BLASTX nr result
ID: Rehmannia31_contig00001206
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00001206
(794 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIM98902.1| hypothetical protein CDL12_28609 [Handroanthus im... 77 8e-17
ref|XP_006347459.1| PREDICTED: general transcription factor IIH ... 77 1e-16
ref|XP_004241513.1| PREDICTED: RNA polymerase II transcription f... 77 1e-16
gb|PHU15424.1| hypothetical protein BC332_16629 [Capsicum chinense] 77 1e-16
gb|PHT46298.1| hypothetical protein CQW23_15456 [Capsicum baccatum] 77 1e-16
ref|XP_011101336.1| RNA polymerase II transcription factor B sub... 76 2e-16
ref|XP_019247850.1| PREDICTED: RNA polymerase II transcription f... 76 2e-16
ref|XP_019250007.1| PREDICTED: RNA polymerase II transcription f... 76 2e-16
ref|XP_019247851.1| PREDICTED: RNA polymerase II transcription f... 76 2e-16
ref|XP_009776618.1| PREDICTED: general transcription factor IIH ... 76 2e-16
ref|XP_016507557.1| PREDICTED: RNA polymerase II transcription f... 76 2e-16
ref|XP_009626298.1| PREDICTED: RNA polymerase II transcription f... 76 2e-16
ref|XP_019247852.1| PREDICTED: RNA polymerase II transcription f... 76 2e-16
ref|XP_019250014.1| PREDICTED: RNA polymerase II transcription f... 76 2e-16
ref|XP_016441296.1| PREDICTED: RNA polymerase II transcription f... 76 2e-16
ref|XP_016441297.1| PREDICTED: RNA polymerase II transcription f... 76 2e-16
ref|XP_016441298.1| PREDICTED: RNA polymerase II transcription f... 76 2e-16
ref|XP_016578295.1| PREDICTED: RNA polymerase II transcription f... 75 3e-16
ref|XP_015080104.1| PREDICTED: general transcription factor IIH ... 75 3e-16
ref|XP_016578296.1| PREDICTED: RNA polymerase II transcription f... 75 3e-16
>gb|PIM98902.1| hypothetical protein CDL12_28609 [Handroanthus impetiginosus]
Length = 172
Score = 77.4 bits (189), Expect(2) = 8e-17
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 33 QYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 71
Score = 38.5 bits (88), Expect(2) = 8e-17
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 20 RILCLHGSPDGPGQYV 35
>ref|XP_006347459.1| PREDICTED: general transcription factor IIH subunit 3 [Solanum
tuberosum]
Length = 290
Score = 77.0 bits (188), Expect(2) = 1e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 153 QYVAVMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 191
Score = 38.5 bits (88), Expect(2) = 1e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 140 RILCLHGSPDGPGQYV 155
>ref|XP_004241513.1| PREDICTED: RNA polymerase II transcription factor B subunit 4
[Solanum lycopersicum]
Length = 290
Score = 77.0 bits (188), Expect(2) = 1e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 153 QYVAVMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 191
Score = 38.5 bits (88), Expect(2) = 1e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 140 RILCLHGSPDGPGQYV 155
>gb|PHU15424.1| hypothetical protein BC332_16629 [Capsicum chinense]
Length = 286
Score = 77.0 bits (188), Expect(2) = 1e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 154 QYVAVMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 192
Score = 38.5 bits (88), Expect(2) = 1e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 141 RILCLHGSPDGPGQYV 156
>gb|PHT46298.1| hypothetical protein CQW23_15456 [Capsicum baccatum]
Length = 286
Score = 77.0 bits (188), Expect(2) = 1e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 154 QYVAVMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 192
Score = 38.5 bits (88), Expect(2) = 1e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 141 RILCLHGSPDGPGQYV 156
>ref|XP_011101336.1| RNA polymerase II transcription factor B subunit 4 [Sesamum
indicum]
ref|XP_011101337.1| RNA polymerase II transcription factor B subunit 4 [Sesamum
indicum]
Length = 292
Score = 76.3 bits (186), Expect(2) = 2e-16
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVAIMNSIFSAQRSMVPIDSCVIG+QHSAFLQQASYIT
Sbjct: 154 QYVAIMNSIFSAQRSMVPIDSCVIGAQHSAFLQQASYIT 192
Score = 38.5 bits (88), Expect(2) = 2e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 141 RILCLHGSPDGPGQYV 156
>ref|XP_019247850.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
isoform X1 [Nicotiana attenuata]
Length = 292
Score = 75.9 bits (185), Expect(2) = 2e-16
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MN+IFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 153 QYVAVMNAIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 191
Score = 38.5 bits (88), Expect(2) = 2e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 140 RILCLHGSPDGPGQYV 155
>ref|XP_019250007.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
isoform X1 [Nicotiana attenuata]
gb|OIT08372.1| rna polymerase ii transcription factor b subunit 4 [Nicotiana
attenuata]
Length = 291
Score = 75.9 bits (185), Expect(2) = 2e-16
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MN+IFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 153 QYVAVMNAIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 191
Score = 38.5 bits (88), Expect(2) = 2e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 140 RILCLHGSPDGPGQYV 155
>ref|XP_019247851.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
isoform X2 [Nicotiana attenuata]
gb|OIT02542.1| rna polymerase ii transcription factor b subunit 4 [Nicotiana
attenuata]
Length = 291
Score = 75.9 bits (185), Expect(2) = 2e-16
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MN+IFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 153 QYVAVMNAIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 191
Score = 38.5 bits (88), Expect(2) = 2e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 140 RILCLHGSPDGPGQYV 155
>ref|XP_009776618.1| PREDICTED: general transcription factor IIH subunit 3 [Nicotiana
sylvestris]
ref|XP_016486790.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
[Nicotiana tabacum]
Length = 291
Score = 75.9 bits (185), Expect(2) = 2e-16
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MN+IFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 153 QYVAVMNAIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 191
Score = 38.5 bits (88), Expect(2) = 2e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 140 RILCLHGSPDGPGQYV 155
>ref|XP_016507557.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
isoform X2 [Nicotiana tabacum]
Length = 290
Score = 75.9 bits (185), Expect(2) = 2e-16
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MN+IFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 152 QYVAVMNAIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 190
Score = 38.5 bits (88), Expect(2) = 2e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 139 RILCLHGSPDGPGQYV 154
>ref|XP_009626298.1| PREDICTED: RNA polymerase II transcription factor B subunit 4
[Nicotiana tomentosiformis]
ref|XP_018633374.1| PREDICTED: RNA polymerase II transcription factor B subunit 4
[Nicotiana tomentosiformis]
Length = 288
Score = 75.9 bits (185), Expect(2) = 2e-16
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MN+IFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 152 QYVAVMNAIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 190
Score = 38.5 bits (88), Expect(2) = 2e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 139 RILCLHGSPDGPGQYV 154
>ref|XP_019247852.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
isoform X3 [Nicotiana attenuata]
Length = 276
Score = 75.9 bits (185), Expect(2) = 2e-16
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MN+IFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 137 QYVAVMNAIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 175
Score = 38.5 bits (88), Expect(2) = 2e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 124 RILCLHGSPDGPGQYV 139
>ref|XP_019250014.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
isoform X2 [Nicotiana attenuata]
Length = 275
Score = 75.9 bits (185), Expect(2) = 2e-16
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MN+IFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 137 QYVAVMNAIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 175
Score = 38.5 bits (88), Expect(2) = 2e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 124 RILCLHGSPDGPGQYV 139
>ref|XP_016441296.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
isoform X1 [Nicotiana tabacum]
Length = 243
Score = 75.9 bits (185), Expect(2) = 2e-16
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MN+IFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 153 QYVAVMNAIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 191
Score = 38.5 bits (88), Expect(2) = 2e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 140 RILCLHGSPDGPGQYV 155
>ref|XP_016441297.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
isoform X2 [Nicotiana tabacum]
Length = 220
Score = 75.9 bits (185), Expect(2) = 2e-16
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MN+IFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 153 QYVAVMNAIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 191
Score = 38.5 bits (88), Expect(2) = 2e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 140 RILCLHGSPDGPGQYV 155
>ref|XP_016441298.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
isoform X3 [Nicotiana tabacum]
Length = 218
Score = 75.9 bits (185), Expect(2) = 2e-16
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MN+IFSAQRSMVPIDSCVIGSQHSAFLQQASYIT
Sbjct: 153 QYVAVMNAIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 191
Score = 38.5 bits (88), Expect(2) = 2e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 140 RILCLHGSPDGPGQYV 155
>ref|XP_016578295.1| PREDICTED: RNA polymerase II transcription factor B subunit 4
isoform X1 [Capsicum annuum]
Length = 314
Score = 75.5 bits (184), Expect(2) = 3e-16
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MNSIFSAQRSMVPIDSC IGSQHSAFLQQASYIT
Sbjct: 154 QYVAVMNSIFSAQRSMVPIDSCAIGSQHSAFLQQASYIT 192
Score = 38.5 bits (88), Expect(2) = 3e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 141 RILCLHGSPDGPGQYV 156
>ref|XP_015080104.1| PREDICTED: general transcription factor IIH subunit 3 [Solanum
pennellii]
Length = 290
Score = 75.5 bits (184), Expect(2) = 3e-16
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYI+
Sbjct: 153 QYVAVMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIS 191
Score = 38.5 bits (88), Expect(2) = 3e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 140 RILCLHGSPDGPGQYV 155
>ref|XP_016578296.1| PREDICTED: RNA polymerase II transcription factor B subunit 4
isoform X2 [Capsicum annuum]
gb|PHT79714.1| hypothetical protein T459_17766 [Capsicum annuum]
Length = 286
Score = 75.5 bits (184), Expect(2) = 3e-16
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +3
Query: 678 RYVAIMNSIFSAQRSMVPIDSCVIGSQHSAFLQQASYIT 794
+YVA+MNSIFSAQRSMVPIDSC IGSQHSAFLQQASYIT
Sbjct: 154 QYVAVMNSIFSAQRSMVPIDSCAIGSQHSAFLQQASYIT 192
Score = 38.5 bits (88), Expect(2) = 3e-16
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 559 QILCLHGSPDGPGQYV 606
+ILCLHGSPDGPGQYV
Sbjct: 141 RILCLHGSPDGPGQYV 156