRI+DEDC LLGLNPKYARPDWMILQVL
Sbjct: 193 KKKNDDTEQLPEPAERKQQLSAERVLSVLKRISDEDCMLLGLNPKYARPDWMILQVLPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTSARSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQLLQFHVAT
Sbjct: 253 PPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 313 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
QLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLK
Sbjct: 373 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSD HLE GYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDHHLEFGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRK+TKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMNILMWWEDFDGKVP P ILKPRPLWTGKQVFNLIIPKQINL+R SAWH E E
Sbjct: 553 FIEKDVFMNILMWWEDFDGKVPTPTILKPRPLWTGKQVFNLIIPKQINLIRTSAWHSETE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
G +TPGDTQVRIEKGE+++GTLCKKTLG STGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 TGHLTPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQ FSIGIGDTIADA+TME INETIS AKNEVKELIRAAQ+KQLEAEPGRTMMESF
Sbjct: 673 YWLLQQGFSIGIGDTIADASTMETINETISKAKNEVKELIRAAQDKQLEAEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKIKKKEFD 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
+YKYEID+ NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADR QLGTEIATTGDNS
Sbjct: 913 RLYKYEIDDQNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRVQLGTEIATTGDNS 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERL+VV GDD LS+EAQKN
Sbjct: 973 WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVPGDDLLSIEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRS ASKRVL EYRLTREAFEWVIGEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLSEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTK+RAKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKDRAKN 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
VQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FVKSYYEMPDEEIDPDKISPWLLRI
Sbjct: 1153 VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEIDPDKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELQDE 1272
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDEN+GFK E EWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDENEGFKPEVEWMLDTEGVN 1332
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVMCHEDVDA R+TSNHLIEVIEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEDVDALRSTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1392
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQ 1452
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSP-NY 4494
LAPIGTGDCALLLNE+ML+QAI++ LPSYM+ GLD GMTP RSP+ TPYHDGMMSP NY
Sbjct: 1453 LAPIGTGDCALLLNEQMLQQAIDVQLPSYMD-GLDIGMTPGRSPI--TPYHDGMMSPTNY 1509
Query: 4495 LLSPNLRLSPVTDAQFSPYVGGMAF 4569
LLSPNLRLSP DAQFSPYVGGM F
Sbjct: 1510 LLSPNLRLSPFNDAQFSPYVGGMGF 1534
>gb|PKI74424.1| hypothetical protein CRG98_005188 [Punica granatum]
Length = 1853
Score = 2809 bits (7281), Expect = 0.0
Identities = 1382/1524 (90%), Positives = 1463/1524 (95%), Gaps = 1/1524 (0%)
Frame = +1
Query: 1 AKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMAN 180
AKVR+VQFGILSPDEIRQMSV+ IEHSETTERGKPK GGLSDPRLGTIDRK+KCETC AN
Sbjct: 13 AKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTIDRKLKCETCTAN 72
Query: 181 MAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKN 360
MAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEE+ KFKQAMRIRNPKN
Sbjct: 73 MAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHKFKQAMRIRNPKN 132
Query: 361 RLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISIDGMKMVAEYKLQ 537
RL+KILDACKNK+KCEGGDEIDVQGQDSE P+KKSRGGCGAQQPK++I+GMKM+AEYK
Sbjct: 133 RLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPKLTIEGMKMIAEYKSP 192
Query: 538 KKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXX 717
+KK+DDP+Q+PEPVERKQ LSAE+VLS+LKRI+DEDCQLLGLNPKYARPDWMILQVL
Sbjct: 193 RKKSDDPDQLPEPVERKQTLSAERVLSVLKRISDEDCQLLGLNPKYARPDWMILQVLPIP 252
Query: 718 XXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 897
SVMMDTS+RSEDDLTHQLAMIIRHNENL++QERNGAPAHIISEFAQLLQFH+AT
Sbjct: 253 PPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRQQERNGAPAHIISEFAQLLQFHIAT 312
Query: 898 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1077
YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INID
Sbjct: 313 YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINID 372
Query: 1078 QLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1257
+LGVPWSIALNLTYPE VTPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQRLDLRYLK
Sbjct: 373 ELGVPWSIALNLTYPEAVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK 432
Query: 1258 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1437
KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 433 KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 492
Query: 1438 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDT 1617
ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDT
Sbjct: 493 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 552
Query: 1618 FIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENE 1797
FIEKDVFMN LMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINL+R SAWH E E
Sbjct: 553 FIEKDVFMNTLMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSELE 612
Query: 1798 KGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 1977
GFITPGDTQVRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 613 TGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 672
Query: 1978 YWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESF 2157
YWLLQNAFSIGIGDTIADAATME+INETIS AK+EVK LI+ AQEK+LE EPGRTMMESF
Sbjct: 673 YWLLQNAFSIGIGDTIADAATMERINETISKAKDEVKRLIKEAQEKKLEPEPGRTMMESF 732
Query: 2158 ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2337
EN+VNQVLNKARDDAGSSAQ+SLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 733 ENKVNQVLNKARDDAGSSAQRSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 792
Query: 2338 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 2517
IPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 793 IPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 852
Query: 2518 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFN 2697
GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ L+SLK+KR++F+
Sbjct: 853 GYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKRSEFD 912
Query: 2698 DMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNS 2877
+++YE+D+ NWNP+YMLPE +EDL+TIREIR+VFDAEVQKLEADR+QLGTEIATTGDNS
Sbjct: 913 RVFRYELDDDNWNPDYMLPEHIEDLRTIREIRNVFDAEVQKLEADRYQLGTEIATTGDNS 972
Query: 2878 WPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKN 3057
WPLPVN+KRL+ NAQKTFK+D RR SDMHPMEIVE VDKLQE+L VV G D LS+EAQKN
Sbjct: 973 WPLPVNLKRLIWNAQKTFKIDMRRTSDMHPMEIVEYVDKLQEKLLVVPGKDLLSVEAQKN 1032
Query: 3058 ATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIG 3237
ATLFFNILLRS ASKRVLKEYRLTREAFEW++GEIESRFL SLVA GEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLKEYRLTREAFEWILGEIESRFLLSLVAPGEMIGCVAAQSIG 1092
Query: 3238 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKN 3417
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V+KTKE AKN
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVNKTKESAKN 1152
Query: 3418 VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRI 3597
+QCALEYTTLRSVTQATEVWYDPDPM T+IEED++FVKSYYEMPDEEI P+KISPWLLRI
Sbjct: 1153 IQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRI 1212
Query: 3598 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3777
ELNREMMVDKKLSMADIAEKINLEFDDDL CIFNDDNA+KLILRIRIMND+APKGE+NDE
Sbjct: 1213 ELNREMMVDKKLSMADIAEKINLEFDDDLNCIFNDDNADKLILRIRIMNDDAPKGEMNDE 1272
Query: 3778 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVN 3957
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN K+NKF+E+DGFK E EWMLDTEGVN
Sbjct: 1273 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNGKVNKFEESDGFKPETEWMLDTEGVN 1332
Query: 3958 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILC 4137
LLAVMCHE VDARRTTSNHLIE+IEVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1333 LLAVMCHEGVDARRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1392
Query: 4138 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQ 4317
DTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AE+D LRGVTENIMLGQ
Sbjct: 1393 DTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQ 1452
Query: 4318 LAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYL 4497
LAPIGTGDCAL LN+EMLK AIE+ LPSYME GLDFGMTPARSP++GTPYH+GMMSP+YL
Sbjct: 1453 LAPIGTGDCALYLNDEMLKHAIELQLPSYME-GLDFGMTPARSPISGTPYHEGMMSPSYL 1511
Query: 4498 LSPNLRLSPVTDAQFSPYVGGMAF 4569
LSPNLRLSP+TDAQFSPYVGGMAF
Sbjct: 1512 LSPNLRLSPITDAQFSPYVGGMAF 1535