BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00001364
         (3499 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica ...  2169   0.0  
dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica ...  2013   0.0  
gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica m...  1999   0.0  
gb|AAX19931.1| viral replicase [Nandina mosaic virus]                1993   0.0  
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1981   0.0  
gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus]                 1980   0.0  
emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1980   0.0  
gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica m...  1979   0.0  
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1977   0.0  
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1977   0.0  
gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica m...  1977   0.0  
gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica m...  1977   0.0  
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1976   0.0  
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1976   0.0  
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1975   0.0  
gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica m...  1974   0.0  
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1971   0.0  
gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]                 1971   0.0  
gb|AVL84357.1| RNA-dependent RNA polymerase [Plantago asiatica m...  1950   0.0  
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] >gi|...  1916   0.0  

>dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1387

 Score = 2169 bits (5619), Expect = 0.0
 Identities = 1061/1166 (90%), Positives = 1108/1166 (95%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYS+DGFMYIPGGHAGASYFHKYDQLEWLTVGHLTA NQPTITAQRLETKGANHLFIFQ
Sbjct: 196  LTYSDDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTANNQPTITAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNL+QRLLRPLRSDIQ
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLLQRLLRPLRSDIQ 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            ++LQFFRGRPSFV+LIKALDWQP+TLEFPVR+VNT+LRGPPGF NPFTKPHPVNP+D DT
Sbjct: 376  KILQFFRGRPSFVRLIKALDWQPVTLEFPVRSVNTKLRGPPGFRNPFTKPHPVNPDDDDT 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
            MR+FREF++T + S+P T+ADSLEGSAEN   HTSLKVGH+DLSTEQLRALHELG++RLG
Sbjct: 436  MRSFREFTHTLDNSSPATVADSLEGSAENPTIHTSLKVGHSDLSTEQLRALHELGNSRLG 495

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGDHADQAPVNSDPATLPWVAWLPKL 2420
            GPLLP+I  +EQ  E          PT  +TT  Q +H DQAPVNS+P+TLPWV+WLPKL
Sbjct: 496  GPLLPKITLNEQSREPCPDLPPEPRPTTTSTTQAQENHPDQAPVNSEPSTLPWVSWLPKL 555

Query: 2419 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTPW 2240
            NALGFEALEIQ DPSTG+ IMPI DVR L KATLPEHW EP LSK+LTTLRSLNR PTPW
Sbjct: 556  NALGFEALEIQIDPSTGDTIMPITDVRSLQKATLPEHWIEPSLSKILTTLRSLNRSPTPW 615

Query: 2239 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 2060
            CPDRARARAFTSDVKNSRTGKALHRETQTWKETQ MLT+NVT NLAISVIHGAGGSGKSQ
Sbjct: 616  CPDRARARAFTSDVKNSRTGKALHRETQTWKETQAMLTDNVTTNLAISVIHGAGGSGKSQ 675

Query: 2059 ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1880
            ALQ++LRQNPDLP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVV+FDDYG
Sbjct: 676  ALQSMLRQNPDLPMEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVVFDDYG 735

Query: 1879 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYINA 1700
            KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFT+LSRYYINA
Sbjct: 736  KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTKLSRYYINA 795

Query: 1699 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 1520
            THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 796  THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLIKKAAFTDAGHKVSTYAGC 855

Query: 1519 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 1340
            QGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF
Sbjct: 856  QGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 915

Query: 1339 LSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGH 1160
            LSLVREDKIEEF+A               PVEDK+TTLDDFKE L+DKF+REIFTEAHGH
Sbjct: 916  LSLVREDKIEEFAAPKDAPKPIAPPVTHFPVEDKSTTLDDFKEGLNDKFDREIFTEAHGH 975

Query: 1159 TNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYH 980
            TNCVQG+DPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILW NYH
Sbjct: 976  TNCVQGNDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWTNYH 1035

Query: 979  KAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQW 800
            KAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSI+QIKGGERRQSPDFHEHQILIFLKSQW
Sbjct: 1036 KAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQW 1095

Query: 799  VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 620
            VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS
Sbjct: 1096 VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 1155

Query: 619  RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 440
            RWVL++WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF
Sbjct: 1156 RWVLSHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 1215

Query: 439  LGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFTL 260
            LGTLSIMRLTGEGPTFDANTECNIAYTHTRF IPEGTAQIYAGDDCAIAQVCPEKPSF L
Sbjct: 1216 LGTLSIMRLTGEGPTFDANTECNIAYTHTRFNIPEGTAQIYAGDDCAIAQVCPEKPSFAL 1275

Query: 259  LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 80
            LKNRIALQAKPAY+PQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI
Sbjct: 1276 LKNRIALQAKPAYSPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 1335

Query: 79   SNVIANYSLDAKLAYSLGDDLQELLS 2
            SNV+ANYSLDA+LAYSLGDDLQ+LLS
Sbjct: 1336 SNVVANYSLDARLAYSLGDDLQDLLS 1361


>dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1387

 Score = 2013 bits (5216), Expect = 0.0
 Identities = 984/1166 (84%), Positives = 1048/1166 (89%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFH+YDQLEWLTVGHL+A  QPT+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHRYDQLEWLTVGHLSAQGQPTVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNY+TP +RTFTT + YVTVPDIFLPE+YNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYMTPPKRTFTTADQYVTVPDIFLPERYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNL+QRLLRP+R+D+Q
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLLQRLLRPIRADMQ 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            R++QFF+G+PSFVKLIKALDWQPITLEFPVR+V T +RGPPGF +PFTKPHPVN +D  T
Sbjct: 376  RIVQFFKGQPSFVKLIKALDWQPITLEFPVRSVKTHVRGPPGFQSPFTKPHPVNTDDGQT 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
             + F++F+     +T  T+A +LE + E  A HT LK+    L+  QL ALH LG+TR G
Sbjct: 436  SKDFQDFTLRGAGTTHHTVAAALEATTECEAGHTCLKIATEHLTEPQLLALHNLGNTRCG 495

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGDHADQAPVNSDPATLPWVAWLPKL 2420
            GPLLP      Q  E            +  T     +   + P N +P  LPWVAWLPKL
Sbjct: 496  GPLLPPATTSAQVEEPCPDLPPAPRAAEGQTQTPPQEEQGEQPRNVEPNELPWVAWLPKL 555

Query: 2419 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTPW 2240
            NALGFEA EIQTDPSTG +IMPI D  DLP+ATLP HW++P L K+LTTLRSLNRFPTPW
Sbjct: 556  NALGFEAREIQTDPSTGAMIMPITDTLDLPRATLPAHWEDPELQKILTTLRSLNRFPTPW 615

Query: 2239 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 2060
             PDRARARAFTSDVKNSRTGKALHRE+  WKETQT+LT+    +LAISVIHGAGGSGKSQ
Sbjct: 616  TPDRARARAFTSDVKNSRTGKALHRESLVWKETQTLLTDTADVDLAISVIHGAGGSGKSQ 675

Query: 2059 ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1880
            ALQTLLRQ+P LPIEVVLPTNELRLDWL+KLPHNPPEQFRTFERAFVCS+SPVVIFDDYG
Sbjct: 676  ALQTLLRQDPTLPIEVVLPTNELRLDWLRKLPHNPPEQFRTFERAFVCSRSPVVIFDDYG 735

Query: 1879 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYINA 1700
            KLPQGY+EAFAMTHA+LELVILTGDPRQSTHHEANEEALISKL PAT +F +LSRYYINA
Sbjct: 736  KLPQGYLEAFAMTHANLELVILTGDPRQSTHHEANEEALISKLTPATAVFAQLSRYYINA 795

Query: 1699 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 1520
            THRNSKFLANKLGVYSSN CPLKVTYGFQPQPG+HLLVPSLMKKAAFTDAGHKVSTYAGC
Sbjct: 796  THRNSKFLANKLGVYSSNPCPLKVTYGFQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAGC 855

Query: 1519 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 1340
            QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF
Sbjct: 856  QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 915

Query: 1339 LSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGH 1160
            LSLVREDKI EFSA               PVE ++TTLDDFKE L DKF+REIF EAHGH
Sbjct: 916  LSLVREDKIMEFSASDDSPAPVAPPTTHFPVEGRSTTLDDFKEELDDKFDREIFNEAHGH 975

Query: 1159 TNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYH 980
            TNCVQ DD T QLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILW NYH
Sbjct: 976  TNCVQTDDTTIQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWVNYH 1035

Query: 979  KAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQW 800
            KAM LPKEQP+FSEDLW RCAEEVQNTYLKKSI+QIKGGERRQSPDFH H+ILIFLKSQW
Sbjct: 1036 KAMGLPKEQPDFSEDLWVRCAEEVQNTYLKKSINQIKGGERRQSPDFHTHEILIFLKSQW 1095

Query: 799  VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 620
            VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQD+S
Sbjct: 1096 VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDIS 1155

Query: 619  RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 440
            RWV+NYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF
Sbjct: 1156 RWVMNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 1215

Query: 439  LGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFTL 260
            LGTLSIMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSFTL
Sbjct: 1216 LGTLSIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFTL 1275

Query: 259  LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 80
            LKNR+ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI
Sbjct: 1276 LKNRLALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 1335

Query: 79   SNVIANYSLDAKLAYSLGDDLQELLS 2
            +NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1336 TNVVANYSLDAKLAYSLGDDLQDLLS 1361


>gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1387

 Score = 1999 bits (5179), Expect = 0.0
 Identities = 984/1166 (84%), Positives = 1037/1166 (88%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFH+YDQLEWLTVGHLTA  QPTITAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHRYDQLEWLTVGHLTAPGQPTITAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTP RRTF T++HYVTVP IFLPE YNCRTPISKT MMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPARRTFATSDHYVTVPQIFLPEDYNCRTPISKTTMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCF+DVLSGNL+QRLLRPLR+D Q
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFQDVLSGNLLQRLLRPLRADFQ 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            RVLQFF+GRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF NPFT+P PVNPEDADT
Sbjct: 376  RVLQFFQGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKNPFTQPQPVNPEDADT 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
             R F++F+         T+  +LE +AE+   HT LKV    L  +QL A+H LG  R G
Sbjct: 436  SRGFQDFTRATTPKLQPTVEATLEATAESSDHHTQLKVLCDTLPEKQLEAIHALGHLRCG 495

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGDHADQAPVNSDPATLPWVAWLPKL 2420
            GPLLP        +E           + A+      +  D  P    P TLPWVAWLPKL
Sbjct: 496  GPLLPAPTQSCSPAEPCPDLPPSPVKSTASPASPDPNVLDAQPTTQAPETLPWVAWLPKL 555

Query: 2419 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTPW 2240
            NALGFEALE+Q DPSTGE+IMPI D RDLP+ATLP HW+   L  +LTTLRSLNRFPTPW
Sbjct: 556  NALGFEALEVQHDPSTGEMIMPITDTRDLPRATLPPHWQGHDLESILTTLRSLNRFPTPW 615

Query: 2239 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 2060
             PDR RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTEN  A+LAISVIHGAGGSGKSQ
Sbjct: 616  SPDRTRARAFTSDVKNSRTGKALHRESQAWKETQTMLTENTQADLAISVIHGAGGSGKSQ 675

Query: 2059 ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1880
            ALQTLLRQNP LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFV S SPVVIFDDYG
Sbjct: 676  ALQTLLRQNPSLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVSSHSPVVIFDDYG 735

Query: 1879 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYINA 1700
            KLPQGY+EAFA+THA+LEL ILTGDPRQSTHHE+NEEALISKL PATTI++ LSRYYINA
Sbjct: 736  KLPQGYLEAFALTHANLELAILTGDPRQSTHHESNEEALISKLPPATTIYSTLSRYYINA 795

Query: 1699 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 1520
            THRNSK+LANKLGVYS+NSCPL VTYGFQP PGMHLLVPSL+KKAAFTD GHKVSTYAGC
Sbjct: 796  THRNSKYLANKLGVYSANSCPLNVTYGFQPLPGMHLLVPSLVKKAAFTDVGHKVSTYAGC 855

Query: 1519 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 1340
            QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF
Sbjct: 856  QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 915

Query: 1339 LSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGH 1160
            LSLVREDKI EF A               PVE+  TTLDDFKE L DKF+REIFT   GH
Sbjct: 916  LSLVREDKITEFQAPEDAPKPVTPPVTHFPVEEPATTLDDFKEELHDKFDREIFTSDRGH 975

Query: 1159 TNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYH 980
            TNCVQ DDPT QLFSHQQAKDEALLWETIKARLTISTPEAN++EFRAKKDLGDILWANYH
Sbjct: 976  TNCVQTDDPTIQLFSHQQAKDEALLWETIKARLTISTPEANIDEFRAKKDLGDILWANYH 1035

Query: 979  KAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQW 800
            +AM LPKEQP+FSEDLWTRCAEEVQNTYLKKS++Q+KGGERRQSPDFHEHQILIFLKSQW
Sbjct: 1036 RAMGLPKEQPDFSEDLWTRCAEEVQNTYLKKSLAQLKGGERRQSPDFHEHQILIFLKSQW 1095

Query: 799  VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 620
            VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLS
Sbjct: 1096 VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALGPNNIMINCEKTPQDLS 1155

Query: 619  RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 440
            RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF
Sbjct: 1156 RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 1215

Query: 439  LGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFTL 260
            +GTLSIMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF L
Sbjct: 1216 MGTLSIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFAL 1275

Query: 259  LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 80
            LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ+KAGVKDAI
Sbjct: 1276 LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQRKAGVKDAI 1335

Query: 79   SNVIANYSLDAKLAYSLGDDLQELLS 2
            +NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1336 ANVVANYSLDAKLAYSLGDDLQDLLS 1361


>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score = 1993 bits (5162), Expect = 0.0
 Identities = 983/1166 (84%), Positives = 1045/1166 (89%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFHKYDQLEWLT+GHL A NQPT+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTIGHLQAPNQPTVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTT+ YVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTDPYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEF ASLDSHTCFEDVLSGNL+QRLLRPLR+D+Q
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFAASLDSHTCFEDVLSGNLLQRLLRPLRADMQ 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            R+L FFRGRPSFVKLIKALDWQPITLEFPVR VNTRLRGPPGF +PFT+P PVNP+DA+T
Sbjct: 376  RILHFFRGRPSFVKLIKALDWQPITLEFPVRRVNTRLRGPPGFLSPFTRPQPVNPDDAET 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
              +FREF      S   T+ + LE S E+  +HTSLKV    LS EQL ALHELG++R G
Sbjct: 436  TESFREFIQPLNPSPTATVTEMLENSTESDVTHTSLKVVPQSLSPEQLSALHELGNSRCG 495

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGDHADQAPVNSDPATLPWVAWLPKL 2420
            GP+LP+ + +                T  ++ L +  H  Q    + P      +   K 
Sbjct: 496  GPMLPKRSSNH---------------THTSSDLLRRRHPRQQRSTNPPMG----SLAAKA 536

Query: 2419 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTPW 2240
              +GFEALEIQTDPSTG+ IMPI D R+LP+A +P HW  P   K++ TLR+LNRFPTPW
Sbjct: 537  KRIGFEALEIQTDPSTGQPIMPITDTRELPRAIMPAHWDSPQFEKIIATLRNLNRFPTPW 596

Query: 2239 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 2060
             PDRARARAFTSDVKNSRTGKALHRE+QTWKETQTMLT+N   + AISVIHGAGGSGKSQ
Sbjct: 597  SPDRARARAFTSDVKNSRTGKALHRESQTWKETQTMLTDNAEIHTAISVIHGAGGSGKSQ 656

Query: 2059 ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1880
            ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFV S+ PVVIFDDYG
Sbjct: 657  ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVSSRGPVVIFDDYG 716

Query: 1879 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYINA 1700
            KLPQGYIEAFAMTHA+LEL+ILTGDPRQSTHHEANEEALISKL+PATT F+ELSRYYINA
Sbjct: 717  KLPQGYIEAFAMTHANLELIILTGDPRQSTHHEANEEALISKLSPATTTFSELSRYYINA 776

Query: 1699 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 1520
            THRNSKFLANKLG+YSSN CPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 777  THRNSKFLANKLGIYSSNHCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGC 836

Query: 1519 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 1340
            QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDS HFVNSNAQSSAFWEKLEATPYLKTF
Sbjct: 837  QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSNHFVNSNAQSSAFWEKLEATPYLKTF 896

Query: 1339 LSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGH 1160
            LSLVREDKIEEFSA               PVE+ TT LDDF+E L DKF+REIFTEAHGH
Sbjct: 897  LSLVREDKIEEFSAPPDPPKSVMPPVTHFPVEECTTALDDFREELHDKFDREIFTEAHGH 956

Query: 1159 TNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYH 980
            TNCVQ DDPTTQLFSHQQAKDEALLWETIKARLTISTPEAN+EEFRAKKDLGDILW NYH
Sbjct: 957  TNCVQTDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWTNYH 1016

Query: 979  KAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQW 800
            KAM LPKEQP+FSE+LWTRCAEEVQNTYLKKS++Q+KGGERRQSPDFHEHQILIFLKSQW
Sbjct: 1017 KAMNLPKEQPDFSEELWTRCAEEVQNTYLKKSLNQLKGGERRQSPDFHEHQILIFLKSQW 1076

Query: 799  VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 620
            VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS
Sbjct: 1077 VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 1136

Query: 619  RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 440
            RWVL+YWDFSKP+YANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF
Sbjct: 1137 RWVLSYWDFSKPAYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 1196

Query: 439  LGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFTL 260
            LGTLSIMRLTGEGPTFDANTECNIAYTHTRF IPEGTAQIYAGDDCAIAQVCPEKPSF L
Sbjct: 1197 LGTLSIMRLTGEGPTFDANTECNIAYTHTRFNIPEGTAQIYAGDDCAIAQVCPEKPSFAL 1256

Query: 259  LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 80
            LK+RIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI
Sbjct: 1257 LKDRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 1316

Query: 79   SNVIANYSLDAKLAYSLGDDLQELLS 2
            +NV+ANYSLDAKLAYSLGD+L +LLS
Sbjct: 1317 TNVVANYSLDAKLAYSLGDELHDLLS 1342


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1981 bits (5133), Expect = 0.0
 Identities = 981/1166 (84%), Positives = 1036/1166 (88%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT   Q T+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS + 
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLT 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA+T
Sbjct: 376  QLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAET 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
             ++F+ F          T+  +L   +E    H SL +    L   QL ALHELG+ R G
Sbjct: 436  TQSFQAFCQAT-----ATVEATLAQQSETPDEHQSLSLKCPTLPEHQLWALHELGNARCG 490

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGDHADQAPVNSDPATLPWVAWLPKL 2420
            GPLLP+       +E                  ++   +   P   DP+TLPWVAWLPKL
Sbjct: 491  GPLLPKGPAKLTRAEPCPDLPAEPQAVPEPP--HKTTQSSDLPHPQDPSTLPWVAWLPKL 548

Query: 2419 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTPW 2240
            NALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW+ P + ++L+TLRSLNR+PTPW
Sbjct: 549  NALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRSLNRYPTPW 608

Query: 2239 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 2060
             PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN   NLAISVIHGAGGSGKSQ
Sbjct: 609  NPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNLAISVIHGAGGSGKSQ 668

Query: 2059 ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1880
            ALQTLLRQ P+LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYG
Sbjct: 669  ALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYG 728

Query: 1879 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYINA 1700
            KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IF+ELSRYYINA
Sbjct: 729  KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINA 788

Query: 1699 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 1520
            THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 789  THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGC 848

Query: 1519 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 1340
            QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF
Sbjct: 849  QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 908

Query: 1339 LSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGH 1160
            LSLVREDKIEEF+A               PVED TTTLDDFKE L DKF+REIF  AHGH
Sbjct: 909  LSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGH 968

Query: 1159 TNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYH 980
            TNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY 
Sbjct: 969  TNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYR 1028

Query: 979  KAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQW 800
            KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQILIFLKSQW
Sbjct: 1029 KAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQW 1088

Query: 799  VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 620
            VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLS
Sbjct: 1089 VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLS 1148

Query: 619  RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 440
            RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF
Sbjct: 1149 RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 1208

Query: 439  LGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFTL 260
            +GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+L
Sbjct: 1209 MGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSL 1268

Query: 259  LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 80
            LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI
Sbjct: 1269 LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 1328

Query: 79   SNVIANYSLDAKLAYSLGDDLQELLS 2
            +NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1329 TNVVANYSLDAKLAYSLGDDLQDLLS 1354


>gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1980 bits (5130), Expect = 0.0
 Identities = 980/1167 (83%), Positives = 1041/1167 (89%), Gaps = 1/1167 (0%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTA    T+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S   
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSGAT 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 376  QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAET 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
              +F+ F   A       +   LE  AE    H SL++    LS  QL ALHELG+ R G
Sbjct: 436  THSFQAFCQAA-----AAVETILEQQAETPDEHQSLRLDCPTLSEHQLWALHELGNARCG 490

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGD-HADQAPVNSDPATLPWVAWLPK 2423
            GPLLP+  PD   S            T A    +Q +  A   P   DP TLPWVAWLPK
Sbjct: 491  GPLLPQ-RPDT--STVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWLPK 547

Query: 2422 LNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTP 2243
            LNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW+ P + ++++TLRSLNR+PTP
Sbjct: 548  LNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTP 607

Query: 2242 WCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKS 2063
            W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   NLAISVIHGAGGSGKS
Sbjct: 608  WNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTNLAISVIHGAGGSGKS 667

Query: 2062 QALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDY 1883
            QALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDY
Sbjct: 668  QALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDY 727

Query: 1882 GKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYIN 1703
            GKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIF+ELSRYYIN
Sbjct: 728  GKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYIN 787

Query: 1702 ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAG 1523
            ATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKKAAFTDAGHKVSTYAG
Sbjct: 788  ATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAG 847

Query: 1522 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKT 1343
            CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKT
Sbjct: 848  CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKT 907

Query: 1342 FLSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHG 1163
            FLSLVRED++ EFSA               PVED TTTLDDF+E L DKF+REIF +AHG
Sbjct: 908  FLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHG 967

Query: 1162 HTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANY 983
            HTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEANL EFRAKKDLGDILW NY
Sbjct: 968  HTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLGDILWENY 1027

Query: 982  HKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQ 803
             KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS++QIKGG+RRQSPDFHEHQILIFLKSQ
Sbjct: 1028 RKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQ 1087

Query: 802  WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDL 623
            WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDL
Sbjct: 1088 WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDL 1147

Query: 622  SRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI 443
            SRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI
Sbjct: 1148 SRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI 1207

Query: 442  FLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFT 263
            FLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEKPSF+
Sbjct: 1208 FLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEKPSFS 1267

Query: 262  LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA 83
            LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA
Sbjct: 1268 LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA 1327

Query: 82   ISNVIANYSLDAKLAYSLGDDLQELLS 2
            I+NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1328 ITNVVANYSLDAKLAYSLGDDLQDLLS 1354


>emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1980 bits (5130), Expect = 0.0
 Identities = 980/1167 (83%), Positives = 1041/1167 (89%), Gaps = 1/1167 (0%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTA    T+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S   
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSGAT 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 376  QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAET 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
              +F+ F   A       +   LE  AE    H SL++    LS  QL ALHELG+ R G
Sbjct: 436  THSFQAFCQAA-----AAVETILEQQAETPDEHQSLRLDCPTLSEHQLWALHELGNARCG 490

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGD-HADQAPVNSDPATLPWVAWLPK 2423
            GPLLP+  PD   S            T A    +Q +  A   P   DP TLPWVAWLPK
Sbjct: 491  GPLLPQ-RPDT--STVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWLPK 547

Query: 2422 LNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTP 2243
            LNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW+ P + ++++TLRSLNR+PTP
Sbjct: 548  LNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTP 607

Query: 2242 WCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKS 2063
            W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   NLAISVIHGAGGSGKS
Sbjct: 608  WNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTNLAISVIHGAGGSGKS 667

Query: 2062 QALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDY 1883
            QALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDY
Sbjct: 668  QALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDY 727

Query: 1882 GKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYIN 1703
            GKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIF+ELSRYYIN
Sbjct: 728  GKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYIN 787

Query: 1702 ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAG 1523
            ATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKKAAFTDAGHKVSTYAG
Sbjct: 788  ATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAG 847

Query: 1522 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKT 1343
            CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKT
Sbjct: 848  CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKT 907

Query: 1342 FLSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHG 1163
            FLSLVRED++ EFSA               PVED TTTLDDF+E L DKF+REIF +AHG
Sbjct: 908  FLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHG 967

Query: 1162 HTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANY 983
            HTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEANL EFRAKKDLGDILW NY
Sbjct: 968  HTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLGDILWENY 1027

Query: 982  HKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQ 803
             KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS++QIKGG+RRQSPDFHEHQILIFLKSQ
Sbjct: 1028 RKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQ 1087

Query: 802  WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDL 623
            WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDL
Sbjct: 1088 WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDL 1147

Query: 622  SRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI 443
            SRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI
Sbjct: 1148 SRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI 1207

Query: 442  FLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFT 263
            FLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEKPSF+
Sbjct: 1208 FLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEKPSFS 1267

Query: 262  LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA 83
            LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA
Sbjct: 1268 LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA 1327

Query: 82   ISNVIANYSLDAKLAYSLGDDLQELLS 2
            I+NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1328 ITNVVANYSLDAKLAYSLGDDLQDLLS 1354


>gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
 gb|AMY62708.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1979 bits (5128), Expect = 0.0
 Identities = 974/1166 (83%), Positives = 1037/1166 (88%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTA   PT+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLPTVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S   
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSSAT 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 376  QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAET 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
              +F+ F   A       +   LE  AE    H SL++    LS  QL ALH LG+ R G
Sbjct: 436  THSFQAFCQAA-----AAVETILEQQAETPDEHQSLRLDCPTLSEHQLWALHALGNARCG 490

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGDHADQAPVNSDPATLPWVAWLPKL 2420
            GPLLP+  PD   +                 +  +   A   P   DP TLPWVAWLPKL
Sbjct: 491  GPLLPQ-RPDTSTAVEPCPDLPPETHAAPEPS-QRNTQAPNLPSPQDPTTLPWVAWLPKL 548

Query: 2419 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTPW 2240
            NALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW+ P + ++++TLRSLNR+PTPW
Sbjct: 549  NALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTPW 608

Query: 2239 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 2060
             PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   N+AISVIHGAGGSGKSQ
Sbjct: 609  NPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTNVAISVIHGAGGSGKSQ 668

Query: 2059 ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1880
            ALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYG
Sbjct: 669  ALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYG 728

Query: 1879 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYINA 1700
            KLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIF+ELSRYYINA
Sbjct: 729  KLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYINA 788

Query: 1699 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 1520
            THRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKKAAFTDAGHK STYAGC
Sbjct: 789  THRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKASTYAGC 848

Query: 1519 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 1340
            QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKTF
Sbjct: 849  QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKTF 908

Query: 1339 LSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGH 1160
            LSLVRED++ EFSA               PVED TTTLDDF+E L DKF+REIF +AHGH
Sbjct: 909  LSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHGH 968

Query: 1159 TNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYH 980
            TNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEANL EFRAKKDLGDILW NY 
Sbjct: 969  TNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLGDILWENYR 1028

Query: 979  KAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQW 800
            KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS++QIKGG+RRQSPDFHEHQILIFLKSQW
Sbjct: 1029 KAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQW 1088

Query: 799  VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 620
            VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLS
Sbjct: 1089 VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLS 1148

Query: 619  RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 440
            RWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF
Sbjct: 1149 RWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 1208

Query: 439  LGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFTL 260
            LGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEKPSF+L
Sbjct: 1209 LGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEKPSFSL 1268

Query: 259  LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 80
            LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI
Sbjct: 1269 LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 1328

Query: 79   SNVIANYSLDAKLAYSLGDDLQELLS 2
            +NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1329 TNVVANYSLDAKLAYSLGDDLQDLLS 1354


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1977 bits (5123), Expect = 0.0
 Identities = 979/1166 (83%), Positives = 1035/1166 (88%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT   Q T+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS + 
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLT 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA+T
Sbjct: 376  QLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAET 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
             ++F+ F          T+  +L   +E    H SL +  + L   QL ALHELG+ R G
Sbjct: 436  TQSFQAFCQAT-----ATVEXTLAQQSETPDEHQSLSLKCSTLPEHQLWALHELGNARCG 490

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGDHADQAPVNSDPATLPWVAWLPKL 2420
            GPLLP+       +E                  ++   +   P   DP+TLPWVAWLPKL
Sbjct: 491  GPLLPKGPAKLTRAEPCPDLPAEPQAVPEPP--HKTTQSSDLPHPQDPSTLPWVAWLPKL 548

Query: 2419 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTPW 2240
            NALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW+ P + ++L+TLR LNR+PTPW
Sbjct: 549  NALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRGLNRYPTPW 608

Query: 2239 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 2060
             PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN   NLAISVIHGAGGSGKSQ
Sbjct: 609  NPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNLAISVIHGAGGSGKSQ 668

Query: 2059 ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1880
            ALQTLLRQ P+LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYG
Sbjct: 669  ALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYG 728

Query: 1879 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYINA 1700
            KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IF+ELSRYYINA
Sbjct: 729  KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINA 788

Query: 1699 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 1520
            THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 789  THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGC 848

Query: 1519 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 1340
            QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF
Sbjct: 849  QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 908

Query: 1339 LSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGH 1160
            LSLVREDKIEEF+A               PVED TTTLDDFKE L DKF+REIF  AHGH
Sbjct: 909  LSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGH 968

Query: 1159 TNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYH 980
            TNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY 
Sbjct: 969  TNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYR 1028

Query: 979  KAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQW 800
            KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQILIFLKSQW
Sbjct: 1029 KAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQW 1088

Query: 799  VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 620
            VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLS
Sbjct: 1089 VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLS 1148

Query: 619  RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 440
            RWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF
Sbjct: 1149 RWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 1208

Query: 439  LGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFTL 260
            +GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+L
Sbjct: 1209 MGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSL 1268

Query: 259  LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 80
            LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI
Sbjct: 1269 LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 1328

Query: 79   SNVIANYSLDAKLAYSLGDDLQELLS 2
            +NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1329 TNVVANYSLDAKLAYSLGDDLQDLLS 1354


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1977 bits (5122), Expect = 0.0
 Identities = 979/1166 (83%), Positives = 1035/1166 (88%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT   Q T+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS + 
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLT 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA+T
Sbjct: 376  QLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAET 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
             ++F+ F          T+  +L   +E    H SL +  + L   QL ALHELG+ R G
Sbjct: 436  TQSFQAFCQAT-----ATVEATLAQQSETPDEHQSLSLKCSTLPEHQLWALHELGNARCG 490

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGDHADQAPVNSDPATLPWVAWLPKL 2420
            GPLLP+       +E                  ++   +   P   DP+TLPWVAWLPKL
Sbjct: 491  GPLLPKGPAKLTRAEPCPDLPAEPQAVPEPP--HKTTQSSDLPHPQDPSTLPWVAWLPKL 548

Query: 2419 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTPW 2240
            NALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW+ P + ++L+TLR LNR+PTPW
Sbjct: 549  NALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRGLNRYPTPW 608

Query: 2239 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 2060
             PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN   NLAISVIHGAGGSGKSQ
Sbjct: 609  NPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNLAISVIHGAGGSGKSQ 668

Query: 2059 ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1880
            ALQTLLRQ P+LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYG
Sbjct: 669  ALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYG 728

Query: 1879 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYINA 1700
            KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IF+ELSRYYINA
Sbjct: 729  KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINA 788

Query: 1699 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 1520
            THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 789  THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGC 848

Query: 1519 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 1340
            QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF
Sbjct: 849  QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 908

Query: 1339 LSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGH 1160
            LSLVREDKIEEF+A               PVED TTTLDDFKE L DKF+REIF  AHGH
Sbjct: 909  LSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGH 968

Query: 1159 TNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYH 980
            TNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY 
Sbjct: 969  TNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYR 1028

Query: 979  KAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQW 800
            KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQILIFLKSQW
Sbjct: 1029 KAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQW 1088

Query: 799  VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 620
            VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLS
Sbjct: 1089 VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLS 1148

Query: 619  RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 440
            RWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF
Sbjct: 1149 RWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 1208

Query: 439  LGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFTL 260
            +GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+L
Sbjct: 1209 MGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSL 1268

Query: 259  LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 80
            LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI
Sbjct: 1269 LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 1328

Query: 79   SNVIANYSLDAKLAYSLGDDLQELLS 2
            +NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1329 TNVVANYSLDAKLAYSLGDDLQDLLS 1354


>gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1977 bits (5122), Expect = 0.0
 Identities = 976/1167 (83%), Positives = 1041/1167 (89%), Gaps = 1/1167 (0%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTA    T+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S   
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSGAT 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PF +P PVNP+DA+T
Sbjct: 376  QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFARPQPVNPDDAET 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
              +F+ F           +   LE SAE    H SL++    LS  QL ALHELG+TR G
Sbjct: 436  THSFQAFCQAT-----AAVGTILEQSAETPDEHQSLRLNCPTLSEHQLWALHELGNTRCG 490

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGD-HADQAPVNSDPATLPWVAWLPK 2423
            GPLLP+  PD   S            T A    +Q +  A   P   DP TLPWVAWLPK
Sbjct: 491  GPLLPQ-RPDT--STVVEPCPDLPPETHAAPEPSQRNTQAPDLPSPQDPTTLPWVAWLPK 547

Query: 2422 LNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTP 2243
            LNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW+ P + ++++TLRS+NR+PTP
Sbjct: 548  LNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSINRYPTP 607

Query: 2242 WCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKS 2063
            W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   NLA+SVIHGAGGSGKS
Sbjct: 608  WNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTNLAVSVIHGAGGSGKS 667

Query: 2062 QALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDY 1883
            QALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDY
Sbjct: 668  QALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDY 727

Query: 1882 GKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYIN 1703
            GKLPQGY+EAFAMTHA+LELVILTGDPRQSTHHEANEEALISKL PATTIF+ELSRYYIN
Sbjct: 728  GKLPQGYLEAFAMTHANLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYIN 787

Query: 1702 ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAG 1523
            ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSLMKKAAFTDAGHKVSTYAG
Sbjct: 788  ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAG 847

Query: 1522 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKT 1343
            CQGITAPRVQILLD+DTTMCTKEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKT
Sbjct: 848  CQGITAPRVQILLDSDTTMCTKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKT 907

Query: 1342 FLSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHG 1163
            FLSLVRED++ EFSA               PVED TTTLDDF+E L DKF+REIF +AHG
Sbjct: 908  FLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHG 967

Query: 1162 HTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANY 983
            +TNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS PEANL EFRAKKDLGDILW NY
Sbjct: 968  YTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISNPEANLAEFRAKKDLGDILWENY 1027

Query: 982  HKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQ 803
             KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS++QIKGG+RRQSPDFHEHQILIFLKSQ
Sbjct: 1028 RKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQ 1087

Query: 802  WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDL 623
            WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDL
Sbjct: 1088 WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDL 1147

Query: 622  SRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI 443
            SRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI
Sbjct: 1148 SRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI 1207

Query: 442  FLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFT 263
            FLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEKPSF+
Sbjct: 1208 FLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEKPSFS 1267

Query: 262  LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA 83
            LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA
Sbjct: 1268 LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA 1327

Query: 82   ISNVIANYSLDAKLAYSLGDDLQELLS 2
            I+NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1328 ITNVVANYSLDAKLAYSLGDDLQDLLS 1354


>gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1977 bits (5121), Expect = 0.0
 Identities = 978/1167 (83%), Positives = 1040/1167 (89%), Gaps = 1/1167 (0%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTA    T+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S   
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSGAT 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            ++L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 376  QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVDTLLRGPPGFDSPFTRPQPVNPDDAET 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
              +F+ F   A       +   LE  AE    H SL++    LS  QL ALHELG+ R G
Sbjct: 436  THSFQAFCQAA-----AAVETILEQQAETPDEHQSLRLDCPTLSEHQLWALHELGNARCG 490

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGD-HADQAPVNSDPATLPWVAWLPK 2423
            GPLLP+  PD   S            T A    +Q +  A   P   DP TLPWVAWLPK
Sbjct: 491  GPLLPQ-RPDT--STVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWLPK 547

Query: 2422 LNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTP 2243
            LNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW+ P + ++++TLRSLNR+PTP
Sbjct: 548  LNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTP 607

Query: 2242 WCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKS 2063
            W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   NLAISVIHGAGGSGKS
Sbjct: 608  WNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTNLAISVIHGAGGSGKS 667

Query: 2062 QALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDY 1883
            QALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDY
Sbjct: 668  QALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDY 727

Query: 1882 GKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYIN 1703
            GKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIF+ELSRYYIN
Sbjct: 728  GKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYIN 787

Query: 1702 ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAG 1523
            ATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKKAAFTDAGHK STYAG
Sbjct: 788  ATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKASTYAG 847

Query: 1522 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKT 1343
            CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKT
Sbjct: 848  CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKT 907

Query: 1342 FLSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHG 1163
            FLSLVRED++ EFSA               PVED TTTLDDF+E L DKF+REIF +AHG
Sbjct: 908  FLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHG 967

Query: 1162 HTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANY 983
            HTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEANL EFRAKKDLGDILW NY
Sbjct: 968  HTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLGDILWENY 1027

Query: 982  HKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQ 803
             KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS++QIKGG+RRQSPDFHEHQILIFLKSQ
Sbjct: 1028 RKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQ 1087

Query: 802  WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDL 623
            WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDL
Sbjct: 1088 WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDL 1147

Query: 622  SRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI 443
            SRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI
Sbjct: 1148 SRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI 1207

Query: 442  FLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFT 263
            FLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEKPSF+
Sbjct: 1208 FLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEKPSFS 1267

Query: 262  LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA 83
            LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA
Sbjct: 1268 LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA 1327

Query: 82   ISNVIANYSLDAKLAYSLGDDLQELLS 2
            I+NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1328 ITNVVANYSLDAKLAYSLGDDLQDLLS 1354


>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1976 bits (5119), Expect = 0.0
 Identities = 979/1166 (83%), Positives = 1034/1166 (88%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLT   Q T+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTTEHYVTVPD+FLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTEHYVTVPDVFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL+S I 
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLKSGIT 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA+T
Sbjct: 376  QLLNFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAET 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
             ++F+ F     T+       +LE  AE    H SL +    L   QL ALHELG+TR G
Sbjct: 436  TQSFQAFCQATITAEA-----ALEQQAETPDEHQSLSLKCPTLPEHQLWALHELGNTRCG 490

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGDHADQAPVNSDPATLPWVAWLPKL 2420
            GPLLP+  P +  +                         D  P   DP TLPWVAWLPKL
Sbjct: 491  GPLLPK-GPAKLTTVEPCPDLPAENSANPEPPRKTTQTLD-LPHPEDPTTLPWVAWLPKL 548

Query: 2419 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTPW 2240
            NALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW+ P + ++++TLRS NR+PTPW
Sbjct: 549  NALGFEALEIQTDPSTGEMIMPITDTRELPRAEGHAHWQGPDMERIISTLRSFNRYPTPW 608

Query: 2239 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 2060
             PDR+RA+AFTSDVKNSRTGKALHRE+Q WKETQTML EN   NLAISVIHGAGGSGKSQ
Sbjct: 609  NPDRSRAKAFTSDVKNSRTGKALHRESQVWKETQTMLAENSQTNLAISVIHGAGGSGKSQ 668

Query: 2059 ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1880
            ALQTLLRQ P+LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYG
Sbjct: 669  ALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYG 728

Query: 1879 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYINA 1700
            KLPQGY+EAFA+THASLELVILTGDPRQSTHHE+NEEALISKL PAT IF+ELSRYYINA
Sbjct: 729  KLPQGYLEAFALTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINA 788

Query: 1699 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 1520
            THRNSKFLANKLGVYSSN CPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 789  THRNSKFLANKLGVYSSNPCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGC 848

Query: 1519 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 1340
            QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF
Sbjct: 849  QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 908

Query: 1339 LSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGH 1160
            LSLVREDKIEEF+A               PVED TTTLDDFKE L DKF+REIF   HGH
Sbjct: 909  LSLVREDKIEEFTATTAEAKPVAPPCTHFPVEDGTTTLDDFKEELHDKFDREIFNPTHGH 968

Query: 1159 TNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYH 980
            TNCVQ DDPTTQLFSHQQAKDEALLWETI ARLTIS PEANL EFRAKKDLGDILW NY 
Sbjct: 969  TNCVQTDDPTTQLFSHQQAKDEALLWETINARLTISNPEANLAEFRAKKDLGDILWENYR 1028

Query: 979  KAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQW 800
            KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQILIFLKSQW
Sbjct: 1029 KAMKLPNEQPDFSEDLWIRCAEEVQNTYLKKSVAQIKGGERRQSPDFHEHQILIFLKSQW 1088

Query: 799  VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 620
            VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFR+ALSPNNIMINCEKTPQDLS
Sbjct: 1089 VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFREALSPNNIMINCEKTPQDLS 1148

Query: 619  RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 440
            RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF
Sbjct: 1149 RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 1208

Query: 439  LGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFTL 260
            LGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+L
Sbjct: 1209 LGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSL 1268

Query: 259  LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 80
            LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI
Sbjct: 1269 LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 1328

Query: 79   SNVIANYSLDAKLAYSLGDDLQELLS 2
            +NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1329 TNVVANYSLDAKLAYSLGDDLQDLLS 1354


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1976 bits (5119), Expect = 0.0
 Identities = 978/1166 (83%), Positives = 1034/1166 (88%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT   Q T+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS + 
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLT 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA+T
Sbjct: 376  QLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAET 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
             ++F+ F          T+  +L   +E    H SL +    L   QL ALHELG+ R G
Sbjct: 436  TQSFQAFCQAT-----ATVEATLAQQSETPDEHQSLSLKCPTLPEHQLWALHELGNARCG 490

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGDHADQAPVNSDPATLPWVAWLPKL 2420
            GPLLP+       +E                  ++   +   P   DP+TLPWVAWLPKL
Sbjct: 491  GPLLPKGPAKLTRAEPCPDLPAEPQAVPEPP--HKTTQSSDLPHPQDPSTLPWVAWLPKL 548

Query: 2419 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTPW 2240
            NALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW+ P + ++L+TLRSLNR+PTPW
Sbjct: 549  NALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRSLNRYPTPW 608

Query: 2239 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 2060
             PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN   NLAISVIHGAGGSGKSQ
Sbjct: 609  NPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNLAISVIHGAGGSGKSQ 668

Query: 2059 ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1880
            ALQTLLRQ P+LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYG
Sbjct: 669  ALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYG 728

Query: 1879 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYINA 1700
            KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IF+ELSRYYINA
Sbjct: 729  KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINA 788

Query: 1699 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 1520
            THRNSK LANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 789  THRNSKLLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGC 848

Query: 1519 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 1340
            QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF
Sbjct: 849  QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 908

Query: 1339 LSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGH 1160
            LSLVREDKIEEF+A               PVED TTTLDDFKE L DKF+REIF  AHGH
Sbjct: 909  LSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGH 968

Query: 1159 TNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYH 980
            TNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY 
Sbjct: 969  TNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYR 1028

Query: 979  KAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQW 800
            KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEH ILIFLKSQW
Sbjct: 1029 KAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHHILIFLKSQW 1088

Query: 799  VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 620
            VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCE+TPQDLS
Sbjct: 1089 VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCERTPQDLS 1148

Query: 619  RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 440
            RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF
Sbjct: 1149 RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 1208

Query: 439  LGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFTL 260
            +GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+L
Sbjct: 1209 MGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSL 1268

Query: 259  LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 80
            LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI
Sbjct: 1269 LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 1328

Query: 79   SNVIANYSLDAKLAYSLGDDLQELLS 2
            +NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1329 TNVVANYSLDAKLAYSLGDDLQDLLS 1354


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1975 bits (5116), Expect = 0.0
 Identities = 978/1166 (83%), Positives = 1034/1166 (88%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT   Q T+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS + 
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLT 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA+T
Sbjct: 376  QLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAET 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
             ++F+ F          T+  +L   +E    H SL +  + L   QL ALHELG+ R G
Sbjct: 436  TQSFQAFCQAT-----ATVEATLAQQSETPDEHQSLSLKCSTLPEHQLWALHELGNARCG 490

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGDHADQAPVNSDPATLPWVAWLPKL 2420
             PLLP+       +E                  ++   +   P   DP+TLPWVAWLPKL
Sbjct: 491  APLLPKGPAKLTRAEPCPDLPAEPQAVPEPP--HKTTQSSDLPHPQDPSTLPWVAWLPKL 548

Query: 2419 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTPW 2240
            NALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW+ P + ++L+TLR LNR+PTPW
Sbjct: 549  NALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRGLNRYPTPW 608

Query: 2239 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 2060
             PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN   NLAISVIHGAGGSGKSQ
Sbjct: 609  NPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNLAISVIHGAGGSGKSQ 668

Query: 2059 ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1880
            ALQTLLRQ P+LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYG
Sbjct: 669  ALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYG 728

Query: 1879 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYINA 1700
            KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IF+ELSRYYINA
Sbjct: 729  KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINA 788

Query: 1699 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 1520
            THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 789  THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGC 848

Query: 1519 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 1340
            QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF
Sbjct: 849  QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 908

Query: 1339 LSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGH 1160
            LSLVREDKIEEF+A               PVED TTTLDDFKE L DKF+REIF  AHGH
Sbjct: 909  LSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGH 968

Query: 1159 TNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYH 980
            TNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY 
Sbjct: 969  TNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYR 1028

Query: 979  KAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQW 800
            KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQILIFLKSQW
Sbjct: 1029 KAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQW 1088

Query: 799  VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 620
            VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLS
Sbjct: 1089 VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLS 1148

Query: 619  RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 440
            RWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF
Sbjct: 1149 RWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 1208

Query: 439  LGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFTL 260
            +GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+L
Sbjct: 1209 MGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSL 1268

Query: 259  LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 80
            LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI
Sbjct: 1269 LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 1328

Query: 79   SNVIANYSLDAKLAYSLGDDLQELLS 2
            +NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1329 TNVVANYSLDAKLAYSLGDDLQDLLS 1354


>gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1974 bits (5114), Expect = 0.0
 Identities = 977/1167 (83%), Positives = 1038/1167 (88%), Gaps = 1/1167 (0%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTA    T+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S   
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSGAT 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 376  QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAET 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
              +F+ F   A       +   LE  AE    H SL++    LS  QL ALHELG+ R G
Sbjct: 436  THSFQAFCQAA-----AAVETILEQQAETPDEHXSLRLDCPTLSEHQLWALHELGNARCG 490

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGD-HADQAPVNSDPATLPWVAWLPK 2423
            GPLLP+  PD   S            T A    +Q +  A   P   DP TLPWVAWLPK
Sbjct: 491  GPLLPQ-RPDT--STVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWLPK 547

Query: 2422 LNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTP 2243
            LNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW+ P + ++++TLRSLNR+PTP
Sbjct: 548  LNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTP 607

Query: 2242 WCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKS 2063
            W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   NLAISVIHGAGGSGKS
Sbjct: 608  WNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTNLAISVIHGAGGSGKS 667

Query: 2062 QALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDY 1883
            QALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDY
Sbjct: 668  QALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDY 727

Query: 1882 GKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYIN 1703
            GKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIF+ELSRYYIN
Sbjct: 728  GKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYIN 787

Query: 1702 ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAG 1523
            ATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSL KKAAFTDAGHK STYAG
Sbjct: 788  ATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLXKKAAFTDAGHKASTYAG 847

Query: 1522 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKT 1343
            CQGITAPRVQILLDNDTTMC KEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKT
Sbjct: 848  CQGITAPRVQILLDNDTTMCXKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKT 907

Query: 1342 FLSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHG 1163
            FLSLVRED++ EFSA               PVED TTTLDDF+E L DKF+REIF +AHG
Sbjct: 908  FLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHG 967

Query: 1162 HTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANY 983
            HTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEANL EFRAKKDLGDILW NY
Sbjct: 968  HTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLGDILWENY 1027

Query: 982  HKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQ 803
             KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS++QIKGG+RRQSPDFHEHQILIFLKSQ
Sbjct: 1028 RKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQ 1087

Query: 802  WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDL 623
            WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDL
Sbjct: 1088 WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDL 1147

Query: 622  SRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI 443
            SRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI
Sbjct: 1148 SRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI 1207

Query: 442  FLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFT 263
            FLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEKPSF+
Sbjct: 1208 FLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEKPSFS 1267

Query: 262  LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA 83
            LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA
Sbjct: 1268 LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA 1327

Query: 82   ISNVIANYSLDAKLAYSLGDDLQELLS 2
            I+NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1328 ITNVVANYSLDAKLAYSLGDDLQDLLS 1354


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1971 bits (5107), Expect = 0.0
 Identities = 976/1166 (83%), Positives = 1033/1166 (88%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT   Q T+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS + 
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLT 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA+T
Sbjct: 376  QLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAET 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
             ++F+ F          T+  +L   +E    H SL +    L   QL ALHELG+ R G
Sbjct: 436  TQSFQAFCQAT-----ATVEATLAQQSETPDEHQSLSLKCPTLPEHQLWALHELGNARCG 490

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGDHADQAPVNSDPATLPWVAWLPKL 2420
            GPLLP+       +E                  ++   +   P   DP+TLPWVAWLPKL
Sbjct: 491  GPLLPKGPAKLTRAEPCPDLPAEPQAVPEPP--HKTTQSSDLPHPQDPSTLPWVAWLPKL 548

Query: 2419 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTPW 2240
            NALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW+ P ++++L+TLRSLNR+PTPW
Sbjct: 549  NALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMARILSTLRSLNRYPTPW 608

Query: 2239 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 2060
             PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQ MLTEN   NLAISVIHGAGGSGKSQ
Sbjct: 609  NPDRARAKAFTSDVKNSRTGKALHRESQVWKETQAMLTENSQTNLAISVIHGAGGSGKSQ 668

Query: 2059 ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1880
            ALQTLLRQ P+LPIEVVLPTNELRLDW KKLPHNPPEQFRTFERAFVCS+ PVVIFDDYG
Sbjct: 669  ALQTLLRQYPNLPIEVVLPTNELRLDWPKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYG 728

Query: 1879 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYINA 1700
            KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IF+ELSRYYINA
Sbjct: 729  KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINA 788

Query: 1699 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 1520
            THRNSKFLANKLGVYSSNSCPLKVTYGFQP+PG+HLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 789  THRNSKFLANKLGVYSSNSCPLKVTYGFQPRPGLHLLVPSLVKKAAFTDAGHKVSTYAGC 848

Query: 1519 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 1340
            QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF
Sbjct: 849  QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 908

Query: 1339 LSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGH 1160
            LSLVREDKIEEF+A               PVED TTTLDDFKE L DKF+REIF  AHGH
Sbjct: 909  LSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGH 968

Query: 1159 TNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYH 980
            TNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY 
Sbjct: 969  TNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYR 1028

Query: 979  KAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQW 800
            KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQILIFLKSQW
Sbjct: 1029 KAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQW 1088

Query: 799  VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 620
            VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLS
Sbjct: 1089 VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLS 1148

Query: 619  RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 440
            RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF
Sbjct: 1149 RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 1208

Query: 439  LGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFTL 260
            +GTL+IMRLTGEGP FDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+L
Sbjct: 1209 MGTLTIMRLTGEGPAFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSL 1268

Query: 259  LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 80
            LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI
Sbjct: 1269 LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 1328

Query: 79   SNVIANYSLDAKLAYSLGDDLQELLS 2
            +NV+ NYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1329 TNVVDNYSLDAKLAYSLGDDLQDLLS 1354


>gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1971 bits (5107), Expect = 0.0
 Identities = 976/1171 (83%), Positives = 1039/1171 (88%), Gaps = 5/1171 (0%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTA    T+TAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSE TLLVNYFE TASLDSHTCFED+LSGNL+QR+LRPL S   
Sbjct: 316  AKFRQLISTKELQHYQPSETTLLVNYFELTASLDSHTCFEDILSGNLLQRILRPLTSGAT 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            ++L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPP F +PFT+P PVNP+DA+T
Sbjct: 376  QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVHTLLRGPPWFDSPFTRPQPVNPDDAET 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
               F+ F   A       +   LE  AE    H SL++    LS  QL +LHELG+ R G
Sbjct: 436  THIFQAFCQAA-----AAVETILEQQAETPEEHQSLRLDCPTLSEHQLWSLHELGNARCG 490

Query: 2599 GPLLPRIAPD-----EQDSEXXXXXXXXXXPTKANTTLNQGDHADQAPVNSDPATLPWVA 2435
            GPLLP+  PD     E   +          P++ NT       A   P   DP TLPWVA
Sbjct: 491  GPLLPQ-RPDTATVVEPCPDLPPETHAAPEPSQRNT------QAPNLPSPQDPTTLPWVA 543

Query: 2434 WLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNR 2255
            WLPKLNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW++P + ++++TLRSLNR
Sbjct: 544  WLPKLNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQDPDMEQIISTLRSLNR 603

Query: 2254 FPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGG 2075
            +PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   NLAISVIHGAGG
Sbjct: 604  YPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTNLAISVIHGAGG 663

Query: 2074 SGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVI 1895
            SGKSQALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVI
Sbjct: 664  SGKSQALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVI 723

Query: 1894 FDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSR 1715
            FDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIF+ELSR
Sbjct: 724  FDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSR 783

Query: 1714 YYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVS 1535
            YYINATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKKAAFTDAGHKVS
Sbjct: 784  YYINATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKVS 843

Query: 1534 TYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATP 1355
            TYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATP
Sbjct: 844  TYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATP 903

Query: 1354 YLKTFLSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFT 1175
            YLKTFLSLVREDK+ EFSA               PVED TTTLDDF+E L DKF+REIF 
Sbjct: 904  YLKTFLSLVREDKVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFN 963

Query: 1174 EAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDIL 995
            +AHGHTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEANL EFRAKKDLGDIL
Sbjct: 964  QAHGHTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLGDIL 1023

Query: 994  WANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIF 815
            W NY KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS++QIKGG+RRQSPDFHEHQILIF
Sbjct: 1024 WENYRKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIF 1083

Query: 814  LKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKT 635
            LKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKT
Sbjct: 1084 LKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKT 1143

Query: 634  PQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKL 455
            PQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKL
Sbjct: 1144 PQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKL 1203

Query: 454  SPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEK 275
            SPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEK
Sbjct: 1204 SPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEK 1263

Query: 274  PSFTLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAG 95
            PSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAG
Sbjct: 1264 PSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAG 1323

Query: 94   VKDAISNVIANYSLDAKLAYSLGDDLQELLS 2
            VKDAI+NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1324 VKDAITNVVANYSLDAKLAYSLGDDLQDLLS 1354


>gb|AVL84357.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1388

 Score = 1950 bits (5052), Expect = 0.0
 Identities = 962/1167 (82%), Positives = 1019/1167 (87%), Gaps = 1/1167 (0%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVG LT+  QPTITAQRLETKGANHLFIFQ
Sbjct: 196  LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGRLTSPGQPTITAQRLETKGANHLFIFQ 255

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNYLTPERRTF T +HYVTVP IFLPE YNCRTPISKT MMQMFFYIKSVKEAKERDIW
Sbjct: 256  RGNYLTPERRTFATNDHYVTVPHIFLPENYNCRTPISKTTMMQMFFYIKSVKEAKERDIW 315

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
            AKFRQLISTKELQHYQPSEITLLVNYFEFTA+LDSHTCFEDVLSGNL+QRLLRPLRSD Q
Sbjct: 316  AKFRQLISTKELQHYQPSEITLLVNYFEFTATLDSHTCFEDVLSGNLLQRLLRPLRSDFQ 375

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            R+LQFFRGRPSFVKLIKALDWQPITLEFPVR V T LRGPPGF +P T+P PVNPEDADT
Sbjct: 376  RILQFFRGRPSFVKLIKALDWQPITLEFPVRDVCTTLRGPPGFKSPLTRPQPVNPEDADT 435

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
             R+F++F+ T   S   T+ ++L+ +AE L  HT LKV    LS  QL A+H LG  R G
Sbjct: 436  SRSFQDFTRTTAASPKPTVEETLDATAERLDHHTQLKVHCDTLSERQLEAIHSLGHLRCG 495

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGDHADQAPVNSDPATLPWVAWLPKL 2420
            GPLLP + P    +E            +  T        D  P    P TLPWVAWLPKL
Sbjct: 496  GPLLPELTPRHAPAEPCPDLPPSPTKGQTETPSPSTSGPDLQPTTQAPETLPWVAWLPKL 555

Query: 2419 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTPW 2240
            NALGFEALE+Q DPSTGE+IMPI D R+LP+ATLP HW+   L+ +LTTLRSLNRFPTPW
Sbjct: 556  NALGFEALEVQHDPSTGEMIMPITDTRELPRATLPAHWQGSNLTSILTTLRSLNRFPTPW 615

Query: 2239 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 2060
             PDR RARAFTSDVKNSRTGKALHRE+QTWKETQT+L EN    LA+SVIHGAGGSGKSQ
Sbjct: 616  IPDRTRARAFTSDVKNSRTGKALHRESQTWKETQTLLAENTQVELALSVIHGAGGSGKSQ 675

Query: 2059 ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1880
            ALQTLLRQ+P LPIEV+LPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+SPVVIFDDYG
Sbjct: 676  ALQTLLRQDPSLPIEVILPTNELRLDWLKKLPHNPPEQFRTFERAFVCSQSPVVIFDDYG 735

Query: 1879 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTE-LSRYYIN 1703
            KLPQGY+EAFA+THA+LELVILTG P+              K +P      +  SRYYIN
Sbjct: 736  KLPQGYLEAFALTHANLELVILTGGPQAVHAPRVQRGGAHLKASPRPQPSIQPFSRYYIN 795

Query: 1702 ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAG 1523
            ATHRNSKFLANKLGVYS+NSCPL VTYGFQP PG+HLLVPSLMKKAAFTDAGHKVSTYAG
Sbjct: 796  ATHRNSKFLANKLGVYSANSCPLNVTYGFQPLPGLHLLVPSLMKKAAFTDAGHKVSTYAG 855

Query: 1522 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKT 1343
            CQGITAP+VQILLD+DTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKT
Sbjct: 856  CQGITAPKVQILLDSDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKT 915

Query: 1342 FLSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHG 1163
            FLSLVREDKI EF A               PVE+  TTLDDFKE L DKF+REIFT   G
Sbjct: 916  FLSLVREDKITEFQAPEGDPKPVAPPVTHFPVEEPATTLDDFKEELQDKFDREIFTNDRG 975

Query: 1162 HTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANY 983
            HTNCVQ DDPTTQLFSHQQAKDEALLW TIKARLTISTPEAN+EEFRAKKDLGDILW NY
Sbjct: 976  HTNCVQTDDPTTQLFSHQQAKDEALLWGTIKARLTISTPEANVEEFRAKKDLGDILWVNY 1035

Query: 982  HKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQ 803
            H+AM LPKEQP+FSEDLWTRCAEEVQNTYLKK+++Q+KGGERRQSPDFHEHQILIFLKSQ
Sbjct: 1036 HRAMGLPKEQPDFSEDLWTRCAEEVQNTYLKKTVAQLKGGERRQSPDFHEHQILIFLKSQ 1095

Query: 802  WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDL 623
            WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIM+NCEKTPQDL
Sbjct: 1096 WVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALCPNNIMVNCEKTPQDL 1155

Query: 622  SRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI 443
            SRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI
Sbjct: 1156 SRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKI 1215

Query: 442  FLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFT 263
            FLGTLSIMRLTGEGPTFDANTE NIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF 
Sbjct: 1216 FLGTLSIMRLTGEGPTFDANTERNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFA 1275

Query: 262  LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA 83
            LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA
Sbjct: 1276 LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDA 1335

Query: 82   ISNVIANYSLDAKLAYSLGDDLQELLS 2
            I+NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1336 ITNVVANYSLDAKLAYSLGDDLQDLLS 1362


>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
 sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA replication protein; AltName: Full=156 kDa protein;
            AltName: Full=ORF1 protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase
 emb|CAA79761.1| 156K-protein [Plantago asiatica mosaic virus]
          Length = 1385

 Score = 1916 bits (4964), Expect = 0.0
 Identities = 949/1166 (81%), Positives = 1013/1166 (86%)
 Frame = -1

Query: 3499 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAANQPTITAQRLETKGANHLFIFQ 3320
            LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTA   PT+TAQRLETKGANHLFIFQ
Sbjct: 195  LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPGCPTVTAQRLETKGANHLFIFQ 254

Query: 3319 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 3140
            RGNY+TPERRTF T + YVTVP IFLPE YNCRTPISKT MMQMFFYIKS KEA+     
Sbjct: 255  RGNYITPERRTFATNDQYVTVPHIFLPENYNCRTPISKTTMMQMFFYIKSGKEAQREGHL 314

Query: 3139 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 2960
             + +QLISTKELQHYQPSEITLLVNYFEFTA+LDSHTCFEDV    L  +        I 
Sbjct: 315  GQVQQLISTKELQHYQPSEITLLVNYFEFTATLDSHTCFEDV-PPKLAPKTTPAPPLGIS 373

Query: 2959 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 2780
            R+LQFFRGRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF NPFT+P PVNPEDAD 
Sbjct: 374  RILQFFRGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKNPFTQPQPVNPEDADI 433

Query: 2779 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGSTRLG 2600
               F++FS    ++   T+   LE SAE+   HT LKV  + LS  QL A+H LG +R G
Sbjct: 434  SSRFQDFSRATNSTPKPTVEAVLEASAESPDHHTQLKVLCSALSEGQLEAIHALGHSRCG 493

Query: 2599 GPLLPRIAPDEQDSEXXXXXXXXXXPTKANTTLNQGDHADQAPVNSDPATLPWVAWLPKL 2420
            GPLLP +       E           ++A+   +     D  P   +P TLPWVAWLPKL
Sbjct: 494  GPLLPELTAKSTPVEQCPDLPPCPTKSQASPASSNPSGPDAQPTAQNPETLPWVAWLPKL 553

Query: 2419 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWKEPGLSKVLTTLRSLNRFPTPW 2240
            NALGFEALE+Q DPSTGE+IMPI D ++LP+ATLP HW+   L ++L+TLRSLNRFPTPW
Sbjct: 554  NALGFEALEVQHDPSTGEMIMPITDTQELPRATLPAHWQGHNLERILSTLRSLNRFPTPW 613

Query: 2239 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 2060
             PDR RARAFTSDVKNSRTGKALHRE+QTWKETQTMLTEN    LAISVIHGAGGSGKSQ
Sbjct: 614  SPDRTRARAFTSDVKNSRTGKALHRESQTWKETQTMLTENTQTELAISVIHGAGGSGKSQ 673

Query: 2059 ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1880
            ALQTLLRQ+  LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFV S SPVVIFDDYG
Sbjct: 674  ALQTLLRQDHSLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVSSHSPVVIFDDYG 733

Query: 1879 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTELSRYYINA 1700
            KLPQGY+EAFA+THA+LELVILTGDPRQSTHHE+NEEALISKL PATTI++  SRYYINA
Sbjct: 734  KLPQGYLEAFALTHANLELVILTGDPRQSTHHESNEEALISKLPPATTIYSAFSRYYINA 793

Query: 1699 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 1520
            T RNSKFLANKLGVYS+NSCPL VTYGFQP PG+HLLVPSLMKKAAFTDAGHKVS+YAGC
Sbjct: 794  TLRNSKFLANKLGVYSANSCPLNVTYGFQPLPGLHLLVPSLMKKAAFTDAGHKVSSYAGC 853

Query: 1519 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTF 1340
            QGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVN+NAQSSAFWEKLEATPYLKTF
Sbjct: 854  QGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNTNAQSSAFWEKLEATPYLKTF 913

Query: 1339 LSLVREDKIEEFSAXXXXXXXXXXXXXXXPVEDKTTTLDDFKESLSDKFEREIFTEAHGH 1160
            LSLVREDKI EF A               PVE+  TTLDDFKE L DKF+REIFT   GH
Sbjct: 914  LSLVREDKITEFQAPADAPKPVTPPVTHFPVEEPATTLDDFKEELRDKFDREIFTSDRGH 973

Query: 1159 TNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYH 980
            TNCVQ DDPTTQLFSHQQAKDEALLWE I+ARL ISTPEAN+EEFRAKKDLGDILW NYH
Sbjct: 974  TNCVQTDDPTTQLFSHQQAKDEALLWEMIRARLKISTPEANIEEFRAKKDLGDILWVNYH 1033

Query: 979  KAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQILIFLKSQW 800
            +AM LPKEQP+FSEDLW RCAEEVQNTYLKK+++Q+KGGERRQSPDFHEHQILIFLKSQW
Sbjct: 1034 RAMGLPKEQPDFSEDLWNRCAEEVQNTYLKKTMAQLKGGERRQSPDFHEHQILIFLKSQW 1093

Query: 799  VKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 620
            VKKMEKLGAK+IKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS
Sbjct: 1094 VKKMEKLGAKEIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLS 1153

Query: 619  RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 440
            RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF
Sbjct: 1154 RWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF 1213

Query: 439  LGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFTL 260
            LGTLSIMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF L
Sbjct: 1214 LGTLSIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFAL 1273

Query: 259  LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI 80
            LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGV+DAI
Sbjct: 1274 LKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVRDAI 1333

Query: 79   SNVIANYSLDAKLAYSLGDDLQELLS 2
            +NV+ANYSLDAKLAYSLGDDLQ+LLS
Sbjct: 1334 TNVVANYSLDAKLAYSLGDDLQDLLS 1359