BLASTX nr result

ID: Rehmannia31_contig00001991 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00001991
         (412 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081198.1| elongation factor G-1, chloroplastic [Sesamu...    63   2e-12
gb|PIN25383.1| Mitochondrial elongation factor [Handroanthus imp...    60   2e-11
ref|XP_012850036.1| PREDICTED: elongation factor G, chloroplasti...    47   1e-06

>ref|XP_011081198.1| elongation factor G-1, chloroplastic [Sesamum indicum]
          Length = 785

 Score = 63.2 bits (152), Expect(2) = 2e-12
 Identities = 33/41 (80%), Positives = 35/41 (85%)
 Frame = -3

Query: 128 AXSSSFLGSVGLNSIATRLSALQQKQLRRNFSVFAMAAEEK 6
           A SSSFLGSVGL S  T+LSALQQKQ RRNFSVFAMAA E+
Sbjct: 51  ALSSSFLGSVGLTSTVTKLSALQQKQQRRNFSVFAMAAAER 91



 Score = 36.6 bits (83), Expect(2) = 2e-12
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -1

Query: 172 NASSTLCNLNGSSRRP 125
           NASSTLCNLNGSSRRP
Sbjct: 15  NASSTLCNLNGSSRRP 30


>gb|PIN25383.1| Mitochondrial elongation factor [Handroanthus impetiginosus]
          Length = 785

 Score = 59.7 bits (143), Expect(2) = 2e-11
 Identities = 31/42 (73%), Positives = 33/42 (78%)
 Frame = -3

Query: 128 AXSSSFLGSVGLNSIATRLSALQQKQLRRNFSVFAMAAEEKR 3
           A SSSFLG VGL S  T+ S L QKQ RRNFSVFAMAA+EKR
Sbjct: 51  ALSSSFLGGVGLRSTVTKPSTLHQKQQRRNFSVFAMAADEKR 92



 Score = 36.6 bits (83), Expect(2) = 2e-11
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -1

Query: 172 NASSTLCNLNGSSRRP 125
           NASSTLCNLNGSSRRP
Sbjct: 15  NASSTLCNLNGSSRRP 30


>ref|XP_012850036.1| PREDICTED: elongation factor G, chloroplastic [Erythranthe guttata]
 gb|EYU26824.1| hypothetical protein MIMGU_mgv1a001613mg [Erythranthe guttata]
          Length = 785

 Score = 46.6 bits (109), Expect(2) = 1e-06
 Identities = 30/45 (66%), Positives = 33/45 (73%), Gaps = 3/45 (6%)
 Frame = -3

Query: 128 AXSSSFLGSVGLNSIATRLSALQQKQLRRNFSVFAMAA---EEKR 3
           A SSSFLG+V L+S A +LS LQQ   RRN SVFAMAA   EEKR
Sbjct: 50  ALSSSFLGTVRLSSAAAKLSTLQQ---RRNLSVFAMAAAPVEEKR 91



 Score = 33.5 bits (75), Expect(2) = 1e-06
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -1

Query: 172 NASSTLCNLNGSSRRP 125
           N+SS LCNLNGSSRRP
Sbjct: 14  NSSSALCNLNGSSRRP 29


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