BLASTX nr result
ID: Rehmannia31_contig00001074
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00001074
(909 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KZV56018.1| hypothetical protein F511_12717 [Dorcoceras hygro... 415 e-143
ref|XP_020247843.1| F-box/LRR-repeat protein 20-like [Asparagus ... 370 e-121
gb|KZV43791.1| hypothetical protein F511_41481 [Dorcoceras hygro... 262 3e-83
gb|PNX61902.1| retrovirus-related Pol polyprotein from transposo... 247 1e-77
ref|XP_024038695.1| LOW QUALITY PROTEIN: DNA (cytosine-5)-methyl... 266 2e-77
gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposo... 249 3e-77
gb|KYP72642.1| Retrovirus-related Pol polyprotein from transposo... 246 4e-77
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024... 265 8e-77
gb|KOM47916.1| hypothetical protein LR48_Vigan07g162000 [Vigna a... 242 2e-76
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo... 249 6e-76
gb|KYP69326.1| Retrovirus-related Pol polyprotein from transposo... 245 1e-75
gb|PON48831.1| hypothetical protein PanWU01x14_235340 [Parasponi... 239 3e-75
gb|PNX69499.1| retrovirus-related Pol polyprotein from transposo... 239 3e-75
gb|PNX85388.1| retrovirus-related Pol polyprotein from transposo... 243 1e-74
emb|CAH66031.1| H0515C11.7 [Oryza sativa] 239 1e-74
gb|KYP63307.1| Retrovirus-related Pol polyprotein from transposo... 240 2e-74
gb|KYP68590.1| Retrovirus-related Pol polyprotein from transposo... 245 5e-74
gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinen... 244 8e-74
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 238 9e-74
gb|KYP72919.1| Retrovirus-related Pol polyprotein from transposo... 249 7e-73
>gb|KZV56018.1| hypothetical protein F511_12717 [Dorcoceras hygrometricum]
Length = 313
Score = 415 bits (1066), Expect = e-143
Identities = 193/228 (84%), Positives = 214/228 (93%)
Frame = +3
Query: 3 NVMKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLN 182
N M+NVPYSNAIGSVMY+MVSTRPDIAYSVSCLSRYM+NPG++HWNAVKWLLRYLKHSLN
Sbjct: 86 NSMRNVPYSNAIGSVMYMMVSTRPDIAYSVSCLSRYMANPGVVHWNAVKWLLRYLKHSLN 145
Query: 183 YSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTE 362
Y L F+KC GV+L GYVDSNYAND+DNRKSTTSYVFTLCG+CVSWKSQLQH+VALSTTE
Sbjct: 146 YGLMFSKCDKGVELTGYVDSNYANDKDNRKSTTSYVFTLCGACVSWKSQLQHIVALSTTE 205
Query: 363 SEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFH 542
SEYIA+TEAFKEA+WLKGL++E+ L G V VFSDSQSGIQLCKNPVFHDRTKHIDVRFH
Sbjct: 206 SEYIAITEAFKEALWLKGLLNEISMLTGKVTVFSDSQSGIQLCKNPVFHDRTKHIDVRFH 265
Query: 543 YIRDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTCLKILNFDTGD 686
+IRDIV+KGL+ LEKIPSE+NPADMGTKCLPVSKF++CLKIL FDT D
Sbjct: 266 FIRDIVSKGLIFLEKIPSEYNPADMGTKCLPVSKFMSCLKILKFDTCD 313
>ref|XP_020247843.1| F-box/LRR-repeat protein 20-like [Asparagus officinalis]
Length = 602
Score = 370 bits (950), Expect = e-121
Identities = 176/211 (83%), Positives = 191/211 (90%)
Frame = +3
Query: 3 NVMKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLN 182
N MK VPYSNAIGS+MYLMVSTRPDIAY+VSCLSRYMSNPG+ HWN +KWLLRYLK S++
Sbjct: 30 NDMKKVPYSNAIGSIMYLMVSTRPDIAYAVSCLSRYMSNPGMSHWNVLKWLLRYLKSSVD 89
Query: 183 YSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTE 362
L F+KC +GVKL GYVDSNYANDRDNRKSTTSYVFTLCGSC+SWKSQLQ +VALSTTE
Sbjct: 90 VGLTFSKCSEGVKLAGYVDSNYANDRDNRKSTTSYVFTLCGSCISWKSQLQPIVALSTTE 149
Query: 363 SEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFH 542
SEY+A TEAFKEAIWL+GLISE+GFLD NVVVFSDSQS IQLCKNPVFHDRTKHIDVRFH
Sbjct: 150 SEYVAATEAFKEAIWLRGLISEIGFLDKNVVVFSDSQSAIQLCKNPVFHDRTKHIDVRFH 209
Query: 543 YIRDIVAKGLVNLEKIPSEFNPADMGTKCLP 635
YIRDIV KG+V LEKIPSEFNPADM + P
Sbjct: 210 YIRDIVEKGIVKLEKIPSEFNPADMDARAPP 240
>gb|KZV43791.1| hypothetical protein F511_41481 [Dorcoceras hygrometricum]
Length = 300
Score = 262 bits (669), Expect = 3e-83
Identities = 129/224 (57%), Positives = 168/224 (75%), Gaps = 1/224 (0%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
MK+VPY+N +GSVMY M+ TRPD+A++VS +SR+M+NPG HW A+KW++RYLK + N
Sbjct: 72 MKSVPYANVVGSVMYAMICTRPDLAHAVSVVSRFMANPGKCHWQALKWMMRYLKGTQNLG 131
Query: 189 LKFAKCKDGVK-LKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTES 365
L + + G + + GYVDS+YA D R+S T YVFT+ G+ VSWK+ LQ VVALSTTE+
Sbjct: 132 LVYGGNQTGGEAVLGYVDSDYAGSIDTRRSLTGYVFTVYGTAVSWKANLQSVVALSTTEA 191
Query: 366 EYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHY 545
EYIAVTEA KEA+WLKGL SEL D +V+ DSQS I L KN VFH+RTKHIDV+ H+
Sbjct: 192 EYIAVTEAVKEALWLKGLASELKLQDDTLVLLCDSQSAIHLTKNQVFHERTKHIDVKLHF 251
Query: 546 IRDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTCLKILNFD 677
+R++VA G V +EK+ +E N ADM TK LP +KF CLK+L +
Sbjct: 252 VREVVAGGEVVIEKVSTEENAADMITKVLPSNKFHHCLKLLRIN 295
>gb|PNX61902.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 275
Score = 247 bits (630), Expect = 1e-77
Identities = 118/226 (52%), Positives = 166/226 (73%), Gaps = 3/226 (1%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
M++ PY++ +GS+MY MV +RPD++Y++S +SR+M+NPG +HW A+KW+LRYL SL
Sbjct: 51 MESTPYASGVGSIMYGMVCSRPDLSYAISVVSRFMANPGQVHWQALKWVLRYLNGSLKGG 110
Query: 189 LKFAKC---KDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTT 359
L++ K KD L+GYVD++YA + D RKS + +VFTL G+ V+WK+ Q VVALSTT
Sbjct: 111 LRYKKIDPRKDA--LEGYVDADYAGNVDTRKSLSGFVFTLFGTAVTWKANQQSVVALSTT 168
Query: 360 ESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRF 539
++EYIA+ E KEAIWLKG+I ELG G V + DSQS I L + V+H+RTKHID+R
Sbjct: 169 QAEYIALVEGVKEAIWLKGMIGELGIGQGCVKIHCDSQSAIHLANHQVYHERTKHIDIRL 228
Query: 540 HYIRDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTCLKILNFD 677
H++RD++ + +EK+ SE NPADM TK LP S+F CL ++NF+
Sbjct: 229 HFVRDMIETKEIIVEKVASEENPADMFTKSLPRSRFKHCLDLINFE 274
>ref|XP_024038695.1| LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1-like
[Citrus clementina]
Length = 2164
Score = 266 bits (681), Expect = 2e-77
Identities = 128/223 (57%), Positives = 169/223 (75%), Gaps = 1/223 (0%)
Frame = +3
Query: 3 NVMKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLN 182
N M+ +PYS+A+GS+MY MV TRPD+A++V +SR++ NPG HWNAVKW+LRYL+ +
Sbjct: 830 NYMREIPYSSAVGSIMYAMVCTRPDMAHAVGVISRFIGNPGKDHWNAVKWVLRYLRGTAV 889
Query: 183 YSLKFAKCKDGV-KLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTT 359
++ F K ++ G+VDS+YA D+D R+S T +VFT+CG +SWKS LQ VVALSTT
Sbjct: 890 TAIMFGKISGASPEVAGFVDSDYAADKDRRRSITCFVFTICGGAISWKSFLQSVVALSTT 949
Query: 360 ESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRF 539
E+EYIA+TE KEAIWL+GL+SELGF V+V DS S IQL KNP +H+RTKHIDVR
Sbjct: 950 EAEYIALTEVVKEAIWLRGLVSELGFKQEVVIVGCDSLSDIQLSKNPKYHERTKHIDVRM 1009
Query: 540 HYIRDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 668
H+IRD ++KG+VN+ K+PSE NPADM TK LP +F L ++
Sbjct: 1010 HFIRDEISKGVVNVAKVPSEVNPADMLTKPLPSVRFRDLLNLI 1052
>gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 394
Score = 249 bits (637), Expect = 3e-77
Identities = 120/221 (54%), Positives = 159/221 (71%), Gaps = 1/221 (0%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
M +VPY++A+GS+MY MV TRPD+AY+VS +SRYM NPG HW+AVKW+ RYLK + N
Sbjct: 169 MSHVPYASAVGSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIG 228
Query: 189 LKFAKCKDGVK-LKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTES 365
L F + K + G+VDS+Y D D R+S + Y+FTLC S +SWK+ LQ + ALSTTE+
Sbjct: 229 LVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQSIAALSTTEA 288
Query: 366 EYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHY 545
EY++ TE KEA+W++GL+ ELG + VF DSQS I L KN +HD+TKHIDV+ H+
Sbjct: 289 EYVSATEGVKEALWIRGLVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDKTKHIDVKHHF 348
Query: 546 IRDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 668
IRDIV G V L+K+ + NPADM TK LP +KF CL ++
Sbjct: 349 IRDIVTIGEVLLQKVHTSENPADMLTKPLPNAKFQHCLGLV 389
>gb|KYP72642.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 296
Score = 246 bits (628), Expect = 4e-77
Identities = 118/225 (52%), Positives = 162/225 (72%), Gaps = 1/225 (0%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
M++VPY++ +GSVMY MV RPD+AY++S +SR+M+NPG +HWNA+KWL RYL +L
Sbjct: 72 MESVPYASGVGSVMYGMVCCRPDLAYAISLVSRFMANPGQLHWNALKWLFRYLNGTLGCG 131
Query: 189 LKFAKCK-DGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTES 365
L+F + +G + GYVD+++A D RKS T YVFT+ GS V+WK+ LQ VV+LSTTE+
Sbjct: 132 LRFKRSHTEGDAVIGYVDADFAGCLDTRKSLTGYVFTMFGSAVTWKANLQSVVSLSTTEA 191
Query: 366 EYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHY 545
EYIA+TE KE WLKGLI +LG V + DSQS I L + +H+RTKHID+R+H+
Sbjct: 192 EYIALTEGAKEGSWLKGLIGDLGINQSRVTINCDSQSAIHLANHHTYHERTKHIDIRYHF 251
Query: 546 IRDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTCLKILNFDT 680
IRD++ + + KI +E NPADM TK LP +KF CL ++NF +
Sbjct: 252 IRDMIETRKIQVLKIATEDNPADMLTKSLPRAKFKHCLDLINFSS 296
>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
Length = 1892
Score = 265 bits (677), Expect = 8e-77
Identities = 129/216 (59%), Positives = 163/216 (75%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
M VPY++A+GS+MY MV TRPDIA SVS +S+YM+NPG HW AVKW+LRYLK + +
Sbjct: 1672 MSKVPYASAVGSIMYAMVCTRPDIAQSVSVVSKYMANPGKRHWEAVKWILRYLKGAPDVG 1731
Query: 189 LKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTESE 368
L F K +G+ + GYVDS+YA D D R+STT Y+FTL GS VSWKS LQ +VALSTTE+E
Sbjct: 1732 LTFRK-SEGISILGYVDSDYAGDLDRRRSTTGYIFTLVGSAVSWKSTLQSIVALSTTEAE 1790
Query: 369 YIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYI 548
Y+A TEA KEAIWLKGL++EL ++ DSQS I L KN FH+RTKHIDVRFH+I
Sbjct: 1791 YMAATEAVKEAIWLKGLVAELSSAQLKSILKCDSQSAIHLIKNQRFHERTKHIDVRFHFI 1850
Query: 549 RDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTC 656
RD+V KG + +EK+ ++ N ADM TK +P++KF C
Sbjct: 1851 RDVVEKGAIKVEKVITDDNAADMLTKIVPLAKFAHC 1886
>gb|KOM47916.1| hypothetical protein LR48_Vigan07g162000 [Vigna angularis]
Length = 222
Score = 242 bits (617), Expect = 2e-76
Identities = 117/216 (54%), Positives = 157/216 (72%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
M +PY++AIGS+MY MV TRPDI Y+V +SR+MSNPG HW AVKW+LRYL+ +
Sbjct: 1 MAKIPYASAIGSLMYAMVCTRPDIGYAVGVVSRFMSNPGKAHWEAVKWILRYLRKTKEKC 60
Query: 189 LKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTESE 368
L F+K + +K++GYVD+++A + D R+STT Y+FT+ + VSW SQ+Q +VALSTTE+E
Sbjct: 61 LCFSKGE--LKVQGYVDADFAGEIDYRRSTTGYIFTVGTTAVSWMSQIQKIVALSTTEAE 118
Query: 369 YIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYI 548
Y+AVTEA KE IWL+GL++ELGF+ V+ SDSQS I L KN FH RTKHID+R+H+I
Sbjct: 119 YVAVTEASKELIWLQGLLTELGFIQEKTVLHSDSQSAIHLAKNSTFHSRTKHIDLRYHFI 178
Query: 549 RDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTC 656
R ++ ++ L KI NPADM TK + K C
Sbjct: 179 RSLLEDEVLTLRKILGSKNPADMLTKVVTTEKLRLC 214
>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 249 bits (637), Expect = 6e-76
Identities = 120/221 (54%), Positives = 159/221 (71%), Gaps = 1/221 (0%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
M +VPY++A+GS+MY MV TRPD+AY+VS +SRYM NPG HW+AVKW+ RYLK + N
Sbjct: 278 MSHVPYASAVGSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIG 337
Query: 189 LKFAKCKDGVK-LKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTES 365
L F + K + G+VDS+Y D D R+S + Y+FTLC S +SWK+ LQ + ALSTTE+
Sbjct: 338 LVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQSIAALSTTEA 397
Query: 366 EYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHY 545
EY++ TE KEA+W++GL+ ELG + VF DSQS I L KN +HD+TKHIDV+ H+
Sbjct: 398 EYVSATEGVKEALWIRGLVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDKTKHIDVKHHF 457
Query: 546 IRDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 668
IRDIV G V L+K+ + NPADM TK LP +KF CL ++
Sbjct: 458 IRDIVTIGEVLLQKVHTSENPADMLTKPLPNAKFQHCLGLV 498
>gb|KYP69326.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 389
Score = 245 bits (626), Expect = 1e-75
Identities = 118/216 (54%), Positives = 158/216 (73%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
M VPY++AIGS+MY MV TRPDI ++V +SR+MSNPG HW AVKW+LRYL+ +
Sbjct: 168 MAKVPYASAIGSLMYAMVCTRPDIGHAVGVVSRFMSNPGKAHWEAVKWILRYLRGTTERC 227
Query: 189 LKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTESE 368
L F K K +K++GYVD++Y + D+R+STT Y+FT+ + VSW SQ+Q +VALSTTE+E
Sbjct: 228 LHFGKGK--IKVQGYVDADYGGEVDHRRSTTGYIFTVGTTAVSWMSQVQKIVALSTTEAE 285
Query: 369 YIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYI 548
Y+AVTEA KE IWL+GL++ELGF+ V+ SDSQS I L KN FH RTKHID+R+H+I
Sbjct: 286 YVAVTEASKELIWLQGLLTELGFIQEKSVLHSDSQSAIHLAKNSAFHSRTKHIDIRYHFI 345
Query: 549 RDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTC 656
R ++ ++ L+KI NPADM TK + + K C
Sbjct: 346 RSLLEDEVLTLKKILGSRNPADMLTKVVTIDKLKLC 381
>gb|PON48831.1| hypothetical protein PanWU01x14_235340 [Parasponia andersonii]
Length = 222
Score = 239 bits (609), Expect = 3e-75
Identities = 121/216 (56%), Positives = 150/216 (69%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
M VPYS+AIGS+MY MV TRPD+A++V +SRYMSNPG HW AVKW+LRYL + N S
Sbjct: 1 MAKVPYSSAIGSLMYAMVCTRPDVAHAVGVVSRYMSNPGKQHWKAVKWILRYLSGTSNMS 60
Query: 189 LKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTESE 368
L F K G L+ YVD++ A D D RKSTT YVFT + ++W S+LQ +VALSTTE+E
Sbjct: 61 LYFKKSDMG--LQSYVDADMAGDIDGRKSTTGYVFTFGSTTITWVSKLQKIVALSTTEAE 118
Query: 369 YIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYI 548
Y+AVTEA KE IWL+ + EL G + DSQS I L KNPV+H RTKHI VR+H+I
Sbjct: 119 YVAVTEASKELIWLQSFLEELSQNYGKSTLHCDSQSAIHLAKNPVYHARTKHIQVRYHFI 178
Query: 549 RDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTC 656
R + G++ LEKIP NPADM TK + + K C
Sbjct: 179 RSALEDGVLVLEKIPGSKNPADMLTKTVTIDKLKLC 214
>gb|PNX69499.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 227
Score = 239 bits (609), Expect = 3e-75
Identities = 118/221 (53%), Positives = 159/221 (71%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
M++VPY++A+GS+MY MV TR DI+ +VS +SR+M+NPG HW AVKW+LRYLK +++
Sbjct: 1 MEHVPYASAVGSLMYAMVCTRSDISQAVSVVSRFMANPGKTHWEAVKWILRYLKGTIDTC 60
Query: 189 LKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTESE 368
L F D + G+VDS+YA D D R+STT YVF + G VSW+S LQ VALSTTE+E
Sbjct: 61 LCFGG--DACHINGFVDSDYAGDLDRRRSTTGYVFQIHGVPVSWRSMLQSTVALSTTEAE 118
Query: 369 YIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYI 548
Y+AV E KEA+WL+GL+ +LG V + DSQS + L KN V H RTKHIDVR+H++
Sbjct: 119 YMAVAEGVKEALWLRGLLDDLGMKQECVKLSCDSQSALHLAKNQVHHARTKHIDVRYHFV 178
Query: 549 RDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTCLKILN 671
RD+V +G ++L K+ ++ N ADM TK + SKF CL +LN
Sbjct: 179 RDVVEEGNISLTKVHTDENSADMLTKVVSGSKFQHCLNLLN 219
>gb|PNX85388.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 377
Score = 243 bits (619), Expect = 1e-74
Identities = 115/216 (53%), Positives = 159/216 (73%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
M N+PY++AIGS+MY M+ TRPDI ++V +SR+MSNPG HW AVKW+LRYL+ ++
Sbjct: 156 MANIPYASAIGSLMYAMICTRPDIGHAVXVVSRFMSNPGKAHWEAVKWILRYLRGTIEKC 215
Query: 189 LKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTESE 368
L F K + +K++GYVD+++A D D+R+STT Y+FT+ VSW S++Q +VALSTTE+E
Sbjct: 216 LYFVKGE--LKVQGYVDADFAGDVDHRRSTTGYIFTVGTGAVSWISRIQKIVALSTTEAE 273
Query: 369 YIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYI 548
Y+AVTEA KE IWL+GL++ELGF+ V++SDSQS I L KN FH RTKHI +R+H+I
Sbjct: 274 YVAVTEASKELIWLQGLLTELGFIQEKSVLYSDSQSAIHLAKNSAFHSRTKHIGLRYHFI 333
Query: 549 RDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTC 656
R ++ ++ L KI NPADM TK + + K C
Sbjct: 334 RSLLEDEVLTLSKIQGSENPADMLTKVVTIDKLKLC 369
>emb|CAH66031.1| H0515C11.7 [Oryza sativa]
Length = 293
Score = 239 bits (611), Expect = 1e-74
Identities = 114/220 (51%), Positives = 162/220 (73%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
M VPYS+A+GS+MY MV +RPD+++++S +SRYM+NPG HW A+ W+ RYL+ + +
Sbjct: 72 MSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMTNPGKEHWKAIHWIFRYLRGTTDAC 131
Query: 189 LKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTESE 368
LKF + G L GYVDS++A D D R+S T YVFT+ VSWK+ LQ +VA STTE+E
Sbjct: 132 LKFGRTDKG--LVGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQPIVAQSTTEAE 189
Query: 369 YIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYI 548
Y+A+ EA KE++WLKGL +EL +D + +F DSQS I L K+ +FH+RTKHID+++HY+
Sbjct: 190 YMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSAICLTKDQMFHERTKHIDIKYHYV 249
Query: 549 RDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 668
RD+VA+G + + KI + NPADM TK +PV+KF C ++
Sbjct: 250 RDVVAQGKLKVCKISTHDNPADMMTKPVPVAKFELCSSLV 289
>gb|KYP63307.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 322
Score = 240 bits (612), Expect = 2e-74
Identities = 119/228 (52%), Positives = 164/228 (71%), Gaps = 3/228 (1%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
M+ +PYS+AIGS+MY MV RPD+ Y++S +SR+M+NPG HW A+KW+LRYL + +
Sbjct: 95 MQRLPYSSAIGSIMYAMVCCRPDLTYAMSVISRFMANPGKPHWEAIKWVLRYLCGTTDVG 154
Query: 189 LKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTESE 368
LK+ +++G+VDS++A D RKS T YVF + G+ VSWK+ LQ VVALS+TE+E
Sbjct: 155 LKYISQGGVPEIEGFVDSDFAGSIDTRKSITGYVFKVFGNTVSWKANLQGVVALSSTEAE 214
Query: 369 YIAVTEAFKEAIWLKGLISE--LGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFH 542
Y+A EA KEA+WL+GL+SE LG ++ D+QS I L KN V H+RTKH+DV+FH
Sbjct: 215 YMAACEAVKEALWLRGLVSELLLGEELETTSIYCDNQSAICLTKNQVHHERTKHVDVKFH 274
Query: 543 YIRDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTCLKILNF-DTG 683
++RD+VA +V +EK+ +E N DM TK LP +KF CLK+LN DTG
Sbjct: 275 FVRDVVASDVVKIEKVATEENAVDMLTKALPSNKFEFCLKLLNVTDTG 322
>gb|KYP68590.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 523
Score = 245 bits (626), Expect = 5e-74
Identities = 118/216 (54%), Positives = 158/216 (73%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
M VPY++AIGS+MY MV TRPDI ++V +SR+MSNPG HW AVKW+LRYL+ +
Sbjct: 302 MAKVPYASAIGSLMYAMVCTRPDIGHAVGVVSRFMSNPGKAHWEAVKWILRYLRGTTERC 361
Query: 189 LKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTESE 368
L F K K +K++GYVD++Y + D+R+STT Y+FT+ + VSW SQ+Q +VALSTTE+E
Sbjct: 362 LHFGKGK--IKVQGYVDADYGGEVDHRRSTTGYIFTVGTTAVSWMSQVQKIVALSTTEAE 419
Query: 369 YIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYI 548
Y+AVTEA KE IWL+GL++ELGF+ V+ SDSQS I L KN FH RTKHID+R+H+I
Sbjct: 420 YVAVTEASKELIWLQGLLTELGFIQEKSVLHSDSQSAIHLAKNSAFHSRTKHIDIRYHFI 479
Query: 549 RDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTC 656
R ++ ++ L+KI NPADM TK + + K C
Sbjct: 480 RSLLEDEVLTLKKILGSRNPADMLTKVVTIDKLKLC 515
>gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 502
Score = 244 bits (623), Expect = 8e-74
Identities = 124/226 (54%), Positives = 158/226 (69%)
Frame = +3
Query: 3 NVMKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLN 182
+ MK+VPY++A+G +MY M+ TRPD+A ++S +S+YMSNPG HW AVKW+LRYLK +
Sbjct: 276 DAMKDVPYASAVGCLMYAMICTRPDLAQALSVVSKYMSNPGKPHWEAVKWILRYLKGTRQ 335
Query: 183 YSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTE 362
+ F + ++ + G+VD++YA D D R+STT YVFT G VSWKS LQ V ALSTTE
Sbjct: 336 LGIMFERKQEVACVAGFVDADYAGDLDKRRSTTGYVFTCGGGPVSWKSTLQAVTALSTTE 395
Query: 363 SEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFH 542
+EY+A+TEA KEAIWL GL SE G VVV DSQS I L KN VFH RTKHIDVR+H
Sbjct: 396 AEYMALTEASKEAIWLNGLASEFGIHQEGVVVKCDSQSAIHLAKNQVFHARTKHIDVRYH 455
Query: 543 YIRDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTCLKILNFDT 680
IRD V G + +EK+ + N AD TK + V KF CL +L+ T
Sbjct: 456 RIRDWVESGNIIVEKVHTNDNAADCLTKPVAVEKFKHCLNLLSVTT 501
>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 238 bits (606), Expect = 9e-74
Identities = 119/220 (54%), Positives = 158/220 (71%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
M VPY++ +GS++Y MV TRPDI+ +VS +SRYM NPG W AVKW+LRYL +++
Sbjct: 73 MACVPYASVVGSLIYAMVCTRPDISQAVSMVSRYMHNPGKSQWLAVKWILRYLYGTVDVG 132
Query: 189 LKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTESE 368
L F K G + GY DS++A D D ++ST+ YVFTL G VSW+S LQ +ALSTTE+E
Sbjct: 133 LLFKK-NCGQQCVGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAE 191
Query: 369 YIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYI 548
YIA TEA KEAIWLKGL+ +LG + N+ VF D+QS I L KN +H RTKHIDV++HY+
Sbjct: 192 YIAATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQTYHARTKHIDVKYHYV 251
Query: 549 RDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 668
R+I+ G V L+KI ++ NP+DM TK + KF CLK++
Sbjct: 252 REIIEGGDVLLKKIDTKDNPSDMLTKVVSEVKFQHCLKLI 291
>gb|KYP72919.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 865
Score = 249 bits (637), Expect = 7e-73
Identities = 120/221 (54%), Positives = 159/221 (71%), Gaps = 1/221 (0%)
Frame = +3
Query: 9 MKNVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGIIHWNAVKWLLRYLKHSLNYS 188
M +VPY++A+GS+MY MV TRPD+AY+VS +SRYM NPG HW+AVKW+ RYLK + N
Sbjct: 640 MSHVPYASAVGSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIG 699
Query: 189 LKFAKCKDGVK-LKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTES 365
L F + K + G+VDS+Y D D R+S + Y+FTLC S +SWK+ LQ + ALSTTE+
Sbjct: 700 LVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQSIAALSTTEA 759
Query: 366 EYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHY 545
EY++ TE KEA+W++GL+ ELG + VF DSQS I L KN +HD+TKHIDV+ H+
Sbjct: 760 EYVSATEGVKEALWIRGLVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDKTKHIDVKHHF 819
Query: 546 IRDIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 668
IRDIV G V L+K+ + NPADM TK LP +KF CL ++
Sbjct: 820 IRDIVTIGEVLLQKVHTSENPADMLTKPLPNAKFQHCLGLV 860