BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00001257
         (4016 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN21599.1| RNA-directed RNA polymerase QDE-1 [Handroanthus i...  2091   0.0  
ref|XP_011081567.1| RNA-dependent RNA polymerase 6 [Sesamum indi...  2086   0.0  
ref|XP_012857917.1| PREDICTED: RNA-dependent RNA polymerase 6 [E...  2022   0.0  
gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]  1904   0.0  
ref|XP_022845194.1| RNA-dependent RNA polymerase 6 [Olea europae...  1894   0.0  
gb|KZV21330.1| RNA-dependent RNA polymerase 6-like [Dorcoceras h...  1867   0.0  
ref|XP_019260524.1| PREDICTED: RNA-dependent RNA polymerase 6 [N...  1807   0.0  
ref|NP_001312583.1| RNA-dependent RNA polymerase 6 [Nicotiana ta...  1806   0.0  
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    1805   0.0  
ref|XP_016477231.1| PREDICTED: RNA-dependent RNA polymerase 6 [N...  1805   0.0  
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]   1805   0.0  
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]    1805   0.0  
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]  1804   0.0  
ref|XP_009758053.1| PREDICTED: RNA-dependent RNA polymerase 6 [N...  1803   0.0  
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...  1797   0.0  
ref|XP_010648660.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...  1782   0.0  
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1768   0.0  
ref|XP_015885879.1| PREDICTED: RNA-dependent RNA polymerase 6 [Z...  1764   0.0  
ref|XP_016572020.1| PREDICTED: RNA-dependent RNA polymerase 6 [C...  1763   0.0  
ref|XP_015073465.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1758   0.0  

>gb|PIN21599.1| RNA-directed RNA polymerase QDE-1 [Handroanthus impetiginosus]
          Length = 1204

 Score = 2091 bits (5417), Expect = 0.0
 Identities = 1011/1198 (84%), Positives = 1107/1198 (92%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGSEI   +++VTQISVGGLEK VTA+ML+DYFE+++G+VWRCRLKTSSTPPDSYPNYEI
Sbjct: 8    MGSEISDTDLIVTQISVGGLEKFVTAKMLLDYFEDNVGLVWRCRLKTSSTPPDSYPNYEI 67

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            DTE +QRK++Y KVEPHAFVHFAV  SA SAL+AAGRG+LIL G+PLKVSLGP+NPH LN
Sbjct: 68   DTERVQRKNEYVKVEPHAFVHFAVAGSANSALEAAGRGDLIL-GRPLKVSLGPQNPHRLN 126

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            E+RRTT PYKLSDVFVE+GVMRS +EF+VGW GPR GVDFLVDPFNG CKL FTKDTAFS
Sbjct: 127  ERRRTTTPYKLSDVFVEIGVMRSPDEFIVGWSGPRRGVDFLVDPFNGTCKLHFTKDTAFS 186

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            FKGE + AVI CNF IEFLPREI EIKHY+DF SL+V++QLASSPL+YYRTADDDI+ESV
Sbjct: 187  FKGEARPAVINCNFMIEFLPREINEIKHYKDFTSLVVIVQLASSPLVYYRTADDDIEESV 246

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
            PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPR G +L+KAL YLR RRV V+   P
Sbjct: 247  PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRNGSHLSKALGYLRNRRVTVLDGCP 306

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
            R +L V+DEPDFGMPM DPFFCIQYKEGISFK++FLVNAVMHKGIINQHQMSEKFFDLLR
Sbjct: 307  RQQLQVRDEPDFGMPMSDPFFCIQYKEGISFKIMFLVNAVMHKGIINQHQMSEKFFDLLR 366

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
            S+PEE+ TVALK M S+KHP+ DAFKAL+ +Q+WLLNNPK+LERPREM+DIVEVRRLIIT
Sbjct: 367  SQPEELTTVALKRMYSFKHPVDDAFKALKNLQQWLLNNPKILERPREMDDIVEVRRLIIT 426

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAM TLNKNVLTY+V P+ R ITSN
Sbjct: 427  PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMQTLNKNVLTYFVTPIVRDITSN 486

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            S PQRTTMFKRVKDIL NGFYLCGRKYSFLAFS+NQLRDRSAWFFAEDKN GVA IK+WM
Sbjct: 487  SGPQRTTMFKRVKDILTNGFYLCGRKYSFLAFSANQLRDRSAWFFAEDKNIGVATIKSWM 546

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            GKFTNRN+AKCAARMGQCFSSTYATVEVPST+VNSKLPDIERN YVFSDGIGM+S  LA+
Sbjct: 547  GKFTNRNVAKCAARMGQCFSSTYATVEVPSTEVNSKLPDIERNDYVFSDGIGMISADLAM 606

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSW 1782
            EVAEKLQ+ST PPCAYQIRYAGYKGV+A WP   DG  L+LR SM+KFESNHTILEICSW
Sbjct: 607  EVAEKLQLSTKPPCAYQIRYAGYKGVVAGWPAKNDGFRLYLRPSMKKFESNHTILEICSW 666

Query: 1781 TRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGS 1602
            TRFQPGFLNRQI+TLLSAL+V+D IFWRMQETMVSRLD+MLEDTDMAFDV+T SCTDQG+
Sbjct: 667  TRFQPGFLNRQIITLLSALDVQDDIFWRMQETMVSRLDQMLEDTDMAFDVLTASCTDQGN 726

Query: 1601 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHG 1422
            TAAIMLSAGFKPQTEPHLRGMLTSIRAAQL DLREKARIFVP+GRWLMGCLDELGVLE G
Sbjct: 727  TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLADLREKARIFVPNGRWLMGCLDELGVLESG 786

Query: 1421 QCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPEL 1242
            QCFIQVS PSLE+ FVKHGS FSE+EK+LQV+KGLVAIAKNPCLHPGDVRILEAVD P L
Sbjct: 787  QCFIQVSNPSLEDCFVKHGSHFSESEKRLQVIKGLVAIAKNPCLHPGDVRILEAVDVPGL 846

Query: 1241 HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEAREL 1062
            HHL+DCL+FPQKG+RPHTNEASGSDLDGDLYFVTWDENL+PPSKRSW PM+YA GE ++L
Sbjct: 847  HHLYDCLIFPQKGERPHTNEASGSDLDGDLYFVTWDENLLPPSKRSWTPMEYAPGEIKQL 906

Query: 1061 PRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPK 882
            PR+V+HSDIIEFF KNMVNESLG ICNAHVVHADLS+YGALDEKCIKLAELAA AVDFPK
Sbjct: 907  PREVKHSDIIEFFAKNMVNESLGAICNAHVVHADLSEYGALDEKCIKLAELAATAVDFPK 966

Query: 881  TGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFALE 702
            TGKIV+MP +LKPK+YPDFMGKEE QTY+S+KILGKLYRK++DA D+ YE SS+  FA E
Sbjct: 967  TGKIVSMPADLKPKMYPDFMGKEEFQTYNSSKILGKLYRKVRDAYDKDYEASSQHAFAWE 1026

Query: 701  NITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSK 522
            + TYD DLEI GS SFI DAW+CKCSYDGQLIGLLGQYKVNREEE+VTGHIWSMPKY SK
Sbjct: 1027 SSTYDGDLEIPGSTSFITDAWDCKCSYDGQLIGLLGQYKVNREEEVVTGHIWSMPKYKSK 1086

Query: 521  KQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWL 342
            KQGELKERLKHAYSTLRK+FRKVFE MDPEFDQLSDDEKNI+YE+KASAWY VTYHES++
Sbjct: 1087 KQGELKERLKHAYSTLRKDFRKVFECMDPEFDQLSDDEKNILYERKASAWYHVTYHESYV 1146

Query: 341  KKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
            KKSKELQ++DD+GKTVMLSFAWIAADYLARIKIR RR ENDISTKPIDSLGRYLADKI
Sbjct: 1147 KKSKELQLLDDSGKTVMLSFAWIAADYLARIKIRHRRMENDISTKPIDSLGRYLADKI 1204


>ref|XP_011081567.1| RNA-dependent RNA polymerase 6 [Sesamum indicum]
 ref|XP_020550370.1| RNA-dependent RNA polymerase 6 [Sesamum indicum]
          Length = 1205

 Score = 2086 bits (5404), Expect = 0.0
 Identities = 1010/1201 (84%), Positives = 1096/1201 (91%), Gaps = 3/1201 (0%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGSEI   ++VVTQISVGGLE  VTA+ML+DYFE++IG+VWRCRLKTSSTPP+S PNYEI
Sbjct: 5    MGSEIGDNDLVVTQISVGGLENYVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESNPNYEI 64

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            D E +QRK DY K+EPHAFVHFAV HSA +ALDAA RGELIL  KPLKVSLGP+NP+ +N
Sbjct: 65   DAESVQRKTDYVKIEPHAFVHFAVAHSAKAALDAAARGELILGRKPLKVSLGPQNPYRMN 124

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            E+RRTT PYKLSDV +E+GVMRSR+EF+VGWRGPRTGVDFLVDPFNG CKL FT++TAFS
Sbjct: 125  ERRRTTTPYKLSDVLIEIGVMRSRDEFLVGWRGPRTGVDFLVDPFNGTCKLHFTRNTAFS 184

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            FKGE +SAVIKCNF+IEFLPREI EI  YRDF SLIVLLQLASSPL+YYRTADDDI+ESV
Sbjct: 185  FKGEARSAVIKCNFKIEFLPREINEINQYRDFSSLIVLLQLASSPLVYYRTADDDIEESV 244

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
            PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRIS RPR GP L KALEYLRK RVPV+ ESP
Sbjct: 245  PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISARPRNGPSLFKALEYLRKLRVPVLDESP 304

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
               L VQDEPDFGMPM DPFFC+QYKEGISFK++FLVNAVMHKGIINQHQMSEKFFDLLR
Sbjct: 305  GRTLRVQDEPDFGMPMSDPFFCLQYKEGISFKIMFLVNAVMHKGIINQHQMSEKFFDLLR 364

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
            S+PEE+N VALKHMCSYK P+YDA KAL+ VQKWLLNNPKLLERPREM+D+VEVRRLIIT
Sbjct: 365  SQPEELNIVALKHMCSYKRPVYDAIKALDFVQKWLLNNPKLLERPREMDDVVEVRRLIIT 424

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            P+KAYCLPPEVELSNRVLRNY+NIADRFLRVTFMDEAM TLNKNVL YY  P+ R ITSN
Sbjct: 425  PSKAYCLPPEVELSNRVLRNYKNIADRFLRVTFMDEAMQTLNKNVLMYYASPIVRDITSN 484

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            SNPQRT MFKRVKDIL NGFYLCGRKY+FLAFS+NQLRDRSAWFFAEDKNTGVANIK+WM
Sbjct: 485  SNPQRTNMFKRVKDILVNGFYLCGRKYTFLAFSANQLRDRSAWFFAEDKNTGVANIKSWM 544

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            GKFT RN+AKCAARMGQCFSSTYAT+EVP T+VNS+ PD+ERNGYVFSDGIGM+S  LA+
Sbjct: 545  GKFTQRNVAKCAARMGQCFSSTYATIEVPLTKVNSQFPDVERNGYVFSDGIGMISADLAI 604

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSW 1782
            EVAEKLQ+ ++PPCAYQIRYAGYKGV+ARWP   DG  L+LR SM+KFESNH  LEICSW
Sbjct: 605  EVAEKLQLGSNPPCAYQIRYAGYKGVVARWPAKDDGVRLYLRRSMKKFESNHKTLEICSW 664

Query: 1781 TRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGS 1602
            TRFQPGFLNRQIVTLLSALEV+D IFWRMQETMVSRLD MLED+D AFDV+T SCTDQG+
Sbjct: 665  TRFQPGFLNRQIVTLLSALEVQDDIFWRMQETMVSRLDWMLEDSDTAFDVLTASCTDQGN 724

Query: 1601 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREK---ARIFVPSGRWLMGCLDELGVL 1431
            TAA+MLSAGF+PQTEPHLRGMLTSIRAAQLGDL E+   ARIFVP GRWLMGCLDELG L
Sbjct: 725  TAALMLSAGFRPQTEPHLRGMLTSIRAAQLGDLSERATIARIFVPLGRWLMGCLDELGKL 784

Query: 1430 EHGQCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDA 1251
            EHGQCFIQVS PS+E+ FVKHGS+FSE +KKLQVV GLVAIAKNPCLHPGDVRILEAVD 
Sbjct: 785  EHGQCFIQVSNPSIEDCFVKHGSQFSETKKKLQVVTGLVAIAKNPCLHPGDVRILEAVDV 844

Query: 1250 PELHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEA 1071
            PELHHL+DCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSW PM+YA GE 
Sbjct: 845  PELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWTPMEYAPGEV 904

Query: 1070 RELPRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVD 891
            ++LPR+V+HSDII+FFTKNMVNESLG ICNAHVVHADLS+YGALDEKCIKLAELAA AVD
Sbjct: 905  KQLPREVKHSDIIDFFTKNMVNESLGAICNAHVVHADLSEYGALDEKCIKLAELAATAVD 964

Query: 890  FPKTGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTF 711
            FPKTGKIV MP ELKPK YPDFMGKEE Q+Y+S+KILGKLYRKIKDA DR +E S E TF
Sbjct: 965  FPKTGKIVNMPAELKPKTYPDFMGKEEFQSYNSSKILGKLYRKIKDAYDRDHEASREHTF 1024

Query: 710  ALENITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKY 531
            A ++I YDQDLE+TGS  FI DAWNCKCSYDGQLIGLLGQYKVNREEE+VTGHIWSMPKY
Sbjct: 1025 ASDDIIYDQDLEVTGSTGFIGDAWNCKCSYDGQLIGLLGQYKVNREEEVVTGHIWSMPKY 1084

Query: 530  SSKKQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHE 351
            SSKKQGELKERLKHAYSTLRKEFRKVFE M PEFDQL DDEKNIMYE+KASAWYQVTY +
Sbjct: 1085 SSKKQGELKERLKHAYSTLRKEFRKVFECMGPEFDQLWDDEKNIMYERKASAWYQVTYKD 1144

Query: 350  SWLKKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADK 171
            SW+KKSKEL  VDDAGK+VMLSFAWIAADYLARIKI+RR  EN ISTKPIDSLGRYLADK
Sbjct: 1145 SWVKKSKELHAVDDAGKSVMLSFAWIAADYLARIKIKRRMMENSISTKPIDSLGRYLADK 1204

Query: 170  I 168
            I
Sbjct: 1205 I 1205


>ref|XP_012857917.1| PREDICTED: RNA-dependent RNA polymerase 6 [Erythranthe guttata]
 gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Erythranthe guttata]
          Length = 1196

 Score = 2022 bits (5239), Expect = 0.0
 Identities = 981/1199 (81%), Positives = 1083/1199 (90%), Gaps = 1/1199 (0%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGSEI  + M+VTQISVGGL  NVTA+ML+DYFE++IG+VWRCRLKTSSTPP+SYPNYEI
Sbjct: 1    MGSEISDREMIVTQISVGGLGSNVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEI 60

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            D +  ++ DDY K++P+AFVHF V  SA  A++AA RG+L   GK LKVSLGP+NP+ L+
Sbjct: 61   DIDSAKQSDDYVKIQPYAFVHFVVAESANKAVEAASRGDLRFAGKLLKVSLGPQNPYRLS 120

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            E+RRTT PYKLSD FVE+G +RSREE VVGWRGPR+GVDFLVDPF+G CKL   +DTAF 
Sbjct: 121  ERRRTTTPYKLSDAFVEIGSLRSREELVVGWRGPRSGVDFLVDPFSGTCKLHIKRDTAFC 180

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            FKGE +SA+IKC+FRIEF PREIIEIKHYRDF SLI+L+QLASSPLIYYRTADDDI+E  
Sbjct: 181  FKGEARSAIIKCDFRIEFFPREIIEIKHYRDFSSLIILIQLASSPLIYYRTADDDIEEPA 240

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
              DLLDDDDPWIRTTDFT  GA GRCNTYRISVRP  GP+L KAL+YLRKRRVPV+ E  
Sbjct: 241  TCDLLDDDDPWIRTTDFTSGGAFGRCNTYRISVRPHNGPHLLKALDYLRKRRVPVLDERT 300

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
            R RL+VQDEPDFGMP+LDPF CIQYKEGISFKV+FL+NAVMHKGIINQHQ+SE+  D+ R
Sbjct: 301  RQRLVVQDEPDFGMPVLDPFLCIQYKEGISFKVMFLLNAVMHKGIINQHQISEQLLDMFR 360

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
             +PE+VNTVALKHMCSYK P+YDAFKA+E VQ+WLL NPKLLERPR M+DIVEVRRLIIT
Sbjct: 361  RQPEDVNTVALKHMCSYKRPVYDAFKAVETVQRWLLKNPKLLERPRGMDDIVEVRRLIIT 420

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            PAKAYCLPPEVELSNRVLR+Y+ +ADRFLRVTF DEAM TLNKN LTYYVGPM RGITS+
Sbjct: 421  PAKAYCLPPEVELSNRVLRHYKAVADRFLRVTFTDEAMSTLNKNALTYYVGPMVRGITSS 480

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            SNPQRTT+FKR+KDIL++GFYLCGRKYSFLAFSSNQLRDRSAWFFAEDK+ GVANIKNWM
Sbjct: 481  SNPQRTTIFKRIKDILHSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKDIGVANIKNWM 540

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            G+FTNRN+AKCAARMGQCFSSTYATVEVPS QVNSKLPDIERN YVFSDGIGM+S  LA+
Sbjct: 541  GRFTNRNVAKCAARMGQCFSSTYATVEVPSKQVNSKLPDIERNDYVFSDGIGMLSADLAM 600

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSW 1782
            EVAEKLQ++T+ P AYQIRYAGYKGV+A WP   DG  L LR SM+KF+SNHT+LEICSW
Sbjct: 601  EVAEKLQLTTNLPSAYQIRYAGYKGVVACWPAQSDGFRLSLRKSMKKFDSNHTVLEICSW 660

Query: 1781 TRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGS 1602
            TRFQPGFLNRQI+TLLSALEV D IFWRMQETM+SRL++MLEDTD AFDV+T SCTDQG+
Sbjct: 661  TRFQPGFLNRQIITLLSALEVGDEIFWRMQETMISRLNQMLEDTDTAFDVLTSSCTDQGN 720

Query: 1601 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHG 1422
            TAAIMLSAGFKPQTEPHLRGMLTSIR AQLGDLRE+ARIFVPSGRWLMGCLDELGVLEHG
Sbjct: 721  TAAIMLSAGFKPQTEPHLRGMLTSIRVAQLGDLRERARIFVPSGRWLMGCLDELGVLEHG 780

Query: 1421 QCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPEL 1242
            QCFIQVS PSLE+ FVKHGS FS  +KKL+V+KGLVAIAKNPCLHPGDVRILEAVD P L
Sbjct: 781  QCFIQVSNPSLEDCFVKHGSEFSGAKKKLEVIKGLVAIAKNPCLHPGDVRILEAVDCPGL 840

Query: 1241 HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEAREL 1062
            HHL+DCLVFPQKG+RPHTNEASGSDLDGDLYFVTWDENL+PPSKRSW PM+YA GE ++L
Sbjct: 841  HHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLMPPSKRSWTPMEYAPGEVKQL 900

Query: 1061 PRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPK 882
            PR+V+H+DIIEFFTKNMVNESLG ICNAHVVHAD S+YGALDEKCIKLAELAAIAVDFPK
Sbjct: 901  PREVKHTDIIEFFTKNMVNESLGAICNAHVVHADSSEYGALDEKCIKLAELAAIAVDFPK 960

Query: 881  TGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFALE 702
            TGKIVTMP ELKPKLYPDFMGK+E QTY S+KILGKLYRKIKD+N   YEESSE T    
Sbjct: 961  TGKIVTMPAELKPKLYPDFMGKDEFQTYKSSKILGKLYRKIKDSN-YDYEESSENTSV-- 1017

Query: 701  NITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSK 522
            NI YDQ+LEI GS+SFI DAWNCKCSYDGQL GLLGQYKVN EEE+VTGHIWSMPKYSSK
Sbjct: 1018 NIAYDQELEIAGSESFITDAWNCKCSYDGQLTGLLGQYKVNSEEEVVTGHIWSMPKYSSK 1077

Query: 521  KQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWL 342
            KQGELKERLKHAYSTLRK+FRKVFESMD EFDQLSDDEKN M+E+KASAWYQVTY+ESW+
Sbjct: 1078 KQGELKERLKHAYSTLRKDFRKVFESMDAEFDQLSDDEKNTMFERKASAWYQVTYNESWV 1137

Query: 341  KKSKELQMVDD-AGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
            KKSK+LQ+VDD  GKTVMLSFAWIAADYLARIKIRRRR EN IS KPIDSLGRYLADKI
Sbjct: 1138 KKSKDLQVVDDEVGKTVMLSFAWIAADYLARIKIRRRRMENAISMKPIDSLGRYLADKI 1196


>gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
          Length = 1195

 Score = 1904 bits (4933), Expect = 0.0
 Identities = 915/1195 (76%), Positives = 1048/1195 (87%)
 Frame = -1

Query: 3752 EIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEIDTE 3573
            ++   +M+VTQIS+GGLE  VTA++L DY E+++G+VWRCR+KTSSTP DSYPNYEIDTE
Sbjct: 3    QVGDNDMIVTQISIGGLEGYVTAKLLSDYLEDNVGLVWRCRVKTSSTPQDSYPNYEIDTE 62

Query: 3572 GIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLNEKR 3393
             +QRK +YEKVEPHAFVHFAV  S+ SA+  +G G+L+L    LKV LGP+NP+ L E+R
Sbjct: 63   NVQRKGEYEKVEPHAFVHFAVAQSSASAMKLSGAGDLVLGRHILKVGLGPQNPYRLRERR 122

Query: 3392 RTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFSFKG 3213
            RTT PYK+  V VE+G M+SR+EFVVGWRGPRTG+DFLVDPFNG C++ FTKDTAFS KG
Sbjct: 123  RTTTPYKVPGVTVEIGAMKSRDEFVVGWRGPRTGLDFLVDPFNGTCQILFTKDTAFSIKG 182

Query: 3212 EVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESVPFD 3033
            E + AVIKCNF++EF+PREI +IK Y+DF S++VL QLASSPL+YYRTADDDI+ESVPFD
Sbjct: 183  EARPAVIKCNFKMEFVPREINQIKRYKDFSSVVVLFQLASSPLLYYRTADDDIEESVPFD 242

Query: 3032 LLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESPRHR 2853
            LLDDDDPWIRTTDF PSGAIGR NTYRISVRPR+   L KAL YL+ RRVPV   SP+ R
Sbjct: 243  LLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRHLSQLEKALGYLQNRRVPVENGSPQER 302

Query: 2852 LLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLRSRP 2673
            L VQDEPDFG+PM DPFFC QYKEG++FKV+F+VNAV+HKGIINQHQ S++FFDLLRS+P
Sbjct: 303  LRVQDEPDFGVPMADPFFCFQYKEGLNFKVMFMVNAVVHKGIINQHQTSKQFFDLLRSQP 362

Query: 2672 EEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIITPAK 2493
            EE+N VALKH+ SYK P+YDA++AL+ V KWL+ NPKLL+RP +M+DIVEVRRL+ITP+K
Sbjct: 363  EELNLVALKHIYSYKRPVYDAYRALDSVTKWLIKNPKLLQRPDQMDDIVEVRRLVITPSK 422

Query: 2492 AYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSNSNP 2313
            AYCLPPEVELSNRVLRNY+NI+DRFLRVTFMDEAM TLNKNVLTYY  P+ R ITSN NP
Sbjct: 423  AYCLPPEVELSNRVLRNYKNISDRFLRVTFMDEAMQTLNKNVLTYYAAPIVREITSNLNP 482

Query: 2312 QRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWMGKF 2133
            QRTTMFKRV+DIL  GFYLCGR+YSFLAFSSNQLRDRSAWFFAED+ T V  IK WMGKF
Sbjct: 483  QRTTMFKRVRDILYQGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRKTSVVCIKTWMGKF 542

Query: 2132 TNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAVEVA 1953
            TNRN+AKCAARMGQCFSSTYATVEVPS Q NSK  D+ERNGY+FSDGIGM+S  LA EVA
Sbjct: 543  TNRNVAKCAARMGQCFSSTYATVEVPSAQANSK-SDVERNGYIFSDGIGMISADLAKEVA 601

Query: 1952 EKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSWTRF 1773
            EKLQ+ T  PCAYQIRYAGYKGV+A WP   +G  L LR SM+KF+S+HT LEICSWTRF
Sbjct: 602  EKLQLRTKLPCAYQIRYAGYKGVVACWPAENNGHRLQLRPSMKKFDSDHTTLEICSWTRF 661

Query: 1772 QPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGSTAA 1593
            QPGFLNRQIVTLLS+LEV D  FWRMQE M++RLD +LED DMAFDV+T SC+DQG+TAA
Sbjct: 662  QPGFLNRQIVTLLSSLEVCDENFWRMQELMIARLDGILEDPDMAFDVLTASCSDQGNTAA 721

Query: 1592 IMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHGQCF 1413
            +ML+AGF+  TEPHLRGML SIR +QLGDLREK+RIFV SGRWLMGCLDELGVLE+GQCF
Sbjct: 722  MMLAAGFRSHTEPHLRGMLMSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCF 781

Query: 1412 IQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPELHHL 1233
            IQVS PSLE+ F  HGS FSE +K L+V+KGLV IAKNPCLHPGDVRILEAVD   LHHL
Sbjct: 782  IQVSKPSLEDCFANHGSEFSETKKDLEVIKGLVVIAKNPCLHPGDVRILEAVDVRGLHHL 841

Query: 1232 HDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEARELPRD 1053
            +DCLVFPQKG+RPH NEASGSDLDGDLYFVTWD+ LIPPSKRSW+PMDY  GE +  PR+
Sbjct: 842  YDCLVFPQKGERPHANEASGSDLDGDLYFVTWDDTLIPPSKRSWLPMDYEPGEVKLKPRE 901

Query: 1052 VRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPKTGK 873
            V HSDIIEFFTKNMVNESLGTICNAHVVHADLS+YGALDEKCIKLAELAAIAVDFPKTGK
Sbjct: 902  VTHSDIIEFFTKNMVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGK 961

Query: 872  IVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFALENIT 693
            IVTMPP+LKP++YPDFMGKEELQ+Y S KILGKLYR+++DA +  YE SS+ T+  + I+
Sbjct: 962  IVTMPPDLKPQMYPDFMGKEELQSYKSTKILGKLYRRVRDAYNLDYEASSQLTYPAD-IS 1020

Query: 692  YDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQG 513
            YDQ+LE+TGSK FIADAW+CKCSYDGQL GLLGQYKVN E+E+VTGHIWSMPK+SSKKQG
Sbjct: 1021 YDQELEVTGSKDFIADAWSCKCSYDGQLAGLLGQYKVNSEDEVVTGHIWSMPKFSSKKQG 1080

Query: 512  ELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKS 333
            ELKERLKHAY+ LRK++RKVFE M P FDQL D EKN++YE+KASAWYQVTY ++W+KKS
Sbjct: 1081 ELKERLKHAYNALRKDYRKVFECMAPGFDQLPDHEKNVLYEQKASAWYQVTYQDNWVKKS 1140

Query: 332  KELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
            KELQ +DD+GKTV+LSFAWIAADYLARIKIRRRR EN IS KPIDSLGRYLADKI
Sbjct: 1141 KELQELDDSGKTVLLSFAWIAADYLARIKIRRRRMENAISGKPIDSLGRYLADKI 1195


>ref|XP_022845194.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
 ref|XP_022845195.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
 ref|XP_022845196.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
 ref|XP_022845198.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
          Length = 1195

 Score = 1894 bits (4907), Expect = 0.0
 Identities = 924/1200 (77%), Positives = 1045/1200 (87%), Gaps = 2/1200 (0%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            M S+   K+MV+TQI VGG E  VTA+MLMDYFE++IG+VWRCRLKTSSTPP+SYP+YE+
Sbjct: 1    MASKGGEKDMVITQIGVGGFEDFVTAKMLMDYFEDNIGLVWRCRLKTSSTPPESYPSYEV 60

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            DTE +QRK DYEKV+PHAFVHFA+  SA SALDAAGR ELIL    LKVSLGPENPH +N
Sbjct: 61   DTESVQRKHDYEKVKPHAFVHFALSSSAMSALDAAGRNELILGKNLLKVSLGPENPHRMN 120

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            E+RRT  P KLS+V VE+G+MR +++F+VGWRGPR GVDFLVDPFN  CKL FTK+T FS
Sbjct: 121  ERRRTIPPIKLSNVCVEIGLMRGQDDFLVGWRGPRDGVDFLVDPFNATCKLLFTKETVFS 180

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            FKGE K+ VIKCNF++EFLPREI EIK YRDF SLI+LLQLASSP++YYRTADDDI+ESV
Sbjct: 181  FKGESKNTVIKCNFKVEFLPREINEIKRYRDFSSLIILLQLASSPIVYYRTADDDIEESV 240

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
            PFDLLDDDDPWIRTTDFTPSGAIGRCN YRISVRPR GP   KAL YL++ R+PV+ +SP
Sbjct: 241  PFDLLDDDDPWIRTTDFTPSGAIGRCNIYRISVRPRNGPRFDKALAYLQEHRIPVLNDSP 300

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
              R  V+DEPDFG+P+ DPFFCIQYKEGI+FKVLFLVNA+MHKGIINQHQMS+KFF LLR
Sbjct: 301  EPR--VRDEPDFGVPLPDPFFCIQYKEGITFKVLFLVNAIMHKGIINQHQMSDKFFHLLR 358

Query: 2681 SRPEEVNTVALKHMCSYKH-PMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLII 2505
             RPE VN VALKH+ S KH   YDA K L  VQKWLL NPKLLE P+E++DIVEVRRLII
Sbjct: 359  IRPERVNLVALKHIWSLKHHTWYDACKNLVFVQKWLLKNPKLLEGPQELDDIVEVRRLII 418

Query: 2504 TPAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITS 2325
            TPAKAYCLPPEVELSNRVLRNY+N+ADRFLRVTFMDE M  LNKNVLTYY   + R ITS
Sbjct: 419  TPAKAYCLPPEVELSNRVLRNYKNVADRFLRVTFMDEGMRKLNKNVLTYYPSGILRDITS 478

Query: 2324 NSNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNW 2145
            +SNPQRT+MFKRVKDIL+NGFYLCGR+YSFLA+S+NQLRD SAWFFAE++   V +I +W
Sbjct: 479  DSNPQRTSMFKRVKDILSNGFYLCGRRYSFLAYSANQLRDSSAWFFAENETVVVPSIMSW 538

Query: 2144 MGKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLA 1965
            MG+FTNRN+AKCAARMGQCFSSTYATVEVP+ +V+ +LPDI+RNGY FSDGIG +S  LA
Sbjct: 539  MGRFTNRNVAKCAARMGQCFSSTYATVEVPAAEVDPELPDIQRNGYDFSDGIGKISPDLA 598

Query: 1964 VEVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICS 1785
            + VAEKLQ++ +PPCAYQIRYAG KGV+A WP   +G HL+LR SM+KFESNHTILEICS
Sbjct: 599  MRVAEKLQLTVNPPCAYQIRYAGCKGVVACWPAENNGIHLYLRPSMKKFESNHTILEICS 658

Query: 1784 WTRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQG 1605
            WTRFQPGFLNRQI+TLLSAL+V+D IFW+MQE MVSRLDRML DTD AFD++T SC +QG
Sbjct: 659  WTRFQPGFLNRQIITLLSALDVKDDIFWKMQEIMVSRLDRMLVDTDTAFDILTASCAEQG 718

Query: 1604 STAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEH 1425
            +TAAIMLSAGF+PQ+EPHL GMLTSIRAAQLGDLRE+ARIFVPSGRWLMGCLDELG+L  
Sbjct: 719  NTAAIMLSAGFRPQSEPHLCGMLTSIRAAQLGDLRERARIFVPSGRWLMGCLDELGILRQ 778

Query: 1424 GQCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPE 1245
            GQCFIQVS PSLE+ FVKHGS+FSE  K L+V+KGLVAIAKNPCLHPGDVRILEAVD P 
Sbjct: 779  GQCFIQVSNPSLEDCFVKHGSKFSETNKNLRVIKGLVAIAKNPCLHPGDVRILEAVDIPG 838

Query: 1244 LHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEARE 1065
            L HL+DCLVFPQ GDRPHTNEASGSDLDGDLYFVTWDENLIPPSK+SWIPM+Y+ GE + 
Sbjct: 839  LKHLYDCLVFPQNGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMEYSTGEVKT 898

Query: 1064 LPRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFP 885
            LPRDV+H DII+FF+KNMVNESLG ICNAHVVHADLS+ GALD KCI+LAELAA AVDFP
Sbjct: 899  LPRDVKHKDIIDFFSKNMVNESLGAICNAHVVHADLSESGALDLKCIRLAELAATAVDFP 958

Query: 884  KTGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFAL 705
            KTGKIVTMP  LKPKLYPDFMGKEE Q+Y S+KILGKLYRKIKDA D  YE SS   FA 
Sbjct: 959  KTGKIVTMPTVLKPKLYPDFMGKEEFQSYRSSKILGKLYRKIKDAYDEDYEGSSGLAFAS 1018

Query: 704  ENITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSS 525
            + I YDQDLEI GS+SF ADAWNCKC+YDGQL  LLGQYKVNREEE+VTGHIWSMPKYSS
Sbjct: 1019 KEIPYDQDLEIPGSESFFADAWNCKCAYDGQLSCLLGQYKVNREEEVVTGHIWSMPKYSS 1078

Query: 524  KKQGELKERLKHAYSTLRKEFRKVFESM-DPEFDQLSDDEKNIMYEKKASAWYQVTYHES 348
            KKQGELKERLKHAY++L+K+FRK+F+SM D +F+ LSDDEKN++YE+KASAWYQVTYH  
Sbjct: 1079 KKQGELKERLKHAYNSLKKDFRKIFDSMNDSDFNDLSDDEKNVIYERKASAWYQVTYHPK 1138

Query: 347  WLKKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
            W++K    Q+ D  GKTVMLSFAWIAADYLARIK R R  +N  S KPID LGRYLADKI
Sbjct: 1139 WVQK---FQVPDGVGKTVMLSFAWIAADYLARIKFRCRGIKNVESNKPIDYLGRYLADKI 1195


>gb|KZV21330.1| RNA-dependent RNA polymerase 6-like [Dorcoceras hygrometricum]
          Length = 1175

 Score = 1867 bits (4837), Expect = 0.0
 Identities = 922/1195 (77%), Positives = 1032/1195 (86%), Gaps = 4/1195 (0%)
 Frame = -1

Query: 3740 KNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEIDTEGIQR 3561
            K M+VTQISVGGLE  VTA+MLMDYFE++IG+                            
Sbjct: 8    KEMIVTQISVGGLEHYVTAKMLMDYFEDNIGL---------------------------S 40

Query: 3560 KDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLNEKRRTTI 3381
            + DY KVEPHAFVHFAV HSA +ALDAA RG+LIL  K LKVSLG ENPH LNE+RRTTI
Sbjct: 41   RGDYVKVEPHAFVHFAVPHSAKAALDAADRGKLILGSKVLKVSLGAENPHRLNERRRTTI 100

Query: 3380 PYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFSFKGEVKS 3201
            P+KLSDV +E+GV+RSR+EF+VGW GP T VDFLVDPF+G CKL FT+ TAF+FKGE + 
Sbjct: 101  PFKLSDVKLEIGVLRSRDEFIVGWMGPSTDVDFLVDPFSGTCKLLFTRHTAFTFKGEARH 160

Query: 3200 AVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESVPFDLLDD 3021
            +V+KCNF+IEFLPREI EI+ +RDF SLI+LLQL S+P I+YRTADDDI+ESVPFDLLDD
Sbjct: 161  SVVKCNFKIEFLPREINEIRQFRDFSSLIILLQLTSAPKIFYRTADDDIEESVPFDLLDD 220

Query: 3020 DDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESPRHRLLVQ 2841
            DDPWIRTTDFTPSGAIGRCN YRISVRPR GP L+KAL+YLRK R+PV+ ESPR  L V 
Sbjct: 221  DDPWIRTTDFTPSGAIGRCNIYRISVRPRNGPSLSKALDYLRKHRIPVLEESPRRHLRVW 280

Query: 2840 DEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLRSRPEEVN 2661
            DEPDFG+PM DPFF + +KEG+SFKVLFLVNAVMH+ IINQHQMS+KFFDLLRS+PE++N
Sbjct: 281  DEPDFGVPMEDPFFSVHFKEGLSFKVLFLVNAVMHRFIINQHQMSQKFFDLLRSQPEDLN 340

Query: 2660 TVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIITPAKAYCL 2481
             ++LKHMCSY+ P+ DA K LELV KWLL NPKLLERP+EM+DIVEVRRLIITP+ AYCL
Sbjct: 341  LISLKHMCSYRRPIDDASKGLELVHKWLLKNPKLLERPQEMDDIVEVRRLIITPSTAYCL 400

Query: 2480 PPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSNSNPQRTT 2301
            PPEVELSNRVLRNYRNI+DRFLRV+FMDEAM TLNKNVL+YY   +   ITS  + QRT+
Sbjct: 401  PPEVELSNRVLRNYRNISDRFLRVSFMDEAMQTLNKNVLSYYAASIVWDITSKVSQQRTS 460

Query: 2300 MFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGV--ANIKNWMGKFTN 2127
            MFKRVKDIL  GFYLCGRKYSFLAFS+NQLRDRSAWFFAED +TGV   NIKNWMG+FTN
Sbjct: 461  MFKRVKDILTKGFYLCGRKYSFLAFSANQLRDRSAWFFAEDNHTGVRVTNIKNWMGRFTN 520

Query: 2126 RNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAVEVAEK 1947
            RN+AKCAARMGQCFSSTYATVEVP ++V+S+LPDI+RNGY FSDGIGM+S  LA+ VAEK
Sbjct: 521  RNVAKCAARMGQCFSSTYATVEVPPSKVDSRLPDIKRNGYEFSDGIGMISDDLAMVVAEK 580

Query: 1946 LQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSWTRFQP 1767
            LQ++  PPCAYQIRYAG+KGV+A WP   DG  L+LR SM+KFES HT+LEICSWTRFQP
Sbjct: 581  LQLTVYPPCAYQIRYAGFKGVVACWPAKPDGKSLYLRPSMKKFESTHTMLEICSWTRFQP 640

Query: 1766 GFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGSTAAIM 1587
            GFLNRQIVTLLSALEV+D IFW MQETMVSRLD+MLEDTDMAFDVVT SC DQG+T+AIM
Sbjct: 641  GFLNRQIVTLLSALEVKDDIFWNMQETMVSRLDQMLEDTDMAFDVVTSSCADQGNTSAIM 700

Query: 1586 LSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHGQCFIQ 1407
            L+AGFKPQTEPHLRGMLTSIRAAQ+GDLREKARIFV SGRWLMGCLDELGV+E GQCFIQ
Sbjct: 701  LAAGFKPQTEPHLRGMLTSIRAAQMGDLREKARIFVSSGRWLMGCLDELGVVEQGQCFIQ 760

Query: 1406 VSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPELHHLHD 1227
            VS  SLE+ FVKHG +FSE++KKL+V+ GLVAIAKNPCLHPGDVRILEA+D PELHHL+D
Sbjct: 761  VSNTSLEDCFVKHGVQFSESKKKLEVITGLVAIAKNPCLHPGDVRILEAIDVPELHHLYD 820

Query: 1226 CLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEARELPRDVR 1047
            CLVFPQ GDRPHTNEASGSDLDGDLYFVTWDENLIPPSK S   M+YA GEA+ELPRDV 
Sbjct: 821  CLVFPQLGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKSSSPAMEYAPGEAKELPRDVT 880

Query: 1046 HSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIV 867
            H DII+FFT+NMVNESLG ICNAHVVHAD+ + GALD+KC +LAELAA AVDFPKTG IV
Sbjct: 881  HLDIIDFFTRNMVNESLGAICNAHVVHADICELGALDKKCTRLAELAATAVDFPKTGIIV 940

Query: 866  TMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFAL-ENITY 690
            TMP ELKPK+YPDFMGKE  Q+Y S KILGKLYR+IKD  D+    SSEQ+ A   NI Y
Sbjct: 941  TMPAELKPKMYPDFMGKEPFQSYDSRKILGKLYRRIKDVYDKDSMASSEQSSAWGNNIPY 1000

Query: 689  DQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGE 510
            DQDLEI GS+SFI+DAWN KC YD QL+ LLGQYKVNREEE+VTGHIWSMPKYS KKQGE
Sbjct: 1001 DQDLEIQGSESFISDAWNSKCLYDSQLVNLLGQYKVNREEEVVTGHIWSMPKYSGKKQGE 1060

Query: 509  LKERLKHAYSTLRKEFRKVFESM-DPEFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKS 333
            LKERLKHAYSTLRKEFRKVFE+M DP FDQLSDD+KN MYEKKASAWYQVTYHE W+KKS
Sbjct: 1061 LKERLKHAYSTLRKEFRKVFETMVDPIFDQLSDDKKNFMYEKKASAWYQVTYHERWVKKS 1120

Query: 332  KELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
            KELQ+VDD G+TVMLSFAWIAADYL RIKIRRRRTEN IS+KPIDSLGRYL DKI
Sbjct: 1121 KELQVVDDTGETVMLSFAWIAADYLTRIKIRRRRTENTISSKPIDSLGRYLKDKI 1175


>ref|XP_019260524.1| PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana attenuata]
 gb|OIT39130.1| rna-dependent rna polymerase 6 [Nicotiana attenuata]
          Length = 1197

 Score = 1807 bits (4680), Expect = 0.0
 Identities = 880/1198 (73%), Positives = 1006/1198 (83%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGSE   K++VVTQISVGG + +V A+ML +Y E  +G VWRCRLK SSTPPDSYP +++
Sbjct: 1    MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTFDV 60

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            D E +QR  DYEKV PHAFVHFA   SA  AL AAG  ELIL  KPL VSLGPENP+ LN
Sbjct: 61   DAERVQRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            ++RRTT+P+K SDV +E+GV+ S+++FVVGWRGPRTGVDFLVDPFNG CK+ FTKDTAFS
Sbjct: 121  QRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTAFS 180

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            F+GE + A+IKCNF+IEFL REI EIK  +DF SL++LLQLASSPL++YRTADDDI+ESV
Sbjct: 181  FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
             FDLLDDDD WIRTTD T SGAIGRCNTYRIS+RPR GP   KA+ Y    RVP++    
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
            R  L V+DEPDFG+ M DPFFC Q  EGISFKV+FLVNAV+HKGI+NQHQM+ +FF LLR
Sbjct: 301  RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
            S  EEVN  ALKHM SYK P+ DA + L  ++KWLL NPKLLER  E++DIVEVRRL+IT
Sbjct: 360  SHQEEVNLAALKHMFSYKWPVNDAIQKLVGIRKWLLKNPKLLERTGELDDIVEVRRLVIT 419

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            P KAYCLPP VELSNRVLRNY+++ADRFLRVTFMDE M  LN+NVLTYY   + R ITSN
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            SNPQRT +F+RVK IL+ GF+LCGRKYSFLAFS+NQLRDRSAWFFAED    V  I +WM
Sbjct: 480  SNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            G+F+NRN+AKCAARMGQCFSSTYATVEVPS++VNS+LPDIERNGYVFSDGIGM+S  LAV
Sbjct: 540  GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAV 599

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSW 1782
            EVAEKL +S +PP AYQIRYAG KGV+A WP   DG  L LR SM+KF+SNHTILEICSW
Sbjct: 600  EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659

Query: 1781 TRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGS 1602
            TRFQPGFLNRQIVTLLS+L+V+DGIFW MQ+ M+S LD+ML D+D+AFDV+T SC + G+
Sbjct: 660  TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719

Query: 1601 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHG 1422
            TAAIMLSAGFKPQ+EPHLRGML+SIRA+QLGDLR KARIFVPSGRWLMGCLDELG LE G
Sbjct: 720  TAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779

Query: 1421 QCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPEL 1242
            QCFIQVS PSLE  F+KHG +FS+ +K LQVVKGLV IAKNPCLHPGDVRILEAVD P L
Sbjct: 780  QCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGL 839

Query: 1241 HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEAREL 1062
            HHL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSK+SWIPM+Y   E +++
Sbjct: 840  HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQM 899

Query: 1061 PRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPK 882
             R V H DII+FF+KNMV ESLG ICNAHVVHADLS++GALDEKC+KLAELAA+AVDFPK
Sbjct: 900  GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959

Query: 881  TGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFALE 702
            TGK+VTMP +LKPK+YPDFMGKEE Q+Y S KILGKLYR++KD  D   E S+       
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPN 1019

Query: 701  NITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSK 522
            +I YD  LEI GS +FI DAWN KCSYDGQL GLLGQYKVNREEE+VTGHIWSMPKYS+K
Sbjct: 1020 DIPYDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079

Query: 521  KQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWL 342
            KQGELKERLKHAY+TLRKEFR VFE M+P+FD L DDEKN MYE+KASAWYQVTY+  W+
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139

Query: 341  KKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
             +S ELQ+ D    TVMLSFAWIAADYLARIKIR R  +   STKPI+SLGRYL DKI
Sbjct: 1140 ARSLELQLPDAVSSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197


>ref|NP_001312583.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
 dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1806 bits (4678), Expect = 0.0
 Identities = 881/1198 (73%), Positives = 1005/1198 (83%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGSE   K +VVTQIS GG + +V A+ML +Y E  +G VWRCRLK SSTPPDSYP Y+I
Sbjct: 1    MGSEGSEKELVVTQISGGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDI 60

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            D E +QR ++YEKV PHAFVHFA   SA  AL AAG  ELIL  KPL VSLGPENP+ LN
Sbjct: 61   DAEKVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            ++RRTT+P+K SDV VE+GV+ S+++FVVGWRGPRTGVDF VDPFNG CK+ FTKDTAFS
Sbjct: 121  QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGTCKILFTKDTAFS 180

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            F+GE + A+IKCNF+IEF+ REI EIK  +DF SL++LLQLASSPL++YRTADDDI+ESV
Sbjct: 181  FRGEARHAIIKCNFKIEFMVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
             FDLLDDDD WIRTTD T SGAIGRCNTYRIS+RPR GP   KA+ Y    RVP++    
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
            R  L V+DEPDFG+ M DPFFC Q  EGISFKV+FLVNAV+HKGI+NQHQM+ +FF LLR
Sbjct: 301  RKMLRVKDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
            SR EEVN+ ALKHM SYK P+ DA + L  +QKWLL NPKLL+R  E++DIVEVRRL+IT
Sbjct: 360  SRQEEVNSAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLDRTGELDDIVEVRRLVIT 419

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            P KAYCLPP VELSNRVLRNY+++ADRFLRVTFMDE M  LN+NVLTYY   + R ITSN
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            SNPQRT +F+RVK IL+ GF+LCGRKYSFLAFS+NQLRDRSAWFFAED    V  I +WM
Sbjct: 480  SNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            G+F+NRN+AKCAARMGQCFSSTYATVEVPS +VNS+LPDIERNGYVFSDGIGM+S  LA+
Sbjct: 540  GRFSNRNVAKCAARMGQCFSSTYATVEVPSREVNSELPDIERNGYVFSDGIGMISADLAI 599

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSW 1782
            EVAEKL +S +PP AYQIRYAG KGV+A WP   DG  L LR SM+KF+SNHTILEICSW
Sbjct: 600  EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659

Query: 1781 TRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGS 1602
            TRFQPGFLNRQIVTLLS+L+V+DGIFW MQ+ M+S LD+ML D+D+AFDV+T SC + G+
Sbjct: 660  TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719

Query: 1601 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHG 1422
            TAAIMLSAGFKPQ+EPHLRGML+SIRA+QLGDLR KARIFVPSGRWLMGCLDELG LE G
Sbjct: 720  TAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779

Query: 1421 QCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPEL 1242
            QCFIQVS PSLE  FVKHG +FS+ ++ LQVVKGLV IAKNPCLHPGDVRILEAVD P L
Sbjct: 780  QCFIQVSSPSLENCFVKHGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839

Query: 1241 HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEAREL 1062
             HL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSK+SWIPM+Y   E ++L
Sbjct: 840  SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899

Query: 1061 PRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPK 882
             R V H DII+FF+KNMV ESLG ICNAHVVHADLS++GALDEKC+KLAELAA+AVDFPK
Sbjct: 900  GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959

Query: 881  TGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFALE 702
            TGK+VTMP +LKPK+YPDFMGKEE Q+Y S KILGKLYR++KD  D   E S+      +
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019

Query: 701  NITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSK 522
            +I YD  LEI GS +FI DAWN KCSYDGQL GLLGQYKVNREEE+VTGHIWSMPKYS+K
Sbjct: 1020 DIPYDSTLEILGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079

Query: 521  KQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWL 342
            KQGELKERLKHAY+TLRKEFR VFE MDP+FD L DDEKN MYE+KASAWYQVTYH  W+
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYHPHWV 1139

Query: 341  KKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
             +S ELQ+ D    TVMLSFAWIAADYLARIKIR RR +   STKPI+SLGRYL D I
Sbjct: 1140 ARSLELQLPDAVSNTVMLSFAWIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1805 bits (4676), Expect = 0.0
 Identities = 880/1198 (73%), Positives = 1007/1198 (84%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGSE   K +VVTQISVGG + +V A+ML +Y E  +G VWRCRLK SSTPPDSYP Y+I
Sbjct: 1    MGSEGCEKELVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDI 60

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            D E +QR ++YEKV PHAFVHFA   SA  AL AAG  ELIL  KPL VSLGPENP+ LN
Sbjct: 61   DAEKVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            ++RRTT+P+K SDV VE+GV+ S+++FVVGWRGPRTGVDFLVDPFNG CK+ FTKDTAFS
Sbjct: 121  QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTAFS 180

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            F+GE + A+IKCNF+IEFL REI EIK  +DF SL++L QLASSPL++YRTADDDI+ESV
Sbjct: 181  FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIEESV 240

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
             FDLLDDDD WIRTTD T SGAIGRCNTYRIS+RPR GP   KA+ Y   RRVP++    
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCN 300

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
            R  L V+DEPDFG+ M DPFFC Q  EGISF+VLFLVNAV+HKGI+NQHQM+ +FF LLR
Sbjct: 301  RKMLRVKDEPDFGVSMSDPFFCFQ-NEGISFRVLFLVNAVLHKGIVNQHQMANEFFYLLR 359

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
            S  EEVN+ ALKHM SYK P+ DA + L  +QKWLL NPKLL+R  E++DIVEVRRL+IT
Sbjct: 360  SHQEEVNSAALKHMFSYKWPVNDAIQKLAGIQKWLLKNPKLLDRTGELDDIVEVRRLVIT 419

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            P KAYCLPP VELSNRVLRNY+++ADRFLRVTFMDE M  LN+NVLTYY   + R ITSN
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            SNPQRT +F+RVK IL+ GF+LCGRKYSFLAFS+NQLRDRSAWFFAED    V  I +WM
Sbjct: 480  SNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            G+F+NRN+AKCAARMGQCFSSTYATVEVPS++VNS+LPDIERNGYVFSDGIGM+S  LA+
Sbjct: 540  GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAI 599

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSW 1782
            EVAEKL +S +PP AYQIRYAG KGV+A WP   DG  L LR SM+KF+SNHTILEICSW
Sbjct: 600  EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659

Query: 1781 TRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGS 1602
            TRFQPGFLNRQIVTLLS+L+V+DGIFW MQ+ M+S LD+ML D+D+AFDV+T SC + G+
Sbjct: 660  TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719

Query: 1601 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHG 1422
            TAA+MLSAGFKPQ+EPHLRGML+SIRA+QLGDLR KARIFVPSGRWLMGCLDELG LE G
Sbjct: 720  TAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779

Query: 1421 QCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPEL 1242
            QCFIQVS PSLE  FVKHG +FS+ +K LQVVKGLV IAKNPCLHPGDVRILEAVD P L
Sbjct: 780  QCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839

Query: 1241 HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEAREL 1062
             HL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSK+SWIPM+Y   E ++L
Sbjct: 840  SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899

Query: 1061 PRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPK 882
             R V H DII+FF+KNMV ESLG ICNAHVVHADLS++GALDEKC+KLAELAA+AVDFPK
Sbjct: 900  GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959

Query: 881  TGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFALE 702
            TGK+VTMP +LKPK+YPDFMGKEE Q+Y S KILGKLYR++KD  D   E S+      +
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019

Query: 701  NITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSK 522
            +I YD  LEI GS +FI DAWN KCSYDGQL GLLGQYKVNREEE+VTG+IWSMPKY++K
Sbjct: 1020 DIPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGYIWSMPKYNAK 1079

Query: 521  KQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWL 342
            KQGELKERLKHAY+TLRKEFR VFE M+P+FD L DDEKN MYE+KASAWYQVTYH  W+
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWV 1139

Query: 341  KKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
             +S ELQ+ D    TVMLSFAWIAADYLARIKIR RR +   STKPI+SLGRYL D I
Sbjct: 1140 ARSLELQLADAVSNTVMLSFAWIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197


>ref|XP_016477231.1| PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1805 bits (4676), Expect = 0.0
 Identities = 879/1198 (73%), Positives = 1005/1198 (83%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGSE   K++VVTQISVGG + +V A+ML +Y E  +G VWRCRLK S+TPPDSYP Y+I
Sbjct: 1    MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDI 60

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            D E + R  DYEKV PHAFVHFA   SA  AL AAG  ELIL  KPL VSLGPENP+ LN
Sbjct: 61   DAERVHRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            ++RRTT+P++ SDV VE+GV+ S+++FVVGWRGPRTGVDF VDPFNG C++ FTKDTAFS
Sbjct: 121  QRRRTTMPFRFSDVSVELGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACRILFTKDTAFS 180

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            F+GE + A+IKCNF+IEF+ REI EIK  +DF SL++LLQLASSPL++YRTADDDI+ESV
Sbjct: 181  FRGEARHAIIKCNFKIEFMVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
             FDLLDDDD WIRTTD T SGAIGRCNTYRIS+RPR GP   KA+ Y   RRVP++    
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCN 300

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
            R  L V+DEPDFG+ M DPFFC Q  EGISFKV+FLVNAV+HKGI+NQHQM+ +FF LLR
Sbjct: 301  RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
            SR EEVN  ALKHM SYK P+ DA + L  +QKWLL NPKLLER  E++DIVEVRRL+IT
Sbjct: 360  SRQEEVNLAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRRLVIT 419

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            P KAYCLPP VELSNRVLRNY+++ADRFLRVTFMDE M  LN+NVLTYY   + R ITSN
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            SNPQRT +F+RVK IL+ GF+LCGRKYSFLAFS+NQLRDRSAWFFAED    V  I +WM
Sbjct: 480  SNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            G+F+NRN+AKCAARMGQCFSSTYATVEVPS +VNS+LPDIERNGYVFSDGIGM+S  LA+
Sbjct: 540  GRFSNRNVAKCAARMGQCFSSTYATVEVPSREVNSELPDIERNGYVFSDGIGMISADLAI 599

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSW 1782
            EVAEKL +S +PP AYQIRYAG KGV+A WP   DG  L LR SM+KF+SNHTILEICSW
Sbjct: 600  EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659

Query: 1781 TRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGS 1602
            TRFQPGFLNRQIVTLLS+L+V+DGIFW MQ+ M+S LD+ML D+D+AFDV+T SC + G+
Sbjct: 660  TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719

Query: 1601 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHG 1422
            TAA+MLSAGFKPQ+EPHLRGML+SIRA+QLGDLR KARIFVPSGRWLMGCLDELG LE G
Sbjct: 720  TAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779

Query: 1421 QCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPEL 1242
            QCFIQVS PSLE  F+KHG +FS+ ++ LQVVKGLV IAKNPCLHPGDVRILEAVD P L
Sbjct: 780  QCFIQVSSPSLENCFIKHGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGL 839

Query: 1241 HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEAREL 1062
            HHL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSK+SWIPM+Y   E ++L
Sbjct: 840  HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899

Query: 1061 PRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPK 882
             R V H DII+FF+KNMV ESLG ICNAHVVHADLS++GALDEKC+KLAELAA+AVDFPK
Sbjct: 900  GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959

Query: 881  TGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFALE 702
            TGK+VTMP +LKPK+YPDFMGKEE Q+Y S KILGKLYR++KD  D   E S+       
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPN 1019

Query: 701  NITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSK 522
            +I YD  LEI GS +FI DAWN KCSYDGQL GLLGQYKVNREEE+VTGHIWSMPKYS+K
Sbjct: 1020 DIPYDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079

Query: 521  KQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWL 342
            KQGELKERLKHAY+TLRKEFR VFE MDP+FD L DDEKN MYE+KASAWYQVTY+  W+
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139

Query: 341  KKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
             +S ELQ+ D    TVMLSFAWIAADYLARIKIR R  +   STKPI+SLGRYL DKI
Sbjct: 1140 ARSLELQLPDAISSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1805 bits (4675), Expect = 0.0
 Identities = 882/1198 (73%), Positives = 1005/1198 (83%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGSE   K++VVTQISVGG + +V A+ML +Y E  +G VWRCRLK S+TPPDSYP Y+I
Sbjct: 1    MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDI 60

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            D E + R  DYEKV PHAFVHFA   SA  AL AAG  ELIL  KPL VSLGPENP+ LN
Sbjct: 61   DAERVHRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            ++RRTT+P+K SDV VE+GV+ S+++FVVGWRGPRTGVDFLVDPFNG CK+ FTKDTAFS
Sbjct: 121  QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTAFS 180

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            F+GE + A+IKCNF+IEFL REI EIK  +DF SL++L QLASSPL++YRTADDDI+ESV
Sbjct: 181  FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIEESV 240

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
             FDLLDDDD WIRTTD T SGAIGRCNTYRIS+RPR GP   KA+ Y   RRVP++    
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCN 300

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
            R  L V+DEPDFG+ M DPFFC Q  EGISFKV+FLVNAV+HKGI+NQHQM+ +FF LLR
Sbjct: 301  RKMLRVKDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
            SR EEVN  ALKHM SYK P+ DA + L  +QKWLL NPKLLER  E++DIVEVRRL+IT
Sbjct: 360  SRQEEVNLAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRRLVIT 419

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            P KAYCLPP VELSNRVLRNY+++ADRFLRVTFMDE M  LN+NVLTYY   + R ITSN
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            SNPQRT +F+RVK IL+ GF+LCGRKYSFLAFS+NQLRDRSAWFFAED    V  I +WM
Sbjct: 480  SNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            G+F+NRN+AKCAARMGQCFSSTYATVEVPS++VNS+LPDIERNGYVFSDGIGM+S  LA+
Sbjct: 540  GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAI 599

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSW 1782
            EVAEKL ++ +PP AYQIRYAGYKGV+A WP   DG  L LR SM+KF+SNHTILEICSW
Sbjct: 600  EVAEKLHLNVNPPSAYQIRYAGYKGVVACWPTKNDGILLSLRPSMKKFDSNHTILEICSW 659

Query: 1781 TRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGS 1602
            TRFQPGFLNRQIVTLLS+L+V+DGIFW MQ+ M+S LD+ML D+D+AFDV+T SC + G+
Sbjct: 660  TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719

Query: 1601 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHG 1422
            TAA+MLSAGFKPQ+EPHLRGML+SIRA+QLGDLR KARIFVPSGRWLMGCLDELG LE G
Sbjct: 720  TAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779

Query: 1421 QCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPEL 1242
            QCFIQVS PSLE  FVKHG +FS+ +K LQVVKGLV IAKNPCLHPGDVRILEAVD P L
Sbjct: 780  QCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839

Query: 1241 HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEAREL 1062
             HL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSK+SWIPM+Y   E ++L
Sbjct: 840  SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899

Query: 1061 PRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPK 882
             R V H DII+FF+KNMV ESLG ICNAHVVHADLS++GALDEKC+KLAELAA+AVDFPK
Sbjct: 900  GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959

Query: 881  TGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFALE 702
            TGK+VTMP +LKPK+YPDFMGKEE Q+Y S KILGKLYR++KD  D   E S+      +
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019

Query: 701  NITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSK 522
            +I YD  L I GS  FI DAWN KCSYDGQL GLLGQYKVNREEE+VTGHIWSMPKYS+K
Sbjct: 1020 DIPYDTTLVIPGSTVFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079

Query: 521  KQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWL 342
            KQGELKERLKHAY+TLRKEFR VFE MDP+FD L DDEKN MYE+KASAWYQVTY+  W+
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139

Query: 341  KKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
             +S ELQ+ D    TVMLSFAWIAADYLARIKIR R  +   STKPI+SLGRYL DKI
Sbjct: 1140 ARSLELQLPDAISSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score = 1805 bits (4675), Expect = 0.0
 Identities = 879/1198 (73%), Positives = 1005/1198 (83%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGSE   K++VVTQISVGG + +V A+ML +Y E  +G VWRCRLK SSTPPDSYP +++
Sbjct: 1    MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTFDV 60

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            D E +QR  DYEKV PHAFVHFA   SA  AL AAG  ELIL  KPL VSLGPENP+ LN
Sbjct: 61   DAERVQRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            ++RRTT+P+K SDV +E+GV+ S+++FVVGWRGPRTGVDFLVDPFNG CK+ FTKDTAFS
Sbjct: 121  QRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTAFS 180

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            F+GE + A+IKCNF+IEFL REI EIK  +DF SL++LLQLASSPL++YRTADDDI+ESV
Sbjct: 181  FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
             FDLLDDDD WIRTTD T SGAIGRCNTYRIS+RPR GP   KA+ Y    RVP++    
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
            R  L V+DEPDFG+ M DPFFC Q  EGISFKV+FLVNAV+HKGI+NQHQM+ +FF LLR
Sbjct: 301  RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
            S  EEVN  ALKHM SYK P+ DA + L  ++KWLL NPKLLER  E++DIVEVRRL+IT
Sbjct: 360  SHQEEVNLAALKHMFSYKWPVNDAIQKLVGIRKWLLKNPKLLERTGELDDIVEVRRLVIT 419

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            P KAYCLPP VELSNRVLRNY+++ADRFLRVTFMDE M  LN+NVLTYY   + R ITSN
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            SNPQRT +F+RVK IL+ GF+LCGRKYSFLAFS+NQLRDRSAWFFAED    V  I +WM
Sbjct: 480  SNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            G+F+NRN+AKCAARMGQCFSSTYATVEVPS++VNS+LPDIERNGYVFSDGIGM+S  LAV
Sbjct: 540  GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAV 599

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSW 1782
            EVAEKL +S +PP AYQIRYAG KGV+A WP   DG  L LR SM+KF+SNHTILEICSW
Sbjct: 600  EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659

Query: 1781 TRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGS 1602
            TRFQPGFLNRQIVTLLS+L+V+DGIFW MQ+ M+S LD+ML D+D+AFDV+T SC + G+
Sbjct: 660  TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719

Query: 1601 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHG 1422
            TAAIMLSAGFKPQ+EPHLRGML+SIRA+QLGDLR KARIFVPSGRWLMGCLDELG LE G
Sbjct: 720  TAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779

Query: 1421 QCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPEL 1242
            QCFIQVS PSLE  F+KHG +FS+ +K LQVVKGLV IAKNPCLHPGDVRILEAVD P L
Sbjct: 780  QCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGL 839

Query: 1241 HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEAREL 1062
            HHL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSK+SWIPM+Y   E +++
Sbjct: 840  HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQM 899

Query: 1061 PRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPK 882
             R V H DII+FF+KNMV ESLG ICNAHVVHADLS++GALDEKC+KLAELAA+AVDFPK
Sbjct: 900  GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959

Query: 881  TGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFALE 702
            TGK+VTMP +LKPK+YPDFMGKEE Q+Y S KILGKLYR++KD  D   E S+       
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPN 1019

Query: 701  NITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSK 522
            +I YD  LEI GS +FI DAWN KCSYDGQL GLLGQYKVNREEE+VTGHIWSMPKYS+K
Sbjct: 1020 DIPYDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079

Query: 521  KQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWL 342
            KQGELKERLKHAY+TLRKEFR VFE M+P+FD L DDEKN MYE+KASAWYQVTY+  W+
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139

Query: 341  KKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
             +S ELQ+ D    TVMLSFAWIAADYLARIKIR R  +   STKPI+SLGRYL D I
Sbjct: 1140 ARSLELQLPDAVSSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDNI 1197


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score = 1804 bits (4673), Expect = 0.0
 Identities = 881/1198 (73%), Positives = 1003/1198 (83%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGSE   K +VVTQISVGG + +V A+ML +Y E  +G VWRCRLK SSTPPDSYP Y+I
Sbjct: 1    MGSEGSEKELVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDI 60

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            D E +QR ++YEKV PHAFVHFA   SA  AL AAG  EL+L  KPL VSLGPENP+ LN
Sbjct: 61   DAERVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELVLGKKPLIVSLGPENPYRLN 120

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            ++RRTT+P+K SDV VE+GV+ S+ +FVVGWRGPRTGVDFLVDPFNG CK+ FTKDT FS
Sbjct: 121  QRRRTTMPFKFSDVSVEMGVLVSKHDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTVFS 180

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            F+GE + A+IKCNF+IEFL REI EIK  +DF SL++LLQLASSPL++YRTADDDI+ESV
Sbjct: 181  FRGEARHAIIKCNFKIEFLVREINEIKKCKDFMSLVILLQLASSPLVFYRTADDDIEESV 240

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
             FDLLDDDD WIRTTD T SGAIGRCNTYRIS+RPR GP   KA+ Y    RVP++    
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
            R  L V+DEPDFG+ M DPFFC Q  EGISFKVLFL NAV+HKGI+NQHQM  +FF LLR
Sbjct: 301  RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVLFLANAVLHKGIVNQHQMINEFFYLLR 359

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
            S  EEVN  ALKHM SYK P+ DA + L  +QKWLL NPKLLER  E++DIVEVRRL+IT
Sbjct: 360  SHQEEVNLAALKHMFSYKWPVNDAIQKLAGIQKWLLKNPKLLERTGELDDIVEVRRLVIT 419

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            P KAYCLPP VELSNRVLRNY+++ADRFLRVTFMDE M  LN+NVLTYY   + R ITSN
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            SNPQRT +F+RVK IL+ GF+LCGRKYSFLAFS+NQLRDRSAWFFAED    V  I +WM
Sbjct: 480  SNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            G+F+NRN+AKCAARMGQCFSSTYATVEVPS++VNS+LPDIERNGYVFSDGIGM+S  LA+
Sbjct: 540  GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAI 599

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSW 1782
            EVAEKL +S +PP AYQIRYAG KGV+A WP   DG  L LR SM+KF+SNHTILEICSW
Sbjct: 600  EVAEKLHLSVNPPAAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659

Query: 1781 TRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGS 1602
            TRFQPGFLNRQIVTLLS+L+V+DGIFW MQ+ M++ LD+ML D+D+AFDV+T SC + G+
Sbjct: 660  TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMIAGLDKMLVDSDVAFDVITASCAEAGN 719

Query: 1601 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHG 1422
            TAA+MLSAGFKPQ+EPHLRGML+SIRA+QLGDLR KARIFVPSGRWLMGCLDELG LE G
Sbjct: 720  TAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779

Query: 1421 QCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPEL 1242
            QCFIQVS PSLE  FVKHGS+FS+ +K LQVVKGLV IAKNPCLHPGDVRILEAVD P L
Sbjct: 780  QCFIQVSSPSLENCFVKHGSKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839

Query: 1241 HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEAREL 1062
             HL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDEN+IPPSK+SWIPM+Y   E ++L
Sbjct: 840  SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENIIPPSKKSWIPMNYEPAEVKQL 899

Query: 1061 PRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPK 882
             R V H DII+FF+KNMV ESLG ICNAHVVHADLS++GALDEKC+KLAELAA+AVDFPK
Sbjct: 900  GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959

Query: 881  TGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFALE 702
            TGK+VTMP +LKPK+YPDFMGKEE Q+Y S KILGKLYR++KD  D   E S+      +
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019

Query: 701  NITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSK 522
            +I YD  LEI GS +FI DAWN KCSYDGQL GLLGQYKVNREEE+VTGHIWSMPKYS+K
Sbjct: 1020 DIPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079

Query: 521  KQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWL 342
            KQGELKERLKHAY+TLRKEFR VFE M+P+FD L DDEKN MYE+KASAWYQVTYH  W+
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWV 1139

Query: 341  KKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
             +S ELQ+ D    TVMLSFAWIAADYLARIKIR R      STKPI+SLGRYLADKI
Sbjct: 1140 ARSLELQIPDAVSSTVMLSFAWIAADYLARIKIRHRGLPYSDSTKPINSLGRYLADKI 1197


>ref|XP_009758053.1| PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana sylvestris]
          Length = 1197

 Score = 1803 bits (4671), Expect = 0.0
 Identities = 878/1198 (73%), Positives = 1004/1198 (83%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGSE   K++VVTQISVGG + +V A+ML +Y E  +G VWRCRLK S+TPPDSYP Y+I
Sbjct: 1    MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDI 60

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            D E + R  DYEKV PHAFVHFA   SA  AL AAG  ELIL  KPL VSLGPENP+ LN
Sbjct: 61   DAERVHRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            ++RRTT+P++ SDV VE+GV+ S+++FVVGWRGPRTGVDF VDPFNG C++ FTKDTAFS
Sbjct: 121  QRRRTTMPFRFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACRILFTKDTAFS 180

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            F+GE + A+IKCNF+IEF+ REI EIK  +DF SL++LLQLASSPL++YRTADDDI+ESV
Sbjct: 181  FRGEARHAIIKCNFKIEFMVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
             FDLLDDDD WIRTTD T SGAIGRCNTYRIS+RPR GP   KA+ Y    RVP++    
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
            R  L V+DEPDFG+ M DPFFC Q  EGISFKV+FLVNAV+HKGI+NQHQM+ +FF LLR
Sbjct: 301  RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
            SR EEVN  ALKHM SYK P+ DA + L  +QKWL+ NPKLLER  E++DIVEVRRL+IT
Sbjct: 360  SRQEEVNLAALKHMFSYKWPVNDAIQKLVGIQKWLMKNPKLLERTGELDDIVEVRRLVIT 419

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            P KAYCLPP VELSNRVLRNY+++ADRFLRVTFMDE M  LN+NVLTYY   + R ITSN
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            SNPQRT +F+RVK IL+ GF+LCGRKYSFLAFS+NQLRDRSAWFFAED    V  I +WM
Sbjct: 480  SNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            G+F+NRN+AKCAARMGQCFSSTYATVEVPS +VNS+LPDIERNGYVFSDGIGM+S  LA+
Sbjct: 540  GRFSNRNVAKCAARMGQCFSSTYATVEVPSREVNSELPDIERNGYVFSDGIGMISADLAI 599

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSW 1782
            EVAEKL +S +PP AYQIRYAG KGV+A WP   DG  L LR SM+KF+SNHTILEICSW
Sbjct: 600  EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659

Query: 1781 TRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGS 1602
            TRFQPGFLNRQIVTLLS+L+V+DGIFW MQ+ M+S LD+ML D+D+AFDV+T SC + G+
Sbjct: 660  TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719

Query: 1601 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHG 1422
            TAAIMLSAGFKPQ+EPHLRGML+SIRA+QLGDLR KARIFVPSGRWLMGCLDELG LE G
Sbjct: 720  TAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779

Query: 1421 QCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPEL 1242
            QCFIQVS PSLE  F+KHG +FS+ ++ LQVVKGLV IAKNPCLHPGDVRILEAVD P L
Sbjct: 780  QCFIQVSSPSLENCFIKHGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGL 839

Query: 1241 HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEAREL 1062
            HHL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSK+SWIPM+Y   E ++L
Sbjct: 840  HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899

Query: 1061 PRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPK 882
             R V H DII+FF+KNMV ESLG ICNAHVVHADLS++GALDEKC+KLAELAA+AVDFPK
Sbjct: 900  GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959

Query: 881  TGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFALE 702
            TGK+VTMP +LKPK+YPDFMGKEE Q+Y S KILGKLYR++KD  D   E S+       
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPN 1019

Query: 701  NITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSK 522
            +I YD  LEI GS +FI DAWN KCSYDGQL GLLGQYKVNREEE+VTGHIWSMPKYS+K
Sbjct: 1020 DIPYDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079

Query: 521  KQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWL 342
            KQGELKERLKHAY+TLRKEFR VFE MDP+FD L DDEKN MYE+KASAWYQVTY+  W+
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139

Query: 341  KKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
             +S ELQ+ D    TVMLSFAWIAADYLARIKIR R  +   STKPI+SLGRYL DKI
Sbjct: 1140 ARSLELQLPDAISSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score = 1797 bits (4654), Expect = 0.0
 Identities = 875/1198 (73%), Positives = 1000/1198 (83%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGSE   K++VVTQISVGG + +V A+ML +Y E  +G VWRCRLK S+TPPDSYP Y++
Sbjct: 1    MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDV 60

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            D   + R  DYEKV PHAFVHFA   SA  AL AAG   LIL  KPL VSLGPENP+ LN
Sbjct: 61   DAARVHRMKDYEKVVPHAFVHFASSESAKYALAAAGGNGLILGKKPLIVSLGPENPYRLN 120

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            ++RRTT+P+K SDV VE+GV+ S+++FVVGWRGPRTGVDF VDPFNG CK+ FTKDTAFS
Sbjct: 121  QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACKILFTKDTAFS 180

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            F+GE K A+IKCNF+IEF+ REI EIK ++DF SL++LLQLASSPL++YRTADDDI+ESV
Sbjct: 181  FRGEAKHAIIKCNFKIEFMVREINEIKKFKDFTSLVILLQLASSPLVFYRTADDDIEESV 240

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
             FDLLDDDD WIRTTD T SGAIGRCNTYRIS+RPR GP   KA+ Y    RVP++    
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
            R  L V+DEPDFG+ M DPFFC Q  EGISFKV+FLVNAV+HKGI+NQHQM+ +FF LLR
Sbjct: 301  RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
            S  EEVN  ALKHM SYK P+ DA + L  +QKWLL NPKLLER  E++DIVEVRRL+IT
Sbjct: 360  SHQEEVNLAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRRLVIT 419

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            P KAYCLPP VELSNRVLRNY+++ADRFLRVTFMDE M  LN+NVLTYY   + R ITSN
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            SNPQRT +F+RVK IL+ GF+LCGRKYSFLAFS+NQLRDRSAWFFAED    V  I +WM
Sbjct: 480  SNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            G+F+NRN+AKCAARMGQCFSSTYATVEVPS++VNS+LPDIERNGYVFSDGIGM+S  LA+
Sbjct: 540  GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAL 599

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSW 1782
            EVAEKL +S +PP AYQIRYAG KGV+A WP   DG  L LR SM+KF+SNHTILEICSW
Sbjct: 600  EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGILLSLRPSMKKFDSNHTILEICSW 659

Query: 1781 TRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGS 1602
            TRFQPGFLNRQIVTLLS+L+V+DGIFW MQ+ M+S L++ML D+D+AFDV+T SC + G+
Sbjct: 660  TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLNKMLVDSDVAFDVITASCAEAGN 719

Query: 1601 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHG 1422
            TAAIMLSAGFKPQ+EPHLRGML+SIRA+QLGDLR KARIFVPSGRWLMGCLDELG LE G
Sbjct: 720  TAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779

Query: 1421 QCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPEL 1242
            QCFIQVS PSLE  F+KHG +FS+ +K LQVVKGLV IAKNPCLHPGDVRILEAVD P L
Sbjct: 780  QCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGL 839

Query: 1241 HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEAREL 1062
            HHL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSK+SWIPM+Y   E ++L
Sbjct: 840  HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899

Query: 1061 PRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPK 882
             R V H DII+FF+KNMV ESLG ICNAHVVHADLS++GALDEKC+KLAELAA+AVDFPK
Sbjct: 900  GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959

Query: 881  TGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFALE 702
            TGK+VTMP +LKPK+YPDFMGKEE Q+Y S KILGKLYR++KD  D   E S+       
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPN 1019

Query: 701  NITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSK 522
            +I YD  LEI GS  F+ DAWNCKCSYDGQL GLLGQYKVNREEE+VTGHIWSMPKYS+K
Sbjct: 1020 DIPYDSSLEIPGSTVFMGDAWNCKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079

Query: 521  KQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWL 342
            KQGELKERLKHAY+ LRKEFR VFE MDP+FD L DDEKN MYE+KASAWYQVTY+  W+
Sbjct: 1080 KQGELKERLKHAYNMLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139

Query: 341  KKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
             +S ELQ+ D    TVMLSFAWIAADYLARI IR R  +   STKPI+SLGRYL D I
Sbjct: 1140 ARSLELQLPDAVSSTVMLSFAWIAADYLARINIRHRGLQYSDSTKPINSLGRYLVDNI 1197


>ref|XP_010648660.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score = 1782 bits (4616), Expect = 0.0
 Identities = 871/1200 (72%), Positives = 1015/1200 (84%), Gaps = 2/1200 (0%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            M SE   K+MVVTQIS+GG ++ VTA  L  Y E++IG V RCRLKTSSTPP+SYP++EI
Sbjct: 1    MESEGSEKDMVVTQISIGGFDQYVTATELTYYLEDTIGSVDRCRLKTSSTPPESYPDFEI 60

Query: 3581 -DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHL 3405
             DT  I+R +DY+KVEPHAFVHF    +AT ALDAAG+ EL L GKPLKVSLGPE P HL
Sbjct: 61   IDTAKIERTEDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKVSLGPETPFHL 120

Query: 3404 NEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAF 3225
            N++RRTT P+K  DV +E+G++ SR+E+  GWRGP +GVDFLVDPF+G CK  FTKDTAF
Sbjct: 121  NQRRRTTFPFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCKFLFTKDTAF 180

Query: 3224 SFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKES 3045
            SFKG  K AVIKCNF++EFL REI E++  RD  SLI+LLQL+SSP +YYRTADDDI+E+
Sbjct: 181  SFKGMPKHAVIKCNFKVEFLVREINEVRQRRDMSSLILLLQLSSSPFVYYRTADDDIEET 240

Query: 3044 VPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYES 2865
            VPFDLLDDDDPWIRTTDFT SGAIGRCN+YRIS+ PRYG  L KA++YLR RRV V+ +S
Sbjct: 241  VPFDLLDDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKAMDYLRARRVNVLEDS 300

Query: 2864 PRHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLL 2685
            P+ +L V+DEPDFG+PM DPFFCIQ+KEGI F+V+FLVNAVMHKGIINQHQ+S+KFFDLL
Sbjct: 301  PKWQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNAVMHKGIINQHQLSDKFFDLL 360

Query: 2684 RSRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLII 2505
            RS+ +++N  ALKH+CSY+HP++DA++ L+LV KWLL NPKLL+ P+E++DIVEVRRL+I
Sbjct: 361  RSQQKDINIAALKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDIVEVRRLVI 420

Query: 2504 TPAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITS 2325
            TP+KAYCLPPEVELSNRVLRNY+ ++DRFLRVTFMDE M T+N NVL YYV P+ + ITS
Sbjct: 421  TPSKAYCLPPEVELSNRVLRNYKEVSDRFLRVTFMDEGMQTINANVLNYYVAPIVKVITS 480

Query: 2324 NSNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNW 2145
            NS PQ+T +FKRVK IL +GFYLCGRKYSFLAFSSNQLRDRSAWFFAEDK T V  IK+W
Sbjct: 481  NSFPQKTRVFKRVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKKTSVRAIKSW 540

Query: 2144 MGKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLA 1965
            MGKFTNRN+AKCAARMGQCFSSTYATVEVPS +V  +LPDI+RNGY FSDGIG +   LA
Sbjct: 541  MGKFTNRNVAKCAARMGQCFSSTYATVEVPSWEV-KELPDIKRNGYDFSDGIGKIVPDLA 599

Query: 1964 VEVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICS 1785
            +EVAEKL++    P AYQIRYAG KGV+A WP+  DG  L  R SM KF S+HTILEICS
Sbjct: 600  MEVAEKLKLE-GTPSAYQIRYAGCKGVVACWPSDNDGIRLSWRPSMNKFLSDHTILEICS 658

Query: 1784 WTRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQG 1605
            WTRFQPGFLNRQIVTLLSAL V D IFW+MQE+M+S+L++ML DTD+AFDV+  SC +QG
Sbjct: 659  WTRFQPGFLNRQIVTLLSALNVPDKIFWKMQESMISKLNQMLTDTDVAFDVLIASCAEQG 718

Query: 1604 STAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEH 1425
            +TAAIMLSAGFKPQTEPHL+GMLT IRAAQ   LREKARIFVPSGRWLMGCLDELGVLE 
Sbjct: 719  NTAAIMLSAGFKPQTEPHLQGMLTCIRAAQFWGLREKARIFVPSGRWLMGCLDELGVLEQ 778

Query: 1424 GQCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPE 1245
            GQCFIQVS PSLE  F+KHGSRFS  +K L+V+KG+VAIAKNPCLHPGDVRILEAVDAP 
Sbjct: 779  GQCFIQVSSPSLENCFLKHGSRFSA-QKNLKVIKGIVAIAKNPCLHPGDVRILEAVDAPG 837

Query: 1244 LHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEARE 1065
            L HL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTW+E LIPPSK+SW PM Y + EA+ 
Sbjct: 838  LEHLVDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWEETLIPPSKQSWPPMQYDSAEAKA 897

Query: 1064 LPRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFP 885
            L R+V   DII+FFTKNMVNE+LG ICNAHVVHAD S+YGALDE C+ LAE AA AVDFP
Sbjct: 898  LAREVTSLDIIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEACLDLAERAATAVDFP 957

Query: 884  KTGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFAL 705
            KTGK+VT+PP LKPK+YPDFMGKEE QTY SNKILGK+YR+IKDA +    ESSEQ F  
Sbjct: 958  KTGKLVTLPPYLKPKMYPDFMGKEEFQTYRSNKILGKMYRQIKDAYNEDVSESSEQIFGA 1017

Query: 704  ENITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSS 525
            + + +D+DL I GS  FI DAW  KCSYDGQL GLLGQYKV REEE+VTGH+WSMPKY S
Sbjct: 1018 DKVPFDEDLGIPGSADFINDAWIHKCSYDGQLNGLLGQYKVKREEEVVTGHVWSMPKYKS 1077

Query: 524  KKQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESW 345
            +KQGEL ERLKHAYS+L+KEFR++FE M+ +FDQL+DDEKN +YE+KASAWYQVTYH +W
Sbjct: 1078 RKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTW 1137

Query: 344  LKKSKELQMVDDA-GKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
            +KKS ELQ  D+  G+ VMLSFAWI ADYLARIKIRR+ T N  S+KPI+SL R+L D+I
Sbjct: 1138 VKKSLELQNPDEVFGERVMLSFAWITADYLARIKIRRKGTGNVDSSKPINSLARFLVDRI 1197


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Solanum tuberosum]
 ref|XP_006346785.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Solanum tuberosum]
          Length = 1198

 Score = 1768 bits (4578), Expect = 0.0
 Identities = 860/1198 (71%), Positives = 996/1198 (83%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGSE   K++VVTQISVGG   +V A+ML +  E+ +G VWRCRLKTSSTPPDSYP Y+I
Sbjct: 1    MGSEGSEKDLVVTQISVGGFSNDVNAKMLSECLEDQVGQVWRCRLKTSSTPPDSYPTYDI 60

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            D E ++R ++Y KVEPHAFVHFA   SA +AL AA R EL L  KPLKVSLGPENP ++N
Sbjct: 61   DVENVRRMNNYIKVEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENPFNMN 120

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            ++RRT +P+K SDV VE+GV+ S ++FVVGWRGP +GV+FLVDPFNG CK+ FT+DTAF 
Sbjct: 121  KRRRTIMPFKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGTCKILFTRDTAFC 180

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            FKGE K AVIKCNF+IEFL REI EI   +DF SL++LLQL SSPL++YRTADDDI+ESV
Sbjct: 181  FKGEGKHAVIKCNFKIEFLLREINEINECKDFASLVLLLQLTSSPLVFYRTADDDIEESV 240

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
             FDLLDDDD WIRTTD T SGAIGR NTYRIS+RPR GP L KA+ Y R+ RVPV+ +  
Sbjct: 241  AFDLLDDDDQWIRTTDITCSGAIGRFNTYRISIRPRNGPSLKKAMNYFRESRVPVVEQGN 300

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
            R  L V+DEPDFG+ + +PFFC Q  EGISFKVLFLVNAV+ KGI+NQHQM+ +FF LLR
Sbjct: 301  RQMLRVRDEPDFGVSLSEPFFCFQNHEGISFKVLFLVNAVLQKGIVNQHQMTAEFFSLLR 360

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
               E VN  ALKH+ SYK P+ DA + L  VQKWL  NP LLER  +++D+VEVRRL+IT
Sbjct: 361  KHQEGVNLAALKHIFSYKRPVNDAIQKLASVQKWLFKNPNLLERTGQLDDVVEVRRLVIT 420

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            P KAYCLPP VELSNRVLR Y++++DRFLRVTFMDE M  LN+NVLTYY   + R ITS+
Sbjct: 421  PTKAYCLPPTVELSNRVLRKYKHVSDRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSS 480

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            SNPQRT +F+RVK IL+ GFYLCGR+YSFLAFS+NQLRDRSAWFFAE     V NI NWM
Sbjct: 481  SNPQRTGIFQRVKSILSKGFYLCGRRYSFLAFSANQLRDRSAWFFAEAPEIRVPNIINWM 540

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            GKF NRN+AKCAARMGQCFSSTYATVEV  ++VNS+LPDIERNGYVFSDGIGMMS  L++
Sbjct: 541  GKFGNRNVAKCAARMGQCFSSTYATVEVLPSEVNSELPDIERNGYVFSDGIGMMSADLSI 600

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSW 1782
            EVA KLQ+S +PPCAYQIRYAG KGV+A WP  KDG  L LR SM+KF+SNHTILEICSW
Sbjct: 601  EVAAKLQLSVNPPCAYQIRYAGCKGVVACWPAEKDGIRLSLRPSMKKFDSNHTILEICSW 660

Query: 1781 TRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGS 1602
            TR QPGFLNRQI+TLLS+LEV+D +FW MQ+ M+S+LD++L D+D+AFDV+T SC + G+
Sbjct: 661  TRLQPGFLNRQIITLLSSLEVKDEMFWEMQKEMLSKLDKILVDSDVAFDVITASCAEAGN 720

Query: 1601 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHG 1422
            TAAIMLSAGFKPQ+EPHLRGML SIRAAQLGDLR K R+FVPSGRWLMGCLDEL  LE G
Sbjct: 721  TAAIMLSAGFKPQSEPHLRGMLASIRAAQLGDLRNKTRMFVPSGRWLMGCLDELRKLEQG 780

Query: 1421 QCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPEL 1242
            QCFIQVS PSLE  FVKHG +FSE +K LQV+KGLV IAKNPCLHPGDVRILEAVD P L
Sbjct: 781  QCFIQVSSPSLETCFVKHGPKFSEIKKNLQVIKGLVVIAKNPCLHPGDVRILEAVDVPGL 840

Query: 1241 HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEAREL 1062
            HHL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSK+SW+PMDYA  EA++L
Sbjct: 841  HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMDYAPAEAKQL 900

Query: 1061 PRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPK 882
             R V+H+DII+FF+KNMV ESLG ICNAHVVHADLS++GALDEKC+KLAELAA+AVDFPK
Sbjct: 901  GRQVQHTDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 960

Query: 881  TGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFALE 702
            TGK+VTMP +LKPK+YPDFMGKE  QTY S KILGKLYR++ D  D    ESS   F  +
Sbjct: 961  TGKLVTMPFDLKPKMYPDFMGKEPFQTYESKKILGKLYRQVIDVYDAEGGESSGLEFVPK 1020

Query: 701  NITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSK 522
            +I YD ++EI G + FI DAWN KCSYDGQL GLLGQYKVN EEE+VTGHIWSMPKYS+K
Sbjct: 1021 DIPYDTNIEILGYEDFIDDAWNHKCSYDGQLNGLLGQYKVNGEEEVVTGHIWSMPKYSAK 1080

Query: 521  KQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWL 342
            KQGELKERLKHAY+TLRKEFR VFE M+P+FD L  DEKN MYE+KASAWY+VTYH  W+
Sbjct: 1081 KQGELKERLKHAYNTLRKEFRNVFEQMEPDFDMLPVDEKNDMYERKASAWYRVTYHPHWV 1140

Query: 341  KKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
             +S ELQ+ D     VMLSFAWIAADY+ARIKIR+R  +N  STKPI+ LGRYL +KI
Sbjct: 1141 TRSLELQLPDAVSNGVMLSFAWIAADYIARIKIRQRGMQNSDSTKPINFLGRYLVNKI 1198


>ref|XP_015885879.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885880.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885881.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885882.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885883.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
          Length = 1197

 Score = 1764 bits (4570), Expect = 0.0
 Identities = 854/1199 (71%), Positives = 1002/1199 (83%), Gaps = 1/1199 (0%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGS+ + K MVVTQ+S+GG +++V A+ L D+ E+ IG+V+RCRLKTSSTPP+SYP+Y I
Sbjct: 1    MGSKENEKQMVVTQVSLGGFDRHVRAKDLSDFLEDEIGLVYRCRLKTSSTPPESYPDYTI 60

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            DT  I+RKDDY+KVEPHAFVHFA+  SA   LDAAGR ELIL  +PLKVSLGPENP+ LN
Sbjct: 61   DTAAIERKDDYKKVEPHAFVHFALAESAKWILDAAGRCELILNDRPLKVSLGPENPYRLN 120

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            ++RRTT P KLSDV V++G + +R++F + WRGP  GVDFLVDPF+G CK  FT+DTAFS
Sbjct: 121  QRRRTTTPIKLSDVVVDIGTLVTRDQFFIAWRGPPYGVDFLVDPFDGTCKFCFTRDTAFS 180

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            FKG +  AVIKC+F++EFL R+I E K Y D   L++LLQL S+P I+YRTADDDI +SV
Sbjct: 181  FKGSLNHAVIKCDFKMEFLVRDINEFKQYTDTSYLVLLLQLNSAPRIWYRTADDDIDDSV 240

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
            P+D+LDDDDPWIRTTDFTPSGAIGR N+YRISV PR+G  L KA+ YLR+RRV   ++S 
Sbjct: 241  PYDMLDDDDPWIRTTDFTPSGAIGRSNSYRISVPPRHGAKLKKAISYLRERRVH--HDSL 298

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
            R  L +Q EPDF MPM DPFFCI YKE I F+ +FLVNAV+HKGI NQHQ+S+ FF+LLR
Sbjct: 299  RWPLRIQKEPDFDMPMSDPFFCIHYKEDIDFETMFLVNAVIHKGIFNQHQISDGFFNLLR 358

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
            ++ +EVN  ALKH+ SYK P++DA + L++VQ+WLL +PKL ++P+ ++DI EVRRL+IT
Sbjct: 359  NQMKEVNVAALKHISSYKRPVFDACRRLKVVQEWLLRDPKLFKKPKRLDDIAEVRRLVIT 418

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            P +AYCLPPEVELSNRVLRNY+ +ADRFLRVTFMDE M T+N NVLTY+V  + R ITSN
Sbjct: 419  PTRAYCLPPEVELSNRVLRNYKEVADRFLRVTFMDEGMQTINSNVLTYHVASIVREITSN 478

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            S PQ+T +F+R+K IL NGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKN  V  +K+WM
Sbjct: 479  SFPQKTKVFQRIKSILTNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNINVFEVKSWM 538

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            G+FTNRN+AKCAARMG CFSSTYA+VEVPSTQVN   PDI+RNGY FSDGIG ++  LA+
Sbjct: 539  GRFTNRNVAKCAARMGLCFSSTYASVEVPSTQVNRGFPDIKRNGYTFSDGIGKITPDLAL 598

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARW-PNIKDGTHLHLRTSMRKFESNHTILEICS 1785
            EVA+KL++  +PPCAYQIRYAG+KGV+A W P   DG  L LR SM KF+SNHTILEICS
Sbjct: 599  EVAQKLKLERNPPCAYQIRYAGFKGVVACWKPTDDDGARLSLRPSMDKFQSNHTILEICS 658

Query: 1784 WTRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQG 1605
            WTRFQPGFLNRQIVTLLSAL V D IFW MQETM+ +L++ML DTD+AFDV+T SC +QG
Sbjct: 659  WTRFQPGFLNRQIVTLLSALNVSDEIFWNMQETMIFKLNQMLIDTDIAFDVLTASCAEQG 718

Query: 1604 STAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEH 1425
            + AAIMLSAGF PQ EPHLRGMLT IRAAQL  LREKARIFVPSGRWLMGCLDELGVLE 
Sbjct: 719  NVAAIMLSAGFSPQKEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQ 778

Query: 1424 GQCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPE 1245
            GQCFIQVS PSLE  F KHGSRF+E    L+V+KG V IAKNPCLHPGDVRILEAVD P+
Sbjct: 779  GQCFIQVSNPSLENCFSKHGSRFNERNDNLEVIKGFVVIAKNPCLHPGDVRILEAVDVPD 838

Query: 1244 LHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEARE 1065
            LHHL+DCLVFPQKG+RPHTNEASGSDLDGDLYFVTWDENLIPPSK+SWIPM Y A E ++
Sbjct: 839  LHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMQYDAAETKQ 898

Query: 1064 LPRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFP 885
            L R V   DIIEFF+KNMVNE+LGTICNAHVVHADLS++GALDEKC+KLA+LAA AVDFP
Sbjct: 899  LTRPVTQEDIIEFFSKNMVNENLGTICNAHVVHADLSEHGALDEKCLKLADLAATAVDFP 958

Query: 884  KTGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFAL 705
            KTGKIVTMP  LKPKLYPDFMGK+E Q+Y SNKILGKLYRKIKDA D     SSE  F  
Sbjct: 959  KTGKIVTMPFNLKPKLYPDFMGKDEYQSYKSNKILGKLYRKIKDAYDEDVTASSEINFLP 1018

Query: 704  ENITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSS 525
             +I YD DLE++G+  FI DAW  KCSYDGQL GLLGQYKVNREEE+VTGHIWSMPKYSS
Sbjct: 1019 SDIPYDIDLEVSGASDFIVDAWEQKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSS 1078

Query: 524  KKQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESW 345
            +KQGELKERLKH+YS L+KEFR++FE M+ +F++LSDDEKNI+YE+KASAWYQVTYH  W
Sbjct: 1079 RKQGELKERLKHSYSALKKEFRQIFEKMEEKFEELSDDEKNIIYEQKASAWYQVTYHPEW 1138

Query: 344  LKKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
            +KKS +LQ  D +   VMLSFAWIAADYL RIKIR R   N    KPI++LG+YL+D++
Sbjct: 1139 VKKSLDLQEPDGSRYAVMLSFAWIAADYLTRIKIRCRGVGNVDCDKPINALGKYLSDRM 1197


>ref|XP_016572020.1| PREDICTED: RNA-dependent RNA polymerase 6 [Capsicum annuum]
 gb|PHT62523.1| RNA-dependent RNA polymerase 6 [Capsicum annuum]
          Length = 1196

 Score = 1763 bits (4567), Expect = 0.0
 Identities = 860/1198 (71%), Positives = 993/1198 (82%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGSE     +VVTQISVGG + NV A+ L +Y E  +G VWRCRLKTSSTPP+SYP Y+I
Sbjct: 1    MGSEGSEMTLVVTQISVGGFDNNVNAKKLSEYLEEQVGQVWRCRLKTSSTPPESYPVYDI 60

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            D E ++R ++YEKVEPHAFVHFA   SA +AL AA R EL+L  KPLKVSLGPEN H +N
Sbjct: 61   DAEKVRRMNNYEKVEPHAFVHFASSGSAKNALAAARRDELLLE-KPLKVSLGPENFHKMN 119

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            ++R  T+PYK SDV VE+G + S ++FVVGWRGP TGV+FLVDPF+G CK+ FTKDT F 
Sbjct: 120  QRRSDTLPYKFSDVNVEIGALVSSDDFVVGWRGPHTGVNFLVDPFDGTCKILFTKDTVFG 179

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            FKGE + AVIKCNF+IEFL REI EIK Y+DF SL++LL LAS+PL++YRTADDDI+ESV
Sbjct: 180  FKGEGRHAVIKCNFKIEFLLREINEIKEYKDFSSLVILLHLASAPLVFYRTADDDIEESV 239

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
             FDLLDDDD WIRTTD T SGAIGR NTYRIS+RPR GP   KA+ Y +  RVPV+ +  
Sbjct: 240  AFDLLDDDDQWIRTTDITCSGAIGRLNTYRISIRPRNGPSFNKAMNYFKSSRVPVVEQRI 299

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
              RL V+DEPDFG+ M +PFFC    EGISFKVLF+VNAVMHKGIINQHQM+ +FF LLR
Sbjct: 300  GQRLRVRDEPDFGVSMSEPFFCFHNHEGISFKVLFMVNAVMHKGIINQHQMTAEFFSLLR 359

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
            +  E VN  ALKH+ SYK P+ DA   L  +Q+WL NNP LLER  +++DIVEVRRL IT
Sbjct: 360  THEEGVNLSALKHIFSYKRPVNDAIHKLSRIQRWLFNNPNLLERTGQLDDIVEVRRLAIT 419

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            P KAYCLPP VELSNRVLR Y++++DRFLRVTFMDE M  LN+ VLTYY   + R ITSN
Sbjct: 420  PTKAYCLPPTVELSNRVLRKYKHVSDRFLRVTFMDEGMRNLNRKVLTYYAANIVREITSN 479

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            SNPQRT +F+RVK +L NGFYLCGRKYSFLAFS+NQLRDRSAWFFAE     V NI NWM
Sbjct: 480  SNPQRTAIFQRVKSMLINGFYLCGRKYSFLAFSANQLRDRSAWFFAETPEIRVPNIINWM 539

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            G F+NRN+AKCAARMGQCFSSTYATVEV  ++VNS+LPDIERN YVFSDGIGMMS  LA+
Sbjct: 540  GMFSNRNVAKCAARMGQCFSSTYATVEVLPSKVNSELPDIERNDYVFSDGIGMMSEDLAI 599

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSW 1782
            EVAEKLQ+S +PPCAYQIRYAGYKGV+  WP   DG  L LRTSM+KF+SNHTILEICSW
Sbjct: 600  EVAEKLQLSVNPPCAYQIRYAGYKGVVTCWPGKNDGFSLSLRTSMKKFDSNHTILEICSW 659

Query: 1781 TRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGS 1602
            TR QPGFLNRQI+TLLS+L+V+D IFW MQ+ M++RLD++L ++D+AFDVVT SC + G+
Sbjct: 660  TRSQPGFLNRQIITLLSSLDVKDAIFWEMQKEMLTRLDKILVNSDVAFDVVTASCGEAGN 719

Query: 1601 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHG 1422
            T AIMLSAGFKPQ+EPHLRGML+SIRAAQLGDLR KARIFVPSGRWLMGCLDELG LE G
Sbjct: 720  TVAIMLSAGFKPQSEPHLRGMLSSIRAAQLGDLRNKARIFVPSGRWLMGCLDELGKLEQG 779

Query: 1421 QCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPEL 1242
            QCFIQVS PSLE  FVKHG  FS+ +K LQV+KGLV IAKNPCLHPGDVRILEAVD P L
Sbjct: 780  QCFIQVSSPSLENCFVKHGPEFSDIKKNLQVIKGLVIIAKNPCLHPGDVRILEAVDVPGL 839

Query: 1241 HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEAREL 1062
            HHL+DCLVFPQKGDRPH NEASGSDLDGDLYFVTWDENLIPPSK+SW+PM Y   EA++L
Sbjct: 840  HHLYDCLVFPQKGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMAYDPAEAKQL 899

Query: 1061 PRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPK 882
             R V+H+DI+EFF+K+MV ESLG ICNAHVVHADLS++GA+DEKC+KLAELAA+AVDFPK
Sbjct: 900  GRPVKHADIVEFFSKHMVQESLGEICNAHVVHADLSEFGAMDEKCLKLAELAALAVDFPK 959

Query: 881  TGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFALE 702
            TGK+VTMP +LKPK+YPDFMGKE  Q+Y S KILGKL+R++KD +  G  ESS   +  E
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEAFQSYESKKILGKLFRQVKDCDAEG-GESSGLEYVPE 1018

Query: 701  NITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSK 522
            NI YD +LEI G + FI D W+ KCSYDGQLIGLLGQYKVNREEE+V+GHIWSMPKYSSK
Sbjct: 1019 NIPYDTNLEIPGYEDFIDDTWSLKCSYDGQLIGLLGQYKVNREEEVVSGHIWSMPKYSSK 1078

Query: 521  KQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWL 342
            KQGELKERLKHAY+TLRKEFR VFE M P FD LS+DEKN +YE+KASAWY+VTYH  W+
Sbjct: 1079 KQGELKERLKHAYNTLRKEFRNVFEQMGPNFDLLSNDEKNTIYERKASAWYRVTYHPQWV 1138

Query: 341  KKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
             +S ELQ+ D A  +VMLSFAWIAADYLARIKIR R  +   STKPI+SLGRYL +KI
Sbjct: 1139 TRSLELQLPDAASNSVMLSFAWIAADYLARIKIRHRGMQRSDSTKPINSLGRYLVNKI 1196


>ref|XP_015073465.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Solanum pennellii]
 ref|XP_015073466.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Solanum pennellii]
          Length = 1197

 Score = 1758 bits (4552), Expect = 0.0
 Identities = 859/1198 (71%), Positives = 995/1198 (83%)
 Frame = -1

Query: 3761 MGSEIDGKNMVVTQISVGGLEKNVTAEMLMDYFENSIGMVWRCRLKTSSTPPDSYPNYEI 3582
            MGSE   KN+VVTQISVGG   +V A+ML +Y E  +G VWRCRLKTSSTPPDSYP Y+I
Sbjct: 1    MGSEGSEKNLVVTQISVGGFSNDVNAKMLSEYLEEQVGQVWRCRLKTSSTPPDSYPTYDI 60

Query: 3581 DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 3402
            D E ++R ++Y KVEPHAFVHFA   SA +AL AA R EL L  KPLKVSLGPEN  ++N
Sbjct: 61   DLEKVRRMNNYIKVEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENTFNMN 120

Query: 3401 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 3222
            ++RRT +P+K SDV VE+GV+ S ++FVVGWRGP +GV+FLVDPFN  CK+ FT+DTAF 
Sbjct: 121  KRRRTFMPFKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNETCKILFTRDTAFC 180

Query: 3221 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 3042
            FKGE K AVIKCNF+IEFL REI EI   +DF SL++LLQLASSPL++YRTADDDI+ESV
Sbjct: 181  FKGEGKHAVIKCNFKIEFLLREINEINECKDFSSLVLLLQLASSPLVFYRTADDDIEESV 240

Query: 3041 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 2862
             FDLLDDDD WIRTTD T SGAIGR NTYR+S+RPR GP L KA+ + R+ RVPV+ E  
Sbjct: 241  AFDLLDDDDQWIRTTDITCSGAIGRFNTYRVSIRPRNGPSLKKAMNHFRESRVPVV-EQG 299

Query: 2861 RHRLLVQDEPDFGMPMLDPFFCIQYKEGISFKVLFLVNAVMHKGIINQHQMSEKFFDLLR 2682
            +  L V++EPDFG  + +PFFC Q  EGISFKVLFLVNAV+HKGI+NQHQM+ +FF LLR
Sbjct: 300  KQMLRVRNEPDFGESVSEPFFCFQNHEGISFKVLFLVNAVLHKGIVNQHQMTAEFFSLLR 359

Query: 2681 SRPEEVNTVALKHMCSYKHPMYDAFKALELVQKWLLNNPKLLERPREMNDIVEVRRLIIT 2502
               E VN  ALKH+ SYK P+ DA + L  VQKWL NNP LLER  +++D+VEVRRL+IT
Sbjct: 360  KHQEGVNLAALKHIFSYKRPVNDAIRKLASVQKWLFNNPNLLERTGQLDDVVEVRRLVIT 419

Query: 2501 PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMMTLNKNVLTYYVGPMARGITSN 2322
            P KAYCLPP VELSNRVLR Y++I+DRFLRVTFMDE M  LN+N LTYY   + R ITS+
Sbjct: 420  PTKAYCLPPTVELSNRVLRKYKHISDRFLRVTFMDEGMRNLNRNALTYYAANIVREITSS 479

Query: 2321 SNPQRTTMFKRVKDILNNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNTGVANIKNWM 2142
            SNPQRT +F+RVK I+N GFYLCGR+YSFLAFS+NQLRDRSAWFFAE     V +I NWM
Sbjct: 480  SNPQRTGIFQRVKIIVNKGFYLCGRRYSFLAFSANQLRDRSAWFFAETPEIRVTSIINWM 539

Query: 2141 GKFTNRNIAKCAARMGQCFSSTYATVEVPSTQVNSKLPDIERNGYVFSDGIGMMSVSLAV 1962
            GKF NRN+AKCAARMGQCFSSTYATVEV  ++VNS+LPDIERNGYVFSDGIGMMSV L++
Sbjct: 540  GKFGNRNVAKCAARMGQCFSSTYATVEVLPSEVNSELPDIERNGYVFSDGIGMMSVDLSI 599

Query: 1961 EVAEKLQISTDPPCAYQIRYAGYKGVIARWPNIKDGTHLHLRTSMRKFESNHTILEICSW 1782
            EVAEKLQ+S +PPCAYQIRYAG KGV+A WP  KDG  L LR SM+KF+SNHTILEICSW
Sbjct: 600  EVAEKLQLSVNPPCAYQIRYAGCKGVVACWPAEKDGIRLSLRPSMKKFDSNHTILEICSW 659

Query: 1781 TRFQPGFLNRQIVTLLSALEVEDGIFWRMQETMVSRLDRMLEDTDMAFDVVTGSCTDQGS 1602
            TR QPGFLNRQI+TLLS+LEV+D +FW MQ+ M+S+LD++L D+D+AFDV+T SC + G+
Sbjct: 660  TRLQPGFLNRQIITLLSSLEVKDEMFWEMQKEMLSKLDKILVDSDVAFDVITASCAEAGN 719

Query: 1601 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQLGDLREKARIFVPSGRWLMGCLDELGVLEHG 1422
            TAAIMLSAGFKPQ+EPHLRGML SIRAAQLGDLR KAR+FV SGRWLMGCLDELG LE G
Sbjct: 720  TAAIMLSAGFKPQSEPHLRGMLASIRAAQLGDLRNKARMFVTSGRWLMGCLDELGELEQG 779

Query: 1421 QCFIQVSIPSLEESFVKHGSRFSENEKKLQVVKGLVAIAKNPCLHPGDVRILEAVDAPEL 1242
            QCFIQVS PSLE  FVKHG  FSE +K LQV+KGLV IAKNPCLHPGDVRILEAVD P L
Sbjct: 780  QCFIQVSSPSLETCFVKHGPEFSEIKKNLQVIKGLVVIAKNPCLHPGDVRILEAVDVPGL 839

Query: 1241 HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMDYAAGEAREL 1062
            HHL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSK+SW+PM YA  EA++L
Sbjct: 840  HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMAYAPAEAKQL 899

Query: 1061 PRDVRHSDIIEFFTKNMVNESLGTICNAHVVHADLSDYGALDEKCIKLAELAAIAVDFPK 882
             R V+H+DII+FF KNMV ESLG ICNAHVVHADLS++GA+DEKC+KLAELAA+AVDFPK
Sbjct: 900  GRQVQHTDIIDFFLKNMVQESLGEICNAHVVHADLSEFGAMDEKCLKLAELAALAVDFPK 959

Query: 881  TGKIVTMPPELKPKLYPDFMGKEELQTYHSNKILGKLYRKIKDANDRGYEESSEQTFALE 702
            TGK+VTMP +LKPK+YPDFMGKE  Q+Y S K+LGKLYR++ D  D    ESS   +  +
Sbjct: 960  TGKLVTMPYDLKPKMYPDFMGKEPFQSYESKKVLGKLYRQVIDVYDAEGGESSGLEYVPK 1019

Query: 701  NITYDQDLEITGSKSFIADAWNCKCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSK 522
            +I YD +LEI G + FI DAWN KCSYDGQL GLLGQYKVN EEE+VTGHIWSMPKYS+K
Sbjct: 1020 DIPYDTNLEIPGYEDFIDDAWNHKCSYDGQLNGLLGQYKVNGEEEVVTGHIWSMPKYSAK 1079

Query: 521  KQGELKERLKHAYSTLRKEFRKVFESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWL 342
            KQGELKERLKHAY+ LRKEFR VFE M+P+FD L  DEKN MYE+KASAWY+VTYH  W+
Sbjct: 1080 KQGELKERLKHAYNMLRKEFRNVFEQMEPDFDLLPIDEKNDMYERKASAWYRVTYHPHWV 1139

Query: 341  KKSKELQMVDDAGKTVMLSFAWIAADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 168
             +S ELQ+ D     VMLSFAWIAADY+ARIKIR+R  +N  STKPIDSLGRYL +KI
Sbjct: 1140 TRSLELQLPDAVSNGVMLSFAWIAADYIARIKIRQRGMQNYDSTKPIDSLGRYLVNKI 1197