BLASTX nr result

ID: Rehmannia31_contig00000661 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00000661
         (521 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC11063.1| photosystem I reaction center subunit iv b, parti...    54   2e-06

>gb|AEC11063.1| photosystem I reaction center subunit iv b, partial (chloroplast)
           [Camellia sinensis]
          Length = 99

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = -1

Query: 521 VRFNKVNYANVSTNNYALDEVELVA*AMFICI 426
           VRFNKVNYANVSTNNYALDE+E V   ++IC+
Sbjct: 62  VRFNKVNYANVSTNNYALDEIEEVKRILYICV 93