BLASTX nr result
ID: Rehmannia31_contig00000272
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00000272
(429 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020883188.1| glycine-rich RNA-binding protein 7 isoform X... 97 1e-22
ref|XP_013600156.1| PREDICTED: glycine-rich RNA-binding protein ... 95 3e-22
ref|XP_009117376.1| PREDICTED: glycine-rich RNA-binding protein ... 95 3e-22
ref|XP_013711806.1| glycine-rich RNA-binding protein GRP1A-like ... 94 9e-22
gb|EPS70351.1| hypothetical protein M569_04412, partial [Genlise... 92 1e-21
gb|ESQ46074.1| hypothetical protein EUTSA_v10000386mg [Eutrema s... 92 2e-21
gb|ALN22029.1| glycine-rich RNA binding protein 7b [Camelina sat... 92 2e-21
ref|XP_010416924.2| PREDICTED: glycine-rich RNA-binding protein ... 94 3e-21
gb|AGO21482.1| glycine-rich RNA binding protein 7a [Camelina sat... 92 3e-21
ref|XP_024013877.1| glycine-rich RNA-binding protein 7 isoform X... 92 7e-21
ref|XP_009140299.1| PREDICTED: glycine-rich RNA-binding protein ... 92 7e-21
gb|PIN06240.1| Nuclear cap-binding protein complex, subunit CBP2... 92 7e-21
ref|XP_013743542.1| glycine-rich RNA-binding protein GRP2A [Bras... 92 7e-21
ref|XP_013631377.1| PREDICTED: glycine-rich RNA-binding protein ... 92 7e-21
emb|CDY15876.1| BnaA04g12350D [Brassica napus] 92 7e-21
gb|EPS66737.1| hypothetical protein M569_08040 [Genlisea aurea] 92 7e-21
ref|XP_018477974.1| PREDICTED: glycine-rich RNA-binding protein ... 92 8e-21
emb|CDY72366.1| BnaUnng05060D [Brassica napus] 92 8e-21
gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidops... 92 8e-21
gb|EYU42616.1| hypothetical protein MIMGU_mgv1a016253mg [Erythra... 91 1e-20
>ref|XP_020883188.1| glycine-rich RNA-binding protein 7 isoform X1 [Arabidopsis lyrata
subsp. lyrata]
Length = 181
Score = 97.4 bits (241), Expect = 1e-22
Identities = 47/60 (78%), Positives = 54/60 (90%), Gaps = 2/60 (3%)
Frame = +2
Query: 134 FFCFRFLFL--QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
++C+ +LF IINDRETGRSRGFGFVTFKDE+SMK+AI+ MNGQELDGRSITVNEAQS
Sbjct: 32 YYCYCYLFFPKSIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQELDGRSITVNEAQS 91
>ref|XP_013600156.1| PREDICTED: glycine-rich RNA-binding protein GRP1A isoform X2
[Brassica oleracea var. oleracea]
Length = 141
Score = 95.1 bits (235), Expect = 3e-22
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +2
Query: 137 FCFRFLFLQIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+C+ + IINDRETGRSRGFGFVTFKDE+SMK+AI+ MNGQ+LDGRSITVNEAQS
Sbjct: 4 YCYFLILKSIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQS 60
>ref|XP_009117376.1| PREDICTED: glycine-rich RNA-binding protein GRP1A isoform X2
[Brassica rapa]
ref|XP_013660941.1| glycine-rich RNA-binding protein GRP1A isoform X2 [Brassica napus]
ref|XP_013707061.1| glycine-rich RNA-binding protein GRP1A isoform X2 [Brassica napus]
Length = 142
Score = 95.1 bits (235), Expect = 3e-22
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +2
Query: 137 FCFRFLFLQIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+C+ + IINDRETGRSRGFGFVTFKDE+SMK+AI+ MNGQ+LDGRSITVNEAQS
Sbjct: 4 YCYFLILKSIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQS 60
>ref|XP_013711806.1| glycine-rich RNA-binding protein GRP1A-like isoform X2 [Brassica
napus]
Length = 141
Score = 94.0 bits (232), Expect = 9e-22
Identities = 43/57 (75%), Positives = 51/57 (89%)
Frame = +2
Query: 137 FCFRFLFLQIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+C+ + IINDRETGRSRGFGFVTFKDE++MK+AI+ MNGQ+LDGRSITVNEAQS
Sbjct: 4 YCYFLILKSIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQS 60
>gb|EPS70351.1| hypothetical protein M569_04412, partial [Genlisea aurea]
Length = 104
Score = 92.4 bits (228), Expect = 1e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +2
Query: 161 QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+IINDRETGRSRGFGFVTFKDEQSMK+AI+ MNGQELDGR+ITVNEAQS
Sbjct: 38 KIINDRETGRSRGFGFVTFKDEQSMKDAIEGMNGQELDGRNITVNEAQS 86
>gb|ESQ46074.1| hypothetical protein EUTSA_v10000386mg [Eutrema salsugineum]
Length = 103
Score = 92.0 bits (227), Expect = 2e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +2
Query: 161 QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+IINDRETGRSRGFGFVTFKDE+SMK+AI+ MNGQELDGRSITVNEAQS
Sbjct: 38 KIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQELDGRSITVNEAQS 86
>gb|ALN22029.1| glycine-rich RNA binding protein 7b [Camelina sativa]
Length = 112
Score = 92.0 bits (227), Expect = 2e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +2
Query: 161 QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+IINDRETGRSRGFGFVTFKDE+SMK+AI+ MNGQELDGRSITVNEAQS
Sbjct: 38 KIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQELDGRSITVNEAQS 86
>ref|XP_010416924.2| PREDICTED: glycine-rich RNA-binding protein 7-like [Camelina
sativa]
Length = 173
Score = 93.6 bits (231), Expect = 3e-21
Identities = 45/49 (91%), Positives = 49/49 (100%)
Frame = +2
Query: 161 QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+IINDRETGRSRGFGFVTFKDE+SMK+AI+AMNGQELDGRSITVNEAQS
Sbjct: 38 KIINDRETGRSRGFGFVTFKDEKSMKDAIEAMNGQELDGRSITVNEAQS 86
>gb|AGO21482.1| glycine-rich RNA binding protein 7a [Camelina sativa]
Length = 123
Score = 92.0 bits (227), Expect = 3e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +2
Query: 161 QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+IINDRETGRSRGFGFVTFKDE+SMK+AI+ MNGQELDGRSITVNEAQS
Sbjct: 38 KIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQELDGRSITVNEAQS 86
>ref|XP_024013877.1| glycine-rich RNA-binding protein 7 isoform X2 [Eutrema salsugineum]
Length = 153
Score = 92.0 bits (227), Expect = 7e-21
Identities = 46/63 (73%), Positives = 51/63 (80%)
Frame = +2
Query: 119 LDLTVFFCFRFLFLQIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNE 298
L L + + IINDRETGRSRGFGFVTFKDE+SMK+AI+ MNGQELDGRSITVNE
Sbjct: 4 LSLVLCYSVTCFSQSIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQELDGRSITVNE 63
Query: 299 AQS 307
AQS
Sbjct: 64 AQS 66
>ref|XP_009140299.1| PREDICTED: glycine-rich RNA-binding protein GRP2A [Brassica rapa]
Length = 168
Score = 92.4 bits (228), Expect = 7e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +2
Query: 161 QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+IINDRETGRSRGFGFVTFKDEQSMK+AI+ MNGQ+LDGRSITVNEAQS
Sbjct: 38 KIINDRETGRSRGFGFVTFKDEQSMKDAIEGMNGQDLDGRSITVNEAQS 86
>gb|PIN06240.1| Nuclear cap-binding protein complex, subunit CBP20 (RRM
superfamily) [Handroanthus impetiginosus]
Length = 169
Score = 92.4 bits (228), Expect = 7e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +2
Query: 161 QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+IINDRETGRSRGFGFVTFKDEQSM++AI+ MNGQELDGRSITVNEAQS
Sbjct: 38 KIINDRETGRSRGFGFVTFKDEQSMRDAIEGMNGQELDGRSITVNEAQS 86
>ref|XP_013743542.1| glycine-rich RNA-binding protein GRP2A [Brassica napus]
Length = 169
Score = 92.4 bits (228), Expect = 7e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +2
Query: 161 QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+IINDRETGRSRGFGFVTFKDEQSMK+AI+ MNGQ+LDGRSITVNEAQS
Sbjct: 38 KIINDRETGRSRGFGFVTFKDEQSMKDAIEGMNGQDLDGRSITVNEAQS 86
>ref|XP_013631377.1| PREDICTED: glycine-rich RNA-binding protein GRP2A [Brassica
oleracea var. oleracea]
Length = 169
Score = 92.4 bits (228), Expect = 7e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +2
Query: 161 QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+IINDRETGRSRGFGFVTFKDEQSMK+AI+ MNGQ+LDGRSITVNEAQS
Sbjct: 38 KIINDRETGRSRGFGFVTFKDEQSMKDAIEGMNGQDLDGRSITVNEAQS 86
>emb|CDY15876.1| BnaA04g12350D [Brassica napus]
Length = 169
Score = 92.4 bits (228), Expect = 7e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +2
Query: 161 QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+IINDRETGRSRGFGFVTFKDEQSMK+AI+ MNGQ+LDGRSITVNEAQS
Sbjct: 38 KIINDRETGRSRGFGFVTFKDEQSMKDAIEGMNGQDLDGRSITVNEAQS 86
>gb|EPS66737.1| hypothetical protein M569_08040 [Genlisea aurea]
Length = 169
Score = 92.4 bits (228), Expect = 7e-21
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +2
Query: 161 QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
++INDRETGRSRGFGFVTFKDEQSM++AID MNGQELDGR+ITVNEAQS
Sbjct: 38 KVINDRETGRSRGFGFVTFKDEQSMRDAIDGMNGQELDGRNITVNEAQS 86
>ref|XP_018477974.1| PREDICTED: glycine-rich RNA-binding protein GRP2A [Raphanus
sativus]
Length = 171
Score = 92.4 bits (228), Expect = 8e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +2
Query: 161 QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+IINDRETGRSRGFGFVTFKDEQ+MK+AI+ MNGQELDGRSITVNEAQS
Sbjct: 38 KIINDRETGRSRGFGFVTFKDEQAMKDAIEGMNGQELDGRSITVNEAQS 86
>emb|CDY72366.1| BnaUnng05060D [Brassica napus]
Length = 171
Score = 92.4 bits (228), Expect = 8e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +2
Query: 161 QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+IINDRETGRSRGFGFVTFKDEQSMK+AI+ MNGQ+LDGRSITVNEAQS
Sbjct: 38 KIINDRETGRSRGFGFVTFKDEQSMKDAIEGMNGQDLDGRSITVNEAQS 86
>gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 92.0 bits (227), Expect = 8e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +2
Query: 161 QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+IINDRETGRSRGFGFVTFKDE+SMK+AI+ MNGQELDGRSITVNEAQS
Sbjct: 38 KIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQELDGRSITVNEAQS 86
>gb|EYU42616.1| hypothetical protein MIMGU_mgv1a016253mg [Erythranthe guttata]
Length = 129
Score = 90.9 bits (224), Expect = 1e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +2
Query: 161 QIINDRETGRSRGFGFVTFKDEQSMKEAIDAMNGQELDGRSITVNEAQS 307
+IINDRETGRSRGFGFVTFKDE+SM+EAI+ MNGQELDGR+ITVNEAQS
Sbjct: 36 KIINDRETGRSRGFGFVTFKDERSMREAIEGMNGQELDGRNITVNEAQS 84