BLASTX nr result

ID: Rehmannia31_contig00000493 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00000493
         (542 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011088833.1| pentatricopeptide repeat-containing protein ...    64   1e-08

>ref|XP_011088833.1| pentatricopeptide repeat-containing protein At5g25630 [Sesamum
           indicum]
 ref|XP_020549790.1| pentatricopeptide repeat-containing protein At5g25630 [Sesamum
           indicum]
          Length = 625

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/52 (67%), Positives = 38/52 (73%), Gaps = 5/52 (9%)
 Frame = -1

Query: 542 RTVLREAEF-SSDGFCST----KTTCRFGERAPVVSRRHFQGQVCVSGQFAP 402
           R VLREAEF SS+   ST      TCRFGERAP+VSRRHF  Q+CVSG FAP
Sbjct: 566 RMVLREAEFPSSESLRSTTKAMNLTCRFGERAPMVSRRHFHAQLCVSGPFAP 617


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