BLASTX nr result
ID: Rehmannia31_contig00001844
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00001844
(518 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178... 215 5e-62
ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424... 214 5e-61
ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177... 206 2e-58
ref|XP_015383571.1| PREDICTED: uncharacterized protein LOC107176... 190 2e-56
gb|PNY01489.1| copia-like polyprotein, partial [Trifolium pratense] 195 2e-54
dbj|GAU19483.1| hypothetical protein TSUD_77270 [Trifolium subte... 195 2e-54
dbj|GAU21262.1| hypothetical protein TSUD_286720 [Trifolium subt... 192 3e-54
emb|CAN74951.1| hypothetical protein VITISV_030567, partial [Vit... 194 4e-54
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo... 192 1e-53
dbj|GAU51268.1| hypothetical protein TSUD_412550 [Trifolium subt... 192 2e-53
gb|PNY02796.1| copia protein (gag-int-pol protein), partial [Tri... 191 4e-53
gb|PNX76291.1| gag/pol polyprotein - maize retrotransposon Hopsc... 190 5e-53
gb|KYP31892.1| Retrovirus-related Pol polyprotein from transposo... 178 5e-53
gb|KYP41416.1| Retrovirus-related Pol polyprotein from transposo... 176 9e-53
gb|PNX94503.1| putative retrotransposon Ty1-copia subclass prote... 189 2e-52
gb|PNX94499.1| retrovirus-related Pol polyprotein from transposo... 189 2e-52
gb|KYP45977.1| Retrovirus-related Pol polyprotein from transposo... 173 7e-52
gb|PNX78574.1| retrovirus-related Pol polyprotein from transposo... 185 8e-52
gb|PNX93094.1| histone deacetylase, partial [Trifolium pratense] 184 9e-51
gb|PNX93770.1| histone deacetylase [Trifolium pratense] 184 1e-50
>ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178344 [Citrus sinensis]
Length = 877
Score = 215 bits (547), Expect = 5e-62
Identities = 91/151 (60%), Positives = 114/151 (75%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
AC+LGK H HF S T + P +L+H+DLWGP+ ++S++GY YY+ LDDYTRYTWIFP
Sbjct: 494 ACQLGKCHMQHFPSIETSITQPLELLHADLWGPAPITSSQGYSYYLSILDDYTRYTWIFP 553
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
L KS+ + F+ F + +E +IKCLQTDWGGE+RP V L+ GIQFRHPCP++H
Sbjct: 554 LTTKSKTLSAFIDFKNMIENCLNLRIKCLQTDWGGEFRPFVSYLSEQGIQFRHPCPYIHH 613
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QN K ERKH HIVE GL+LLAQAH+PLKFWW
Sbjct: 614 QNRKIERKHRHIVETGLTLLAQAHLPLKFWW 644
>ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424043 [Ziziphus jujuba]
Length = 1270
Score = 214 bits (544), Expect = 5e-61
Identities = 92/151 (60%), Positives = 118/151 (78%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
AC+LGK H HF +K S+P +LVH+D+WGP++ S EGY+YYIHF+DDY+R+TWI+P
Sbjct: 669 ACQLGKNHLCHFSLSNSKASAPLELVHTDVWGPAATVSKEGYRYYIHFIDDYSRFTWIYP 728
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
+ KSEA F F+ VER F +K+K +Q+DWGGEYR +P L +GI+FRH CP+MHQ
Sbjct: 729 MTVKSEALFIFKHFHVMVERLFDTKLKVVQSDWGGEYRCFLPYLQQVGIKFRHSCPYMHQ 788
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QNG+AERKH HIVE+GLS LAQAHMPL +WW
Sbjct: 789 QNGRAERKHRHIVEVGLSFLAQAHMPLLYWW 819
>ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177515 [Citrus sinensis]
Length = 1143
Score = 206 bits (525), Expect = 2e-58
Identities = 90/151 (59%), Positives = 111/151 (73%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
ACK+GK+H +HF TKT P +++H+DLWGPS V S +GY+YY+ F+DD TR+TWIFP
Sbjct: 574 ACKMGKMHRLHFSVTETKTKFPLEILHTDLWGPSPVISPQGYRYYVSFVDDCTRFTWIFP 633
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
LK K E F F + +E+QF IKCLQ+DWGGE+R V L + GIQFRH CP+ H
Sbjct: 634 LKTKDETLPVFKIFKTQIEKQFSRPIKCLQSDWGGEFRSFVNYLLAEGIQFRHLCPYTHN 693
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QNG ERKH HI E+GL+LLAQA MPLKFWW
Sbjct: 694 QNGLVERKHRHITELGLTLLAQAAMPLKFWW 724
>ref|XP_015383571.1| PREDICTED: uncharacterized protein LOC107176065 [Citrus sinensis]
Length = 356
Score = 190 bits (482), Expect = 2e-56
Identities = 85/151 (56%), Positives = 107/151 (70%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
AC+LGK+H F + TKT +L+H+DLWGPS S GYKYYI F+DD TRYTWI+P
Sbjct: 200 ACQLGKVHRQSFPASETKTKGVLELIHTDLWGPSPTVSRNGYKYYISFVDDCTRYTWIYP 259
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
LK KS+A+ F F + VE QF +KIK LQ+D GGE+R L GI+FRH CP+ H
Sbjct: 260 LKLKSQAFEVFKLFKAQVENQFNTKIKELQSDLGGEFRVFSDFLNQNGIKFRHSCPYTHH 319
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QNG ERKH HI+E+ L+LLAQA++P +FWW
Sbjct: 320 QNGLVERKHRHIIELALTLLAQANLPFQFWW 350
>gb|PNY01489.1| copia-like polyprotein, partial [Trifolium pratense]
Length = 1000
Score = 195 bits (495), Expect = 2e-54
Identities = 82/151 (54%), Positives = 111/151 (73%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
AC+ GKLH + F+S + P L+HSD+WGP+ + S G+KYY+HF+DD++R+TWIFP
Sbjct: 476 ACQFGKLHLLPFKSSSSHVQEPLGLIHSDVWGPAPILSPSGFKYYVHFIDDFSRFTWIFP 535
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
LKQKS+ + F+QF + E QF KIK +Q D GGEY+ + + GIQFR CP+ Q
Sbjct: 536 LKQKSDTIHAFIQFKNLAENQFNKKIKIIQCDGGGEYKAVQKVSIEAGIQFRMSCPYTSQ 595
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QNG+AERKH H+VE+GL+LLAQA MPL++WW
Sbjct: 596 QNGRAERKHRHVVELGLTLLAQAKMPLRYWW 626
>dbj|GAU19483.1| hypothetical protein TSUD_77270 [Trifolium subterraneum]
Length = 1353
Score = 195 bits (495), Expect = 2e-54
Identities = 81/151 (53%), Positives = 110/151 (72%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
AC+ GK+H + F+S + P +LVH+D+WGP+ + ++ G+KYY+HF+DD++R+TWI+P
Sbjct: 470 ACQYGKMHLLPFKSSSSHAQEPLELVHTDVWGPAPIMTSSGFKYYVHFVDDFSRFTWIYP 529
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
LKQKSE F+QF + E QF +IK +Q D GGEY+P+ L GIQFR CP+ Q
Sbjct: 530 LKQKSETVQAFIQFKNLTENQFNKRIKVIQCDGGGEYKPVQKLAVEAGIQFRMSCPYTSQ 589
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QNG+AERKH HI E GL+LLAQA MPL +WW
Sbjct: 590 QNGRAERKHRHITEFGLTLLAQAQMPLHYWW 620
>dbj|GAU21262.1| hypothetical protein TSUD_286720 [Trifolium subterraneum]
Length = 743
Score = 192 bits (488), Expect = 3e-54
Identities = 81/151 (53%), Positives = 108/151 (71%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
AC+ GKLH + F S + P L+HSD+WGP+ + S+ KYY+HF+DD++R+TWIFP
Sbjct: 299 ACQFGKLHLLPFNSSSSHAKEPLDLIHSDVWGPAPILSSSNIKYYVHFIDDFSRFTWIFP 358
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
LKQKSE + F QF + VE QF KI+ +Q D GGEY+P+ + GIQFR CP+ Q
Sbjct: 359 LKQKSETIHAFTQFKNMVENQFNKKIRVIQCDGGGEYKPVQKVAIESGIQFRMSCPYTSQ 418
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QNG+AERKH H+ E+G++LLAQA MPL +WW
Sbjct: 419 QNGRAERKHRHVTELGITLLAQAKMPLHYWW 449
>emb|CAN74951.1| hypothetical protein VITISV_030567, partial [Vitis vinifera]
Length = 2203
Score = 194 bits (493), Expect = 4e-54
Identities = 86/151 (56%), Positives = 110/151 (72%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
AC LGK + KT PF+LV SD+W P+ +S +GYKYYI F+D +T YTWI+P
Sbjct: 480 ACPLGKAKQFPLPTTINKTQVPFELVFSDVWEPAHTTSCDGYKYYIAFVDAFTNYTWIYP 539
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
+QKS+A + LQF + V+R+F +K+KCLQTDWGGE+ PL LL GI FRHPCPH+HQ
Sbjct: 540 RQQKSQATSIVLQFIALVDRKFPTKLKCLQTDWGGEFHPLQSLLQKKGILFRHPCPHVHQ 599
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QNGK ERKH IVE+GL+LLA++ +P FWW
Sbjct: 600 QNGKVERKHRSIVEIGLTLLAKSQLPFTFWW 630
Score = 96.7 bits (239), Expect = 5e-20
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQP-TKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIF 178
AC++GK F+++ TS P +L+H DL+GPS S G Y +DD++RYTW+
Sbjct: 1072 ACQMGKQIKNSFKNKNFISTSRPLELLHMDLFGPSRTPSLGGKSYAYVIVDDFSRYTWVL 1131
Query: 179 PLKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYR--PLVPLLASLGIQFRHPCPH 352
L QKSEA+ F +F + V+ + I C+++D G E+ GI P
Sbjct: 1132 FLSQKSEAFYEFSKFCNKVQNEKGFSITCIRSDHGREFENFDFEEYCNKHGINHNFSAPR 1191
Query: 353 MHQQNGKAERKHLHIVEMGLSLLAQAHMPLKFW 451
QQNG ERK+ + EM ++L + ++P FW
Sbjct: 1192 TPQQNGVVERKNRTLQEMARTMLNENNLPKYFW 1224
>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1165
Score = 192 bits (489), Expect = 1e-53
Identities = 83/151 (54%), Positives = 109/151 (72%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
AC+ GK HN+ FQ+ + P LVHSD+WGP+ +SS G+KYY+ FLDD++R+TWI+P
Sbjct: 401 ACQFGKAHNLPFQNSVSCAKEPLDLVHSDVWGPAPISSVSGFKYYVLFLDDWSRFTWIYP 460
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
LKQKS+ + F+QF + VE QF +IK LQ D GGE++ L +L GIQ R CP+
Sbjct: 461 LKQKSDVFQAFIQFRNLVENQFNKRIKTLQCDGGGEFKSLSKVLIKTGIQLRESCPYTSA 520
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QNG+AERKH H+VE GL+LLAQA MPL +WW
Sbjct: 521 QNGRAERKHRHVVESGLTLLAQAKMPLHYWW 551
>dbj|GAU51268.1| hypothetical protein TSUD_412550 [Trifolium subterraneum]
Length = 1387
Score = 192 bits (487), Expect = 2e-53
Identities = 80/151 (52%), Positives = 109/151 (72%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
AC+ GKLH + F+ + P L+HSD+WGP+ + S G+KYY+HF+DD++R+TWIFP
Sbjct: 470 ACQFGKLHLLPFKPSSSHVQEPLALIHSDVWGPAPILSPSGFKYYVHFIDDFSRFTWIFP 529
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
LKQKS+ + F+QF + E QF KIK +Q D GGEY+ + + GIQFR CP+ Q
Sbjct: 530 LKQKSDTIHAFIQFKNLAENQFNKKIKIIQCDGGGEYKAVQKVSIEAGIQFRMSCPYTSQ 589
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QNG+AERKH H+ E+GL+LLAQA MPL++WW
Sbjct: 590 QNGRAERKHRHVAELGLTLLAQAKMPLRYWW 620
>gb|PNY02796.1| copia protein (gag-int-pol protein), partial [Trifolium pratense]
Length = 1009
Score = 191 bits (485), Expect = 4e-53
Identities = 80/151 (52%), Positives = 109/151 (72%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
AC+ GKLH + F+S + P L+H+D+WGP+ + S G+KYY+HF+DD++R+TWI+P
Sbjct: 201 ACQFGKLHLLPFKSSYSHAQEPLDLIHTDVWGPAPIMSNSGFKYYVHFIDDFSRFTWIYP 260
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
LKQKSE + F QF + VE QF +IK +Q D GGEY+ + L GIQFR CP+ Q
Sbjct: 261 LKQKSETIHAFTQFKTLVENQFNKRIKIVQCDGGGEYKAVQKLALEAGIQFRMSCPYTSQ 320
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QNG+AERKH H+ E+GL++LAQA MPL +WW
Sbjct: 321 QNGRAERKHRHVAELGLTMLAQARMPLCYWW 351
>gb|PNX76291.1| gag/pol polyprotein - maize retrotransposon Hopscotch, partial
[Trifolium pratense]
Length = 835
Score = 190 bits (482), Expect = 5e-53
Identities = 81/151 (53%), Positives = 110/151 (72%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
AC+ GK+H + F++ + +LVH+D+WGP+ + S+ G+KYY+HF+DD+TR+TWI+P
Sbjct: 477 ACQYGKMHFLPFKTSFSHAKEILELVHTDVWGPAPIISSSGFKYYVHFIDDFTRFTWIYP 536
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
LKQKS+ + F+QF + VE QF KIK +Q D GGEY+P+ GIQFR CP+ Q
Sbjct: 537 LKQKSDTAHAFIQFKNMVENQFSKKIKTIQCDGGGEYKPVQKHAIEAGIQFRMSCPYTSQ 596
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QNG+AERKH HI E GL+LLAQA MPL +WW
Sbjct: 597 QNGRAERKHRHIAEFGLTLLAQAKMPLNYWW 627
>gb|KYP31892.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 264
Score = 178 bits (452), Expect = 5e-53
Identities = 77/151 (50%), Positives = 104/151 (68%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
AC+ GK+H + F++ + F+LVH+D+WGP+ V+S G+KYY+HFLDD++R+TWI+P
Sbjct: 66 ACQYGKMHFLPFKTSSSHAKEIFELVHTDVWGPAPVTSPSGFKYYVHFLDDFSRFTWIYP 125
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
LK KS+ F QF + E F +IK +Q D GGEY+ + GIQFR CP+ Q
Sbjct: 126 LKHKSDTAQAFTQFKNMAENLFNKRIKTIQCDGGGEYKTVQNHAIEAGIQFRMSCPYTSQ 185
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QNG+AERKH HI E L+LLAQA MPL +WW
Sbjct: 186 QNGRAERKHRHITEFSLTLLAQAKMPLHYWW 216
>gb|KYP41416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 201
Score = 176 bits (445), Expect = 9e-53
Identities = 77/151 (50%), Positives = 106/151 (70%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
AC+ GK H + F+S ++ P L+H+D+WGP+ +SS+ G++YY+HFL+D+ ++TW FP
Sbjct: 35 ACQFGKSHLLPFKSSISRAKKPLDLIHTDVWGPAPISSSSGFRYYVHFLNDFNKFTWTFP 94
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
LKQKS+ F+QF S V+ QF KIK LQ D GGEY+ L L+ GIQ C +
Sbjct: 95 LKQKSD----FMQFKSMVKNQFNRKIKFLQCDGGGEYKALEKLIQECGIQLGMSCQYTSA 150
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QNG+ ERKH H+VE+GL+LL+QA MPL FWW
Sbjct: 151 QNGQVERKHRHVVELGLTLLSQAKMPLHFWW 181
>gb|PNX94503.1| putative retrotransposon Ty1-copia subclass protein, partial
[Trifolium pratense]
Length = 1242
Score = 189 bits (481), Expect = 2e-52
Identities = 80/151 (52%), Positives = 108/151 (71%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
AC+ GKLH + F++ + P L+H+D+WGP+ + S +KYY+HFLDD++R+TWIFP
Sbjct: 477 ACQFGKLHLLPFKTSSSHAKEPLDLIHTDVWGPAPILSQSNFKYYVHFLDDFSRFTWIFP 536
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
LKQKSE + F QF + VE QF KIK ++ D GGEY+P+ GIQF+ CP+ Q
Sbjct: 537 LKQKSETIHAFNQFKNLVENQFNKKIKVIRCDGGGEYKPVQKCAIDSGIQFQMSCPYTSQ 596
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QNG+AERKH H+ E+GL+LLAQA MPL +WW
Sbjct: 597 QNGRAERKHRHVTELGLTLLAQAKMPLSYWW 627
>gb|PNX94499.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Trifolium pratense]
Length = 1434
Score = 189 bits (481), Expect = 2e-52
Identities = 85/149 (57%), Positives = 108/149 (72%)
Frame = +2
Query: 5 CKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFPL 184
C +GK H ++ T + PF+++H DLWGP+ ++S GY YYI F+D YT+YTWI+ L
Sbjct: 618 CCIGKSHRLYAPLSNTIYTQPFEVIHCDLWGPAPIASDYGYNYYITFVDTYTKYTWIYFL 677
Query: 185 KQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQQ 364
KQKS+A F QF +FV+ QFQ+ IK LQ+DWGGE+RP LL +LGIQ R CPH Q
Sbjct: 678 KQKSDALKAFTQFLTFVKNQFQASIKALQSDWGGEFRPFTSLLNTLGIQHRLTCPHTSHQ 737
Query: 365 NGKAERKHLHIVEMGLSLLAQAHMPLKFW 451
NG ERKH IVEMGL+LL+QAH+PLKFW
Sbjct: 738 NGTVERKHRQIVEMGLTLLSQAHLPLKFW 766
>gb|KYP45977.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 197
Score = 173 bits (439), Expect = 7e-52
Identities = 79/153 (51%), Positives = 107/153 (69%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
+C L K H +H + ++PF+++ SDLWG + VSST G++YYI F+D Y R+TWI+
Sbjct: 39 SCCLRKSHRLHSGPSTSVYTAPFEVIFSDLWGLAFVSSTCGFQYYIIFVDAYMRFTWIYL 98
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
LK K++ F QF++ V+ QFQ IK LQTDWGGEYRP L +GIQ R CPH H
Sbjct: 99 LKNKAQTIGVFKQFHNMVKNQFQLPIKALQTDWGGEYRPFTAYLNDVGIQHRLICPHTHH 158
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWWIP 460
QNG E KH HIVE+GL++LAQA++P++FW +P
Sbjct: 159 QNGVVECKHRHIVELGLTMLAQANLPMQFWIMP 191
>gb|PNX78574.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 677
Score = 185 bits (469), Expect = 8e-52
Identities = 76/151 (50%), Positives = 111/151 (73%)
Frame = +2
Query: 2 ACKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFP 181
AC+LGK H + F+S + +L+H+D+WGP+ ++S G+KYY+HF+DD +R+TWI+P
Sbjct: 478 ACQLGKSHLLPFKSSSSHAQEVLELIHTDVWGPAPINSISGFKYYVHFIDDSSRFTWIYP 537
Query: 182 LKQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQ 361
LKQKS+ + F+QF + VE QF +IK +Q D GGE++P+ + GI+FR CP+ Q
Sbjct: 538 LKQKSDTIHAFMQFKNMVENQFNKRIKIIQCDGGGEFKPVQKVALETGIKFRMSCPYTSQ 597
Query: 362 QNGKAERKHLHIVEMGLSLLAQAHMPLKFWW 454
QNG+AERKH H+ E+GL+LLAQA+M L +WW
Sbjct: 598 QNGRAERKHRHVAELGLTLLAQANMSLHYWW 628
>gb|PNX93094.1| histone deacetylase, partial [Trifolium pratense]
Length = 1513
Score = 184 bits (468), Expect = 9e-51
Identities = 82/149 (55%), Positives = 106/149 (71%)
Frame = +2
Query: 5 CKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFPL 184
C +GK H ++ T ++PF+++H DLWGP+ S GY YYI F+D YT+YTWI+ L
Sbjct: 649 CCIGKSHRLYAPLSKTNYTTPFEVIHCDLWGPAPFESYYGYNYYITFVDTYTKYTWIYFL 708
Query: 185 KQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQQ 364
KQKS+A F QF +FV+ QFQ+ +K LQ+DWGGE+RP LL SLGIQ R CPH Q
Sbjct: 709 KQKSDALKAFTQFLTFVQNQFQASVKALQSDWGGEFRPFTTLLNSLGIQHRLTCPHTSHQ 768
Query: 365 NGKAERKHLHIVEMGLSLLAQAHMPLKFW 451
NG ERKH IVEMGL++L+Q+ +PLKFW
Sbjct: 769 NGTVERKHRQIVEMGLTMLSQSSIPLKFW 797
>gb|PNX93770.1| histone deacetylase [Trifolium pratense]
Length = 1453
Score = 184 bits (467), Expect = 1e-50
Identities = 81/149 (54%), Positives = 107/149 (71%)
Frame = +2
Query: 5 CKLGKLHNMHFQSQPTKTSSPFQLVHSDLWGPSSVSSTEGYKYYIHFLDDYTRYTWIFPL 184
C +GK H ++ T + PF++VH DLWGP+ +S+ GY YYI F+D YT+YTWI+ L
Sbjct: 578 CCIGKSHRLYSPLSDTVYTKPFEVVHCDLWGPAPFTSSYGYNYYISFVDTYTKYTWIYFL 637
Query: 185 KQKSEAYNTFLQFNSFVERQFQSKIKCLQTDWGGEYRPLVPLLASLGIQFRHPCPHMHQQ 364
K KS+A F QF+S+++ QFQ+ IK LQ+DWGGE+RP LL +LGIQ R CPH Q
Sbjct: 638 KHKSDALKAFTQFSSYIQNQFQTSIKALQSDWGGEFRPFTALLNTLGIQHRLTCPHTSHQ 697
Query: 365 NGKAERKHLHIVEMGLSLLAQAHMPLKFW 451
NG ERKH IVEMGL+LL+QA +PL++W
Sbjct: 698 NGTVERKHRQIVEMGLTLLSQASLPLRYW 726