BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00000092
         (6097 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica ...  2570   0.0  
gb|AAX19931.1| viral replicase [Nandina mosaic virus]                2426   0.0  
dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica ...  2425   0.0  
gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica m...  2415   0.0  
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...  2399   0.0  
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...  2397   0.0  
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...  2397   0.0  
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...  2397   0.0  
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...  2394   0.0  
emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica ...  2394   0.0  
gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica m...  2392   0.0  
gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica m...  2392   0.0  
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...  2392   0.0  
gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus]                 2391   0.0  
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...  2387   0.0  
gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica m...  2386   0.0  
gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica m...  2385   0.0  
gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]                 2385   0.0  
gb|AVL84357.1| RNA-dependent RNA polymerase [Plantago asiatica m...  2355   0.0  
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] >gi|...  2313   0.0  

>dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1387

 Score = 2570 bits (6661), Expect = 0.0
 Identities = 1260/1384 (91%), Positives = 1307/1384 (94%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVFSQLTDPSLKAVIQDEAYRTLK ELA TRHSNPFAQ+PEAADALEALGINSHP
Sbjct: 1    MSNVRNVFSQLTDPSLKAVIQDEAYRTLKHELAHTRHSNPFAQSPEAADALEALGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPK+NPVSFLFMKP+KLR+FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKDNPVSFLFMKPSKLRYFHRGPTHGDLFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQ+TV+SRLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETVLSRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSLYPQIYTLTYS+DGFMYIPGGHAGASYFHKYDQLEWLTVGHLTA NQPTITA
Sbjct: 181  EALYRLRSLYPQIYTLTYSDDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTANNQPTITA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QRLLRPLRSDIQ++LQFFRGRPSFV+LIKALDWQP+TLEFPVR+VNT+LRGPPGF N
Sbjct: 361  NLLQRLLRPLRSDIQKILQFFRGRPSFVRLIKALDWQPVTLEFPVRSVNTKLRGPPGFRN 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PFTKPHPVNPDD DTMR+FREF           +ADSLEGSAEN   HTSLKVGH+DLST
Sbjct: 421  PFTKPHPVNPDDDDTMRSFREFTHTLDNSSPATVADSLEGSAENPTIHTSLKVGHSDLST 480

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1692
            EQLRALHELGN+RLGGPLLPKIT                  T  S +  Q +H D+APVN
Sbjct: 481  EQLRALHELGNSRLGGPLLPKITLNEQSREPCPDLPPEPRPTTTSTTQAQENHPDQAPVN 540

Query: 1693 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1872
            S+P+TLPWV+WLPKLNALGFEALEIQ DPSTG+ IMPI DVR L KATLPEHW EP LSK
Sbjct: 541  SEPSTLPWVSWLPKLNALGFEALEIQIDPSTGDTIMPITDVRSLQKATLPEHWIEPSLSK 600

Query: 1873 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2052
            +LTTLR LNR PTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQ MLT+NVT NL
Sbjct: 601  ILTTLRSLNRSPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQAMLTDNVTTNL 660

Query: 2053 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2232
            AISVIHGAGGSGKSQALQ++LRQNP+LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 661  AISVIHGAGGSGKSQALQSMLRQNPDLPMEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 720

Query: 2233 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2412
            FVCSKSPVV+FDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP
Sbjct: 721  FVCSKSPVVVFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 780

Query: 2413 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2592
            ATTIF++LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSL+KKA
Sbjct: 781  ATTIFTKLSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLIKKA 840

Query: 2593 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2772
            AFTDAGHKVSTYAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 841  AFTDAGHKVSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 900

Query: 2773 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2952
            AFWEKLEATPYLKTFLSLVREDKIEEF+                 VEDK+TTL DFKE L
Sbjct: 901  AFWEKLEATPYLKTFLSLVREDKIEEFAAPKDAPKPIAPPVTHFPVEDKSTTLDDFKEGL 960

Query: 2953 SDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEF 3132
            +DKFDREIFTEAHGHTNCVQG+DPTTQLFSHQQAKDEALLWETIKARLTISTPEAN+EEF
Sbjct: 961  NDKFDREIFTEAHGHTNCVQGNDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEF 1020

Query: 3133 RAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSP 3312
            RAKKDLGDILW NYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSP
Sbjct: 1021 RAKKDLGDILWTNYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSP 1080

Query: 3313 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP 3492
            DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP
Sbjct: 1081 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP 1140

Query: 3493 NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 3672
            NNIMINCEKTPQDLSRWVL++WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW
Sbjct: 1141 NNIMINCEKTPQDLSRWVLSHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 1200

Query: 3673 VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDD 3852
            VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF IPEGTAQIYAGDD
Sbjct: 1201 VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFNIPEGTAQIYAGDD 1260

Query: 3853 CAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 4032
            CAIAQVCPEKPSFALLKNRIALQAKPAY+PQERGQWAEFCGYLITPKGLIKDPLKLHASL
Sbjct: 1261 CAIAQVCPEKPSFALLKNRIALQAKPAYSPQERGQWAEFCGYLITPKGLIKDPLKLHASL 1320

Query: 4033 ELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGG 4212
            ELAKAQKKAGVKDAISNV+ANYSLDA+LAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGG
Sbjct: 1321 ELAKAQKKAGVKDAISNVVANYSLDARLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGG 1380

Query: 4213 SPFL 4224
            SPFL
Sbjct: 1381 SPFL 1384


>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score = 2426 bits (6287), Expect = 0.0
 Identities = 1198/1384 (86%), Positives = 1256/1384 (90%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRH+NPFAQ+P+AADALEALGINSHP
Sbjct: 1    MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHTNPFAQSPDAADALEALGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR+FHRGPTHGDFFLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRYFHRGPTHGDFFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQDTV++RLENI T+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTVLNRLENISTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLT+GHL APNQPT+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTIGHLQAPNQPTVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTT+ YVTVPDIFLPEKYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTDPYVTVPDIFLPEKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEF ASLDSHTCFEDVLSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFAASLDSHTCFEDVLSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QRLLRPLR+D+QR+L FFRGRPSFVKLIKALDWQPITLEFPVR VNTRLRGPPGF +
Sbjct: 361  NLLQRLLRPLRADMQRILHFFRGRPSFVKLIKALDWQPITLEFPVRRVNTRLRGPPGFLS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PFT+P PVNPDDA+T  +FREF           + + LE S E+  +HTSLKV    LS 
Sbjct: 421  PFTRPQPVNPDDAETTESFREFIQPLNPSPTATVTEMLENSTESDVTHTSLKVVPQSLSP 480

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1692
            EQL ALHELGN+R GGP+LPK                    T  S+ L +  H    P  
Sbjct: 481  EQLSALHELGNSRCGGPMLPK---------------RSSNHTHTSSDLLRRRH----PRQ 521

Query: 1693 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1872
                  P  +   K   +GFEALEIQTDPSTG+ IMPI D R+LP+A +P HW+ P   K
Sbjct: 522  QRSTNPPMGSLAAKAKRIGFEALEIQTDPSTGQPIMPITDTRELPRAIMPAHWDSPQFEK 581

Query: 1873 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2052
            ++ TLR LNRFPTPW PDRARARAFTSDVKNSRTGKALHRE+QTWKETQTMLT+N   + 
Sbjct: 582  IIATLRNLNRFPTPWSPDRARARAFTSDVKNSRTGKALHRESQTWKETQTMLTDNAEIHT 641

Query: 2053 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2232
            AISVIHGAGGSGKSQALQTLLRQNP+LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 642  AISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 701

Query: 2233 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2412
            FV S+ PVVIFDDYGKLPQGYIEAFAMTHA+LEL+ILTGDPRQSTHHEANEEALISKL+P
Sbjct: 702  FVSSRGPVVIFDDYGKLPQGYIEAFAMTHANLELIILTGDPRQSTHHEANEEALISKLSP 761

Query: 2413 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2592
            ATT FSELSRYYINATHRNSKFLANKLG+YSSN CPLKVTYGFQPQPG+HLLVPSL+KKA
Sbjct: 762  ATTTFSELSRYYINATHRNSKFLANKLGIYSSNHCPLKVTYGFQPQPGLHLLVPSLVKKA 821

Query: 2593 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2772
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDS HFVNSNAQSS
Sbjct: 822  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSNHFVNSNAQSS 881

Query: 2773 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2952
            AFWEKLEATPYLKTFLSLVREDKIEEFS                 VE+ TT L DF+E L
Sbjct: 882  AFWEKLEATPYLKTFLSLVREDKIEEFSAPPDPPKSVMPPVTHFPVEECTTALDDFREEL 941

Query: 2953 SDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEF 3132
             DKFDREIFTEAHGHTNCVQ DDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEF
Sbjct: 942  HDKFDREIFTEAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEF 1001

Query: 3133 RAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSP 3312
            RAKKDLGDILW NYHKAM LPKEQP+FSE+LWTRCAEEVQNTYLKKS+NQ+KGGERRQSP
Sbjct: 1002 RAKKDLGDILWTNYHKAMNLPKEQPDFSEELWTRCAEEVQNTYLKKSLNQLKGGERRQSP 1061

Query: 3313 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP 3492
            DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP
Sbjct: 1062 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP 1121

Query: 3493 NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 3672
            NNIMINCEKTPQDLSRWVL+YWDFSKP+YANDFTAFDQSQDGAMLQFEILKAKYFNLPEW
Sbjct: 1122 NNIMINCEKTPQDLSRWVLSYWDFSKPAYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 1181

Query: 3673 VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDD 3852
            VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF IPEGTAQIYAGDD
Sbjct: 1182 VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFNIPEGTAQIYAGDD 1241

Query: 3853 CAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 4032
            CAIAQVCPEKPSFALLK+RIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL
Sbjct: 1242 CAIAQVCPEKPSFALLKDRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 1301

Query: 4033 ELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGG 4212
            ELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGD+L DLLSPRQAHLHQVTVRDLVKFGG
Sbjct: 1302 ELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDELHDLLSPRQAHLHQVTVRDLVKFGG 1361

Query: 4213 SPFL 4224
            SPFL
Sbjct: 1362 SPFL 1365


>dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1387

 Score = 2425 bits (6284), Expect = 0.0
 Identities = 1186/1384 (85%), Positives = 1251/1384 (90%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1    MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHTNPFAQSPEAADALEKLGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPV+FLFMKPAKLR+FHRGPTH D FLN HV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVAFLFMKPAKLRYFHRGPTHRDLFLNDHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQ+T++SRLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETILSRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH+YDQLEWLTVGHL+A  QPT+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHRYDQLEWLTVGHLSAQGQPTVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNY+TP +RTFTT + YVTVPDIFLPE+YNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYMTPPKRTFTTADQYVTVPDIFLPERYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QRLLRP+R+D+QR++QFF+G+PSFVKLIKALDWQPITLEFPVR+V T +RGPPGF +
Sbjct: 361  NLLQRLLRPIRADMQRIVQFFKGQPSFVKLIKALDWQPITLEFPVRSVKTHVRGPPGFQS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PFTKPHPVN DD  T + F++F           +A +LE + E  A HT LK+    L+ 
Sbjct: 421  PFTKPHPVNTDDGQTSKDFQDFTLRGAGTTHHTVAAALEATTECEAGHTCLKIATEHLTE 480

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1692
             QL ALH LGNTR GGPLLP  T                   +        +   E P N
Sbjct: 481  PQLLALHNLGNTRCGGPLLPPATTSAQVEEPCPDLPPAPRAAEGQTQTPPQEEQGEQPRN 540

Query: 1693 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1872
             +P  LPWVAWLPKLNALGFEA EIQTDPSTG +IMPI D  DLP+ATLP HW +P L K
Sbjct: 541  VEPNELPWVAWLPKLNALGFEAREIQTDPSTGAMIMPITDTLDLPRATLPAHWEDPELQK 600

Query: 1873 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2052
            +LTTLR LNRFPTPW PDRARARAFTSDVKNSRTGKALHRE+  WKETQT+LT+    +L
Sbjct: 601  ILTTLRSLNRFPTPWTPDRARARAFTSDVKNSRTGKALHRESLVWKETQTLLTDTADVDL 660

Query: 2053 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2232
            AISVIHGAGGSGKSQALQTLLRQ+P LPIEVVLPTNELRLDWL+KLPHNPPEQFRTFERA
Sbjct: 661  AISVIHGAGGSGKSQALQTLLRQDPTLPIEVVLPTNELRLDWLRKLPHNPPEQFRTFERA 720

Query: 2233 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2412
            FVCS+SPVVIFDDYGKLPQGY+EAFAMTHA+LELVILTGDPRQSTHHEANEEALISKL P
Sbjct: 721  FVCSRSPVVIFDDYGKLPQGYLEAFAMTHANLELVILTGDPRQSTHHEANEEALISKLTP 780

Query: 2413 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2592
            AT +F++LSRYYINATHRNSKFLANKLGVYSSN CPLKVTYGFQPQPG+HLLVPSLMKKA
Sbjct: 781  ATAVFAQLSRYYINATHRNSKFLANKLGVYSSNPCPLKVTYGFQPQPGLHLLVPSLMKKA 840

Query: 2593 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2772
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 841  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 900

Query: 2773 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2952
            AFWEKLEATPYLKTFLSLVREDKI EFS                 VE ++TTL DFKE L
Sbjct: 901  AFWEKLEATPYLKTFLSLVREDKIMEFSASDDSPAPVAPPTTHFPVEGRSTTLDDFKEEL 960

Query: 2953 SDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEF 3132
             DKFDREIF EAHGHTNCVQ DD T QLFSHQQAKDEALLWETIKARLTISTPEAN+EEF
Sbjct: 961  DDKFDREIFNEAHGHTNCVQTDDTTIQLFSHQQAKDEALLWETIKARLTISTPEANLEEF 1020

Query: 3133 RAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSP 3312
            RAKKDLGDILW NYHKAM LPKEQP+FSEDLW RCAEEVQNTYLKKSINQIKGGERRQSP
Sbjct: 1021 RAKKDLGDILWVNYHKAMGLPKEQPDFSEDLWVRCAEEVQNTYLKKSINQIKGGERRQSP 1080

Query: 3313 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP 3492
            DFH H+ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP
Sbjct: 1081 DFHTHEILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP 1140

Query: 3493 NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 3672
            NNIMINCEKTPQD+SRWV+NYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW
Sbjct: 1141 NNIMINCEKTPQDISRWVMNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 1200

Query: 3673 VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDD 3852
            VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDD
Sbjct: 1201 VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDD 1260

Query: 3853 CAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 4032
            CAIAQVCPEKPSF LLKNR+ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL
Sbjct: 1261 CAIAQVCPEKPSFTLLKNRLALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 1320

Query: 4033 ELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGG 4212
            ELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGG
Sbjct: 1321 ELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGG 1380

Query: 4213 SPFL 4224
            SPFL
Sbjct: 1381 SPFL 1384


>gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1387

 Score = 2415 bits (6258), Expect = 0.0
 Identities = 1189/1384 (85%), Positives = 1245/1384 (89%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVFSQLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALEALGINSHP
Sbjct: 1    MSNVRNVFSQLTDPSLKAVIQDEAYRVLKRELAQTRHTNPFAQSPEAADALEALGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKA+ESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAVESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQ+T+I+RL +IPT IAFMGDTLHFLSPSF+TALFAHSP+LQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIINRLADIPTQIAFMGDTLHFLSPSFLTALFAHSPRLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH+YDQLEWLTVGHLTAP QPTITA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHRYDQLEWLTVGHLTAPGQPTITA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTP RRTF T++HYVTVP IFLPE YNCRTPISKT MMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPARRTFATSDHYVTVPQIFLPEDYNCRTPISKTTMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCF+DVLSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFQDVLSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QRLLRPLR+D QRVLQFF+GRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF N
Sbjct: 361  NLLQRLLRPLRADFQRVLQFFQGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKN 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PFT+P PVNP+DADT R F++F           +  +LE +AE+   HT LKV    L  
Sbjct: 421  PFTQPQPVNPEDADTSRGFQDFTRATTPKLQPTVEATLEATAESSDHHTQLKVLCDTLPE 480

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1692
            +QL A+H LG+ R GGPLLP  T                  + AS +    +  D  P  
Sbjct: 481  KQLEAIHALGHLRCGGPLLPAPTQSCSPAEPCPDLPPSPVKSTASPASPDPNVLDAQPTT 540

Query: 1693 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1872
              P TLPWVAWLPKLNALGFEALE+Q DPSTGE+IMPI D RDLP+ATLP HW    L  
Sbjct: 541  QAPETLPWVAWLPKLNALGFEALEVQHDPSTGEMIMPITDTRDLPRATLPPHWQGHDLES 600

Query: 1873 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2052
            +LTTLR LNRFPTPW PDR RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTEN  A+L
Sbjct: 601  ILTTLRSLNRFPTPWSPDRTRARAFTSDVKNSRTGKALHRESQAWKETQTMLTENTQADL 660

Query: 2053 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2232
            AISVIHGAGGSGKSQALQTLLRQNP LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 661  AISVIHGAGGSGKSQALQTLLRQNPSLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 720

Query: 2233 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2412
            FV S SPVVIFDDYGKLPQGY+EAFA+THA+LEL ILTGDPRQSTHHE+NEEALISKL P
Sbjct: 721  FVSSHSPVVIFDDYGKLPQGYLEAFALTHANLELAILTGDPRQSTHHESNEEALISKLPP 780

Query: 2413 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2592
            ATTI+S LSRYYINATHRNSK+LANKLGVYS+NSCPL VTYGFQP PGMHLLVPSL+KKA
Sbjct: 781  ATTIYSTLSRYYINATHRNSKYLANKLGVYSANSCPLNVTYGFQPLPGMHLLVPSLVKKA 840

Query: 2593 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2772
            AFTD GHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 841  AFTDVGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 900

Query: 2773 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2952
            AFWEKLEATPYLKTFLSLVREDKI EF                  VE+  TTL DFKE L
Sbjct: 901  AFWEKLEATPYLKTFLSLVREDKITEFQAPEDAPKPVTPPVTHFPVEEPATTLDDFKEEL 960

Query: 2953 SDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEF 3132
             DKFDREIFT   GHTNCVQ DDPT QLFSHQQAKDEALLWETIKARLTISTPEANI+EF
Sbjct: 961  HDKFDREIFTSDRGHTNCVQTDDPTIQLFSHQQAKDEALLWETIKARLTISTPEANIDEF 1020

Query: 3133 RAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSP 3312
            RAKKDLGDILWANYH+AM LPKEQP+FSEDLWTRCAEEVQNTYLKKS+ Q+KGGERRQSP
Sbjct: 1021 RAKKDLGDILWANYHRAMGLPKEQPDFSEDLWTRCAEEVQNTYLKKSLAQLKGGERRQSP 1080

Query: 3313 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP 3492
            DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL P
Sbjct: 1081 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALGP 1140

Query: 3493 NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 3672
            NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW
Sbjct: 1141 NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 1200

Query: 3673 VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDD 3852
            VIEGYLDIKLSPKIF+GTLSIMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDD
Sbjct: 1201 VIEGYLDIKLSPKIFMGTLSIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDD 1260

Query: 3853 CAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 4032
            CAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL
Sbjct: 1261 CAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 1320

Query: 4033 ELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGG 4212
            ELAKAQ+KAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGG
Sbjct: 1321 ELAKAQRKAGVKDAIANVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGG 1380

Query: 4213 SPFL 4224
            SPFL
Sbjct: 1381 SPFL 1384


>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 2399 bits (6217), Expect = 0.0
 Identities = 1191/1389 (85%), Positives = 1241/1389 (89%), Gaps = 5/1389 (0%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQDT+I RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTIIKRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLT P Q T+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTTPGQITVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD+FLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDVFLPAKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QR+LRPL+S I ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +
Sbjct: 361  NLLQRMLRPLKSGITQLLNFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PF +P PVNPDDA+T ++F+ F              +LE  AE    H SL +    L  
Sbjct: 421  PFARPQPVNPDDAETTQSFQAFCQATITAEA-----ALEQQAETPDEHQSLSLKCPTLPE 475

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLN-----QGDHTD 1677
             QL ALHELGNTR GGPLLPK                      A  S N     +   T 
Sbjct: 476  HQLWALHELGNTRCGGPLLPK-------GPAKLTTVEPCPDLPAENSANPEPPRKTTQTL 528

Query: 1678 EAPVNSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNE 1857
            + P   DP TLPWVAWLPKLNALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW  
Sbjct: 529  DLPHPEDPTTLPWVAWLPKLNALGFEALEIQTDPSTGEMIMPITDTRELPRAEGHAHWQG 588

Query: 1858 PGLSKVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTEN 2037
            P + ++++TLR  NR+PTPW PDR+RA+AFTSDVKNSRTGKALHRE+Q WKETQTML EN
Sbjct: 589  PDMERIISTLRSFNRYPTPWNPDRSRAKAFTSDVKNSRTGKALHRESQVWKETQTMLAEN 648

Query: 2038 VTANLAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFR 2217
               NLAISVIHGAGGSGKSQALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFR
Sbjct: 649  SQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFR 708

Query: 2218 TFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALI 2397
            TFERAFVCS+ PVVIFDDYGKLPQGY+EAFA+THASLELVILTGDPRQSTHHE+NEEALI
Sbjct: 709  TFERAFVCSRCPVVIFDDYGKLPQGYLEAFALTHASLELVILTGDPRQSTHHESNEEALI 768

Query: 2398 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 2577
            SKL PAT IFSELSRYYINATHRNSKFLANKLGVYSSN CPLKVTYGFQPQPG+HLLVPS
Sbjct: 769  SKLPPATAIFSELSRYYINATHRNSKFLANKLGVYSSNPCPLKVTYGFQPQPGLHLLVPS 828

Query: 2578 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 2757
            L+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS
Sbjct: 829  LVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 888

Query: 2758 NAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGD 2937
            NAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+                 VED TTTL D
Sbjct: 889  NAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTATTAEAKPVAPPCTHFPVEDGTTTLDD 948

Query: 2938 FKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEA 3117
            FKE L DKFDREIF   HGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLTIS PEA
Sbjct: 949  FKEELHDKFDREIFNPTHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTISNPEA 1008

Query: 3118 NIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGE 3297
            N+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+ QIKGGE
Sbjct: 1009 NLAEFRAKKDLGDILWENYRKAMKLPNEQPDFSEDLWIRCAEEVQNTYLKKSVAQIKGGE 1068

Query: 3298 RRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFR 3477
            RRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFR
Sbjct: 1069 RRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFR 1128

Query: 3478 DALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYF 3657
            +ALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYF
Sbjct: 1129 EALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYF 1188

Query: 3658 NLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQI 3837
            NLPEWVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQI
Sbjct: 1189 NLPEWVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQI 1248

Query: 3838 YAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLK 4017
            YAGDDCAIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLK
Sbjct: 1249 YAGDDCAIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLK 1308

Query: 4018 LHASLELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDL 4197
            LHASLELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDL
Sbjct: 1309 LHASLELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDL 1368

Query: 4198 VKFGGSPFL 4224
            VKFGGSPFL
Sbjct: 1369 VKFGGSPFL 1377


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 2397 bits (6212), Expect = 0.0
 Identities = 1187/1384 (85%), Positives = 1240/1384 (89%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQDT+I RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTIIKRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +
Sbjct: 361  NLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PF +P PVNPDDA+T ++F+ F           +  +L   +E    H SL +    L  
Sbjct: 421  PFARPQPVNPDDAETTQSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCPTLPE 475

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1692
             QL ALHELGN R GGPLLPK                           ++   + + P  
Sbjct: 476  HQLWALHELGNARCGGPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHP 533

Query: 1693 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1872
             DP+TLPWVAWLPKLNALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW  P + +
Sbjct: 534  QDPSTLPWVAWLPKLNALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMER 593

Query: 1873 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2052
            +L+TLR LNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN   NL
Sbjct: 594  ILSTLRSLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNL 653

Query: 2053 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2232
            AISVIHGAGGSGKSQALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 654  AISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 713

Query: 2233 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2412
            FVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL P
Sbjct: 714  FVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPP 773

Query: 2413 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2592
            AT IFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKA
Sbjct: 774  ATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKA 833

Query: 2593 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2772
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 834  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893

Query: 2773 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2952
            AFWEKLEATPYLKTFLSLVREDKIEEF+                 VED TTTL DFKE L
Sbjct: 894  AFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEEL 953

Query: 2953 SDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEF 3132
             DKFDREIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EF
Sbjct: 954  RDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEF 1013

Query: 3133 RAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSP 3312
            RAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSP
Sbjct: 1014 RAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSP 1073

Query: 3313 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP 3492
            DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL P
Sbjct: 1074 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRP 1133

Query: 3493 NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 3672
            NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW
Sbjct: 1134 NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 1193

Query: 3673 VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDD 3852
            VIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDD
Sbjct: 1194 VIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDD 1253

Query: 3853 CAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 4032
            CAIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL
Sbjct: 1254 CAIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 1313

Query: 4033 ELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGG 4212
            ELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGG
Sbjct: 1314 ELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGG 1373

Query: 4213 SPFL 4224
            S FL
Sbjct: 1374 SSFL 1377


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 2397 bits (6212), Expect = 0.0
 Identities = 1187/1384 (85%), Positives = 1241/1384 (89%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQDT+I RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTIIKRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +
Sbjct: 361  NLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PF +P PVNPDDA+T ++F+ F           +  +L   +E    H SL +  + L  
Sbjct: 421  PFARPQPVNPDDAETTQSFQAFCQATAT-----VEXTLAQQSETPDEHQSLSLKCSTLPE 475

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1692
             QL ALHELGN R GGPLLPK                           ++   + + P  
Sbjct: 476  HQLWALHELGNARCGGPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHP 533

Query: 1693 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1872
             DP+TLPWVAWLPKLNALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW  P + +
Sbjct: 534  QDPSTLPWVAWLPKLNALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMER 593

Query: 1873 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2052
            +L+TLRGLNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN   NL
Sbjct: 594  ILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNL 653

Query: 2053 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2232
            AISVIHGAGGSGKSQALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 654  AISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 713

Query: 2233 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2412
            FVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL P
Sbjct: 714  FVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPP 773

Query: 2413 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2592
            AT IFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKA
Sbjct: 774  ATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKA 833

Query: 2593 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2772
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 834  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893

Query: 2773 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2952
            AFWEKLEATPYLKTFLSLVREDKIEEF+                 VED TTTL DFKE L
Sbjct: 894  AFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEEL 953

Query: 2953 SDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEF 3132
             DKFDREIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EF
Sbjct: 954  RDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEF 1013

Query: 3133 RAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSP 3312
            RAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSP
Sbjct: 1014 RAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSP 1073

Query: 3313 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP 3492
            DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL P
Sbjct: 1074 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRP 1133

Query: 3493 NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 3672
            NNIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW
Sbjct: 1134 NNIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 1193

Query: 3673 VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDD 3852
            VIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDD
Sbjct: 1194 VIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDD 1253

Query: 3853 CAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 4032
            CAIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL
Sbjct: 1254 CAIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 1313

Query: 4033 ELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGG 4212
            ELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGG
Sbjct: 1314 ELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGG 1373

Query: 4213 SPFL 4224
            S FL
Sbjct: 1374 SSFL 1377


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 2397 bits (6211), Expect = 0.0
 Identities = 1187/1384 (85%), Positives = 1241/1384 (89%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQDT+I RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTIIKRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +
Sbjct: 361  NLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PF +P PVNPDDA+T ++F+ F           +  +L   +E    H SL +  + L  
Sbjct: 421  PFARPQPVNPDDAETTQSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCSTLPE 475

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1692
             QL ALHELGN R GGPLLPK                           ++   + + P  
Sbjct: 476  HQLWALHELGNARCGGPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHP 533

Query: 1693 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1872
             DP+TLPWVAWLPKLNALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW  P + +
Sbjct: 534  QDPSTLPWVAWLPKLNALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMER 593

Query: 1873 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2052
            +L+TLRGLNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN   NL
Sbjct: 594  ILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNL 653

Query: 2053 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2232
            AISVIHGAGGSGKSQALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 654  AISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 713

Query: 2233 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2412
            FVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL P
Sbjct: 714  FVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPP 773

Query: 2413 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2592
            AT IFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKA
Sbjct: 774  ATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKA 833

Query: 2593 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2772
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 834  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893

Query: 2773 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2952
            AFWEKLEATPYLKTFLSLVREDKIEEF+                 VED TTTL DFKE L
Sbjct: 894  AFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEEL 953

Query: 2953 SDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEF 3132
             DKFDREIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EF
Sbjct: 954  RDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEF 1013

Query: 3133 RAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSP 3312
            RAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSP
Sbjct: 1014 RAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSP 1073

Query: 3313 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP 3492
            DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL P
Sbjct: 1074 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRP 1133

Query: 3493 NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 3672
            NNIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW
Sbjct: 1134 NNIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 1193

Query: 3673 VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDD 3852
            VIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDD
Sbjct: 1194 VIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDD 1253

Query: 3853 CAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 4032
            CAIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL
Sbjct: 1254 CAIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 1313

Query: 4033 ELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGG 4212
            ELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGG
Sbjct: 1314 ELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGG 1373

Query: 4213 SPFL 4224
            S FL
Sbjct: 1374 SSFL 1377


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 2394 bits (6205), Expect = 0.0
 Identities = 1186/1384 (85%), Positives = 1240/1384 (89%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQDT+I RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTIIKRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +
Sbjct: 361  NLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PF +P PVNPDDA+T ++F+ F           +  +L   +E    H SL +  + L  
Sbjct: 421  PFARPQPVNPDDAETTQSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCSTLPE 475

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1692
             QL ALHELGN R G PLLPK                           ++   + + P  
Sbjct: 476  HQLWALHELGNARCGAPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHP 533

Query: 1693 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1872
             DP+TLPWVAWLPKLNALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW  P + +
Sbjct: 534  QDPSTLPWVAWLPKLNALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMER 593

Query: 1873 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2052
            +L+TLRGLNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN   NL
Sbjct: 594  ILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNL 653

Query: 2053 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2232
            AISVIHGAGGSGKSQALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 654  AISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 713

Query: 2233 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2412
            FVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL P
Sbjct: 714  FVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPP 773

Query: 2413 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2592
            AT IFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKA
Sbjct: 774  ATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKA 833

Query: 2593 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2772
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 834  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893

Query: 2773 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2952
            AFWEKLEATPYLKTFLSLVREDKIEEF+                 VED TTTL DFKE L
Sbjct: 894  AFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEEL 953

Query: 2953 SDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEF 3132
             DKFDREIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EF
Sbjct: 954  RDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEF 1013

Query: 3133 RAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSP 3312
            RAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSP
Sbjct: 1014 RAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSP 1073

Query: 3313 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP 3492
            DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL P
Sbjct: 1074 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRP 1133

Query: 3493 NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 3672
            NNIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW
Sbjct: 1134 NNIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 1193

Query: 3673 VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDD 3852
            VIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDD
Sbjct: 1194 VIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDD 1253

Query: 3853 CAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 4032
            CAIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL
Sbjct: 1254 CAIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 1313

Query: 4033 ELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGG 4212
            ELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGG
Sbjct: 1314 ELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGG 1373

Query: 4213 SPFL 4224
            S FL
Sbjct: 1374 SSFL 1377


>emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 2394 bits (6205), Expect = 0.0
 Identities = 1182/1385 (85%), Positives = 1245/1385 (89%), Gaps = 1/1385 (0%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEALGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQ+T+I RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIIKRLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP   T+TA
Sbjct: 181  EALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QR+LRPL S   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +
Sbjct: 361  NLLQRILRPLTSGATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PFT+P PVNPDDA+T  +F+ F           +   LE  AE    H SL++    LS 
Sbjct: 421  PFTRPQPVNPDDAETTHSFQAFCQAAAA-----VETILEQQAETPDEHQSLRLDCPTLSE 475

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGD-HTDEAPV 1689
             QL ALHELGN R GGPLLP+                    T A+   +Q +      P 
Sbjct: 476  HQLWALHELGNARCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPS 532

Query: 1690 NSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLS 1869
              DP TLPWVAWLPKLNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW  P + 
Sbjct: 533  PQDPTTLPWVAWLPKLNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDME 592

Query: 1870 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 2049
            ++++TLR LNR+PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   N
Sbjct: 593  QIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTN 652

Query: 2050 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFER 2229
            LAISVIHGAGGSGKSQALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFER
Sbjct: 653  LAISVIHGAGGSGKSQALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFER 712

Query: 2230 AFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLA 2409
            AFVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL 
Sbjct: 713  AFVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLP 772

Query: 2410 PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2589
            PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKK
Sbjct: 773  PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKK 832

Query: 2590 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2769
            AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQS
Sbjct: 833  AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQS 892

Query: 2770 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2949
            SAFWEKLEATPYLKTFLSLVRED++ EFS                 VED TTTL DF+E 
Sbjct: 893  SAFWEKLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREE 952

Query: 2950 LSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEE 3129
            L DKFDREIF +AHGHTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEAN+ E
Sbjct: 953  LQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAE 1012

Query: 3130 FRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQS 3309
            FRAKKDLGDILW NY KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQS
Sbjct: 1013 FRAKKDLGDILWENYRKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQS 1072

Query: 3310 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALS 3489
            PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL 
Sbjct: 1073 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALR 1132

Query: 3490 PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 3669
            PNNIMINCEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE
Sbjct: 1133 PNNIMINCEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 1192

Query: 3670 WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGD 3849
            WVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGD
Sbjct: 1193 WVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGD 1252

Query: 3850 DCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 4029
            DCAI+QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS
Sbjct: 1253 DCAISQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 1312

Query: 4030 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFG 4209
            LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFG
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFG 1372

Query: 4210 GSPFL 4224
            GSPFL
Sbjct: 1373 GSPFL 1377


>gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 2392 bits (6199), Expect = 0.0
 Identities = 1178/1385 (85%), Positives = 1246/1385 (89%), Gaps = 1/1385 (0%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQ+T+I RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIIKRLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP   T+TA
Sbjct: 181  EALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QR+LRPL S   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +
Sbjct: 361  NLLQRILRPLTSGATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PF +P PVNPDDA+T  +F+ F           +   LE SAE    H SL++    LS 
Sbjct: 421  PFARPQPVNPDDAETTHSFQAFCQATAA-----VGTILEQSAETPDEHQSLRLNCPTLSE 475

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGD-HTDEAPV 1689
             QL ALHELGNTR GGPLLP+                    T A+   +Q +    + P 
Sbjct: 476  HQLWALHELGNTRCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPDLPS 532

Query: 1690 NSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLS 1869
              DP TLPWVAWLPKLNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW  P + 
Sbjct: 533  PQDPTTLPWVAWLPKLNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDME 592

Query: 1870 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 2049
            ++++TLR +NR+PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   N
Sbjct: 593  QIISTLRSINRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTN 652

Query: 2050 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFER 2229
            LA+SVIHGAGGSGKSQALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFER
Sbjct: 653  LAVSVIHGAGGSGKSQALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFER 712

Query: 2230 AFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLA 2409
            AFVCS+ PVVIFDDYGKLPQGY+EAFAMTHA+LELVILTGDPRQSTHHEANEEALISKL 
Sbjct: 713  AFVCSRCPVVIFDDYGKLPQGYLEAFAMTHANLELVILTGDPRQSTHHEANEEALISKLP 772

Query: 2410 PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2589
            PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSLMKK
Sbjct: 773  PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLMKK 832

Query: 2590 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2769
            AAFTDAGHKVSTYAGCQGITAPRVQILLD+DTTMCTKEVLYTALSRAVDSIHF+NSNAQS
Sbjct: 833  AAFTDAGHKVSTYAGCQGITAPRVQILLDSDTTMCTKEVLYTALSRAVDSIHFINSNAQS 892

Query: 2770 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2949
            SAFWEKLEATPYLKTFLSLVRED++ EFS                 VED TTTL DF+E 
Sbjct: 893  SAFWEKLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREE 952

Query: 2950 LSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEE 3129
            L DKFDREIF +AHG+TNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS PEAN+ E
Sbjct: 953  LQDKFDREIFNQAHGYTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISNPEANLAE 1012

Query: 3130 FRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQS 3309
            FRAKKDLGDILW NY KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQS
Sbjct: 1013 FRAKKDLGDILWENYRKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQS 1072

Query: 3310 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALS 3489
            PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL 
Sbjct: 1073 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALR 1132

Query: 3490 PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 3669
            PNNIMINCEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE
Sbjct: 1133 PNNIMINCEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 1192

Query: 3670 WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGD 3849
            WVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGD
Sbjct: 1193 WVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGD 1252

Query: 3850 DCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 4029
            DCAI+QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS
Sbjct: 1253 DCAISQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 1312

Query: 4030 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFG 4209
            LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFG
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFG 1372

Query: 4210 GSPFL 4224
            GSPFL
Sbjct: 1373 GSPFL 1377


>gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
 gb|AMY62708.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 2392 bits (6199), Expect = 0.0
 Identities = 1179/1385 (85%), Positives = 1243/1385 (89%), Gaps = 1/1385 (0%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQ+T+I RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIIKRLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP  PT+TA
Sbjct: 181  EALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLPTVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QR+LRPL S   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +
Sbjct: 361  NLLQRILRPLTSSATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PFT+P PVNPDDA+T  +F+ F           +   LE  AE    H SL++    LS 
Sbjct: 421  PFTRPQPVNPDDAETTHSFQAFCQAAAA-----VETILEQQAETPDEHQSLRLDCPTLSE 475

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGD-HTDEAPV 1689
             QL ALH LGN R GGPLLP+                    T A+   +Q +      P 
Sbjct: 476  HQLWALHALGNARCGGPLLPQ---RPDTSTAVEPCPDLPPETHAAPEPSQRNTQAPNLPS 532

Query: 1690 NSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLS 1869
              DP TLPWVAWLPKLNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW  P + 
Sbjct: 533  PQDPTTLPWVAWLPKLNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDME 592

Query: 1870 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 2049
            ++++TLR LNR+PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   N
Sbjct: 593  QIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTN 652

Query: 2050 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFER 2229
            +AISVIHGAGGSGKSQALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFER
Sbjct: 653  VAISVIHGAGGSGKSQALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFER 712

Query: 2230 AFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLA 2409
            AFVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL 
Sbjct: 713  AFVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLP 772

Query: 2410 PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2589
            PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKK
Sbjct: 773  PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKK 832

Query: 2590 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2769
            AAFTDAGHK STYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQS
Sbjct: 833  AAFTDAGHKASTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQS 892

Query: 2770 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2949
            SAFWEKLEATPYLKTFLSLVRED++ EFS                 VED TTTL DF+E 
Sbjct: 893  SAFWEKLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREE 952

Query: 2950 LSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEE 3129
            L DKFDREIF +AHGHTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEAN+ E
Sbjct: 953  LQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAE 1012

Query: 3130 FRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQS 3309
            FRAKKDLGDILW NY KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQS
Sbjct: 1013 FRAKKDLGDILWENYRKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQS 1072

Query: 3310 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALS 3489
            PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL 
Sbjct: 1073 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALR 1132

Query: 3490 PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 3669
            PNNIMINCEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE
Sbjct: 1133 PNNIMINCEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 1192

Query: 3670 WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGD 3849
            WVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGD
Sbjct: 1193 WVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGD 1252

Query: 3850 DCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 4029
            DCAI+QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS
Sbjct: 1253 DCAISQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 1312

Query: 4030 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFG 4209
            LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFG
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFG 1372

Query: 4210 GSPFL 4224
            GSPFL
Sbjct: 1373 GSPFL 1377


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 2392 bits (6198), Expect = 0.0
 Identities = 1184/1384 (85%), Positives = 1238/1384 (89%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQDT+I RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTIIKRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +
Sbjct: 361  NLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PF +P PVNPDDA+T ++F+ F           +  +L   +E    H SL +    L  
Sbjct: 421  PFARPQPVNPDDAETTQSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCPTLPE 475

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1692
             QL ALHELGN R GGPLLPK                           ++   + + P  
Sbjct: 476  HQLWALHELGNARCGGPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHP 533

Query: 1693 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1872
             DP+TLPWVAWLPKLNALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW  P + +
Sbjct: 534  QDPSTLPWVAWLPKLNALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMER 593

Query: 1873 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2052
            +L+TLR LNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN   NL
Sbjct: 594  ILSTLRSLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNL 653

Query: 2053 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2232
            AISVIHGAGGSGKSQALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 654  AISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 713

Query: 2233 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2412
            FVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL P
Sbjct: 714  FVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPP 773

Query: 2413 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2592
            AT IFSELSRYYINATHRNSK LANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKA
Sbjct: 774  ATAIFSELSRYYINATHRNSKLLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKA 833

Query: 2593 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2772
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 834  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893

Query: 2773 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2952
            AFWEKLEATPYLKTFLSLVREDKIEEF+                 VED TTTL DFKE L
Sbjct: 894  AFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEEL 953

Query: 2953 SDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEF 3132
             DKFDREIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EF
Sbjct: 954  RDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEF 1013

Query: 3133 RAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSP 3312
            RAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSP
Sbjct: 1014 RAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSP 1073

Query: 3313 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP 3492
            DFHEH ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL P
Sbjct: 1074 DFHEHHILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRP 1133

Query: 3493 NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 3672
            NNIMINCE+TPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW
Sbjct: 1134 NNIMINCERTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 1193

Query: 3673 VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDD 3852
            VIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDD
Sbjct: 1194 VIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDD 1253

Query: 3853 CAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 4032
            CAIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL
Sbjct: 1254 CAIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 1313

Query: 4033 ELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGG 4212
            ELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGG
Sbjct: 1314 ELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGG 1373

Query: 4213 SPFL 4224
            S FL
Sbjct: 1374 SSFL 1377


>gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 2391 bits (6196), Expect = 0.0
 Identities = 1180/1385 (85%), Positives = 1244/1385 (89%), Gaps = 1/1385 (0%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQ+T+I RLENIPT+IAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIIKRLENIPTSIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP   T+TA
Sbjct: 181  EALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QR+LRPL S   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +
Sbjct: 361  NLLQRILRPLTSGATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PFT+P PVNPDDA+T  +F+ F           +   LE  AE    H SL++    LS 
Sbjct: 421  PFTRPQPVNPDDAETTHSFQAFCQAAAA-----VETILEQQAETPDEHQSLRLDCPTLSE 475

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGD-HTDEAPV 1689
             QL ALHELGN R GGPLLP+                    T A+   +Q +      P 
Sbjct: 476  HQLWALHELGNARCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPS 532

Query: 1690 NSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLS 1869
              DP TLPWVAWLPKLNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW  P + 
Sbjct: 533  PQDPTTLPWVAWLPKLNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDME 592

Query: 1870 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 2049
            ++++TLR LNR+PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   N
Sbjct: 593  QIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTN 652

Query: 2050 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFER 2229
            LAISVIHGAGGSGKSQALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFER
Sbjct: 653  LAISVIHGAGGSGKSQALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFER 712

Query: 2230 AFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLA 2409
            AFVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL 
Sbjct: 713  AFVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLP 772

Query: 2410 PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2589
            PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKK
Sbjct: 773  PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKK 832

Query: 2590 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2769
            AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQS
Sbjct: 833  AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQS 892

Query: 2770 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2949
            SAFWEKLEATPYLKTFLSLVRED++ EFS                 VED TTTL DF+E 
Sbjct: 893  SAFWEKLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREE 952

Query: 2950 LSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEE 3129
            L DKFDREIF +AHGHTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEAN+ E
Sbjct: 953  LQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAE 1012

Query: 3130 FRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQS 3309
            FRAKKDLGDILW NY KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQS
Sbjct: 1013 FRAKKDLGDILWENYRKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQS 1072

Query: 3310 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALS 3489
            PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL 
Sbjct: 1073 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALR 1132

Query: 3490 PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 3669
            PNNIMINCEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE
Sbjct: 1133 PNNIMINCEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 1192

Query: 3670 WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGD 3849
            WVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGD
Sbjct: 1193 WVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGD 1252

Query: 3850 DCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 4029
            DCAI+QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS
Sbjct: 1253 DCAISQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 1312

Query: 4030 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFG 4209
            LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFG
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFG 1372

Query: 4210 GSPFL 4224
            GSPFL
Sbjct: 1373 GSPFL 1377


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 2387 bits (6186), Expect = 0.0
 Identities = 1182/1384 (85%), Positives = 1237/1384 (89%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQDT+I RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTIIKRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +
Sbjct: 361  NLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PF +P PVNPDDA+T ++F+ F           +  +L   +E    H SL +    L  
Sbjct: 421  PFARPQPVNPDDAETTQSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCPTLPE 475

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1692
             QL ALHELGN R GGPLLPK                           ++   + + P  
Sbjct: 476  HQLWALHELGNARCGGPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHP 533

Query: 1693 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1872
             DP+TLPWVAWLPKLNALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW  P +++
Sbjct: 534  QDPSTLPWVAWLPKLNALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMAR 593

Query: 1873 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2052
            +L+TLR LNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQ MLTEN   NL
Sbjct: 594  ILSTLRSLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQAMLTENSQTNL 653

Query: 2053 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2232
            AISVIHGAGGSGKSQALQTLLRQ P LPIEVVLPTNELRLDW KKLPHNPPEQFRTFERA
Sbjct: 654  AISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWPKKLPHNPPEQFRTFERA 713

Query: 2233 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2412
            FVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL P
Sbjct: 714  FVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPP 773

Query: 2413 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2592
            AT IFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQP+PG+HLLVPSL+KKA
Sbjct: 774  ATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPRPGLHLLVPSLVKKA 833

Query: 2593 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2772
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 834  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893

Query: 2773 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2952
            AFWEKLEATPYLKTFLSLVREDKIEEF+                 VED TTTL DFKE L
Sbjct: 894  AFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEEL 953

Query: 2953 SDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEF 3132
             DKFDREIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EF
Sbjct: 954  RDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEF 1013

Query: 3133 RAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSP 3312
            RAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSP
Sbjct: 1014 RAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSP 1073

Query: 3313 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP 3492
            DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL P
Sbjct: 1074 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRP 1133

Query: 3493 NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 3672
            NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW
Sbjct: 1134 NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 1193

Query: 3673 VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDD 3852
            VIEGYLDIKLSPKIF+GTL+IMRLTGEGP FDANTECNIAYTHTRF+IPEGTAQIYAGDD
Sbjct: 1194 VIEGYLDIKLSPKIFMGTLTIMRLTGEGPAFDANTECNIAYTHTRFDIPEGTAQIYAGDD 1253

Query: 3853 CAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 4032
            CAIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL
Sbjct: 1254 CAIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 1313

Query: 4033 ELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGG 4212
            ELAKAQKKAGVKDAI+NV+ NYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGG
Sbjct: 1314 ELAKAQKKAGVKDAITNVVDNYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGG 1373

Query: 4213 SPFL 4224
            S FL
Sbjct: 1374 SSFL 1377


>gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 2386 bits (6183), Expect = 0.0
 Identities = 1178/1385 (85%), Positives = 1242/1385 (89%), Gaps = 1/1385 (0%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINS P
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSXP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQ+T+I RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIIKRLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP   T+TA
Sbjct: 181  EALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QR+LRPL S   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPPGF +
Sbjct: 361  NLLQRILRPLTSGATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVDTLLRGPPGFDS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PFT+P PVNPDDA+T  +F+ F           +   LE  AE    H SL++    LS 
Sbjct: 421  PFTRPQPVNPDDAETTHSFQAFCQAAAA-----VETILEQQAETPDEHQSLRLDCPTLSE 475

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGD-HTDEAPV 1689
             QL ALHELGN R GGPLLP+                    T A+   +Q +      P 
Sbjct: 476  HQLWALHELGNARCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPS 532

Query: 1690 NSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLS 1869
              DP TLPWVAWLPKLNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW  P + 
Sbjct: 533  PQDPTTLPWVAWLPKLNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDME 592

Query: 1870 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 2049
            ++++TLR LNR+PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   N
Sbjct: 593  QIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTN 652

Query: 2050 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFER 2229
            LAISVIHGAGGSGKSQALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFER
Sbjct: 653  LAISVIHGAGGSGKSQALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFER 712

Query: 2230 AFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLA 2409
            AFVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL 
Sbjct: 713  AFVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLP 772

Query: 2410 PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2589
            PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKK
Sbjct: 773  PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKK 832

Query: 2590 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2769
            AAFTDAGHK STYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQS
Sbjct: 833  AAFTDAGHKASTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQS 892

Query: 2770 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2949
            SAFWEKLEATPYLKTFLSLVRED++ EFS                 VED TTTL DF+E 
Sbjct: 893  SAFWEKLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREE 952

Query: 2950 LSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEE 3129
            L DKFDREIF +AHGHTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEAN+ E
Sbjct: 953  LQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAE 1012

Query: 3130 FRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQS 3309
            FRAKKDLGDILW NY KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQS
Sbjct: 1013 FRAKKDLGDILWENYRKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQS 1072

Query: 3310 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALS 3489
            PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL 
Sbjct: 1073 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALR 1132

Query: 3490 PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 3669
            PNNIMINCEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE
Sbjct: 1133 PNNIMINCEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 1192

Query: 3670 WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGD 3849
            WVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGD
Sbjct: 1193 WVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGD 1252

Query: 3850 DCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 4029
            DCAI+QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS
Sbjct: 1253 DCAISQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 1312

Query: 4030 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFG 4209
            LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFG
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFG 1372

Query: 4210 GSPFL 4224
            GSPFL
Sbjct: 1373 GSPFL 1377


>gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 2385 bits (6180), Expect = 0.0
 Identities = 1177/1385 (84%), Positives = 1240/1385 (89%), Gaps = 1/1385 (0%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQ+T+I RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIIKRLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP   T+TA
Sbjct: 181  EALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QR+LRPL S   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +
Sbjct: 361  NLLQRILRPLTSGATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PFT+P PVNPDDA+T  +F+ F           +   LE  AE    H SL++    LS 
Sbjct: 421  PFTRPQPVNPDDAETTHSFQAFCQAAAA-----VETILEQQAETPDEHXSLRLDCPTLSE 475

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGD-HTDEAPV 1689
             QL ALHELGN R GGPLLP+                    T A+   +Q +      P 
Sbjct: 476  HQLWALHELGNARCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPS 532

Query: 1690 NSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLS 1869
              DP TLPWVAWLPKLNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW  P + 
Sbjct: 533  PQDPTTLPWVAWLPKLNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDME 592

Query: 1870 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 2049
            ++++TLR LNR+PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   N
Sbjct: 593  QIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTN 652

Query: 2050 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFER 2229
            LAISVIHGAGGSGKSQALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFER
Sbjct: 653  LAISVIHGAGGSGKSQALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFER 712

Query: 2230 AFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLA 2409
            AFVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL 
Sbjct: 713  AFVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLP 772

Query: 2410 PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2589
            PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSL KK
Sbjct: 773  PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLXKK 832

Query: 2590 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2769
            AAFTDAGHK STYAGCQGITAPRVQILLDNDTTMC KEVLYTALSRAVDSIHF+NSNAQS
Sbjct: 833  AAFTDAGHKASTYAGCQGITAPRVQILLDNDTTMCXKEVLYTALSRAVDSIHFINSNAQS 892

Query: 2770 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2949
            SAFWEKLEATPYLKTFLSLVRED++ EFS                 VED TTTL DF+E 
Sbjct: 893  SAFWEKLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREE 952

Query: 2950 LSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEE 3129
            L DKFDREIF +AHGHTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEAN+ E
Sbjct: 953  LQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAE 1012

Query: 3130 FRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQS 3309
            FRAKKDLGDILW NY KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQS
Sbjct: 1013 FRAKKDLGDILWENYRKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQS 1072

Query: 3310 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALS 3489
            PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL 
Sbjct: 1073 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALR 1132

Query: 3490 PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 3669
            PNNIMINCEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE
Sbjct: 1133 PNNIMINCEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 1192

Query: 3670 WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGD 3849
            WVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGD
Sbjct: 1193 WVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGD 1252

Query: 3850 DCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 4029
            DCAI+QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS
Sbjct: 1253 DCAISQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 1312

Query: 4030 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFG 4209
            LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP Q HLHQVTVRDLVKFG
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQXHLHQVTVRDLVKFG 1372

Query: 4210 GSPFL 4224
            GSPFL
Sbjct: 1373 GSPFL 1377


>gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 2385 bits (6180), Expect = 0.0
 Identities = 1177/1385 (84%), Positives = 1241/1385 (89%), Gaps = 1/1385 (0%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQ+T+I RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIIKRLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP   T+TA
Sbjct: 181  EALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSE TLLVNYFE TASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSETTLLVNYFELTASLDSHTCFEDILSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QR+LRPL S   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPP F +
Sbjct: 361  NLLQRILRPLTSGATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVHTLLRGPPWFDS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PFT+P PVNPDDA+T   F+ F           +   LE  AE    H SL++    LS 
Sbjct: 421  PFTRPQPVNPDDAETTHIFQAFCQAAAA-----VETILEQQAETPEEHQSLRLDCPTLSE 475

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGD-HTDEAPV 1689
             QL +LHELGN R GGPLLP+                    T A+   +Q +      P 
Sbjct: 476  HQLWSLHELGNARCGGPLLPQ---RPDTATVVEPCPDLPPETHAAPEPSQRNTQAPNLPS 532

Query: 1690 NSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLS 1869
              DP TLPWVAWLPKLNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW +P + 
Sbjct: 533  PQDPTTLPWVAWLPKLNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQDPDME 592

Query: 1870 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 2049
            ++++TLR LNR+PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   N
Sbjct: 593  QIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTN 652

Query: 2050 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFER 2229
            LAISVIHGAGGSGKSQALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFER
Sbjct: 653  LAISVIHGAGGSGKSQALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFER 712

Query: 2230 AFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLA 2409
            AFVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL 
Sbjct: 713  AFVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLP 772

Query: 2410 PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2589
            PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKK
Sbjct: 773  PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKK 832

Query: 2590 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2769
            AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQS
Sbjct: 833  AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQS 892

Query: 2770 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2949
            SAFWEKLEATPYLKTFLSLVREDK+ EFS                 VED TTTL DF+E 
Sbjct: 893  SAFWEKLEATPYLKTFLSLVREDKVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREE 952

Query: 2950 LSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEE 3129
            L DKFDREIF +AHGHTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEAN+ E
Sbjct: 953  LQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAE 1012

Query: 3130 FRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQS 3309
            FRAKKDLGDILW NY KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQS
Sbjct: 1013 FRAKKDLGDILWENYRKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQS 1072

Query: 3310 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALS 3489
            PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL 
Sbjct: 1073 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALR 1132

Query: 3490 PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 3669
            PNNIMINCEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE
Sbjct: 1133 PNNIMINCEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 1192

Query: 3670 WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGD 3849
            WVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGD
Sbjct: 1193 WVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGD 1252

Query: 3850 DCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 4029
            DCAI+QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS
Sbjct: 1253 DCAISQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 1312

Query: 4030 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFG 4209
            LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFG
Sbjct: 1313 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFG 1372

Query: 4210 GSPFL 4224
            GSPFL
Sbjct: 1373 GSPFL 1377


>gb|AVL84357.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1388

 Score = 2355 bits (6103), Expect = 0.0
 Identities = 1161/1385 (83%), Positives = 1221/1385 (88%), Gaps = 1/1385 (0%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVFSQLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALEALGINSHP
Sbjct: 1    MSNVRNVFSQLTDPSLKAVIQDEAYRVLKRELAQTRHTNPFAQSPEAADALEALGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTH D FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHSDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQ+T+++RLENIPT IAFMGDTLHFLSPSF+TALFAHSP+LQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIVNRLENIPTQIAFMGDTLHFLSPSFLTALFAHSPRLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            EALYR RSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVG LT+P QPTITA
Sbjct: 181  EALYRPRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGRLTSPGQPTITA 240

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNYLTPERRTF T +HYVTVP IFLPE YNCRTPISKT MMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFATNDHYVTVPHIFLPENYNCRTPISKTTMMQMF 300

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTA+LDSHTCFEDVLSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTATLDSHTCFEDVLSG 360

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
            NL+QRLLRPLRSD QR+LQFFRGRPSFVKLIKALDWQPITLEFPVR V T LRGPPGF +
Sbjct: 361  NLLQRLLRPLRSDFQRILQFFRGRPSFVKLIKALDWQPITLEFPVRDVCTTLRGPPGFKS 420

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            P T+P PVNP+DADT R+F++F           + ++L+ +AE L  HT LKV    LS 
Sbjct: 421  PLTRPQPVNPEDADTSRSFQDFTRTTAASPKPTVEETLDATAERLDHHTQLKVHCDTLSE 480

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1692
             QL A+H LG+ R GGPLLP++T                   Q           D  P  
Sbjct: 481  RQLEAIHSLGHLRCGGPLLPELTPRHAPAEPCPDLPPSPTKGQTETPSPSTSGPDLQPTT 540

Query: 1693 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1872
              P TLPWVAWLPKLNALGFEALE+Q DPSTGE+IMPI D R+LP+ATLP HW    L+ 
Sbjct: 541  QAPETLPWVAWLPKLNALGFEALEVQHDPSTGEMIMPITDTRELPRATLPAHWQGSNLTS 600

Query: 1873 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2052
            +LTTLR LNRFPTPW PDR RARAFTSDVKNSRTGKALHRE+QTWKETQT+L EN    L
Sbjct: 601  ILTTLRSLNRFPTPWIPDRTRARAFTSDVKNSRTGKALHRESQTWKETQTLLAENTQVEL 660

Query: 2053 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2232
            A+SVIHGAGGSGKSQALQTLLRQ+P LPIEV+LPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 661  ALSVIHGAGGSGKSQALQTLLRQDPSLPIEVILPTNELRLDWLKKLPHNPPEQFRTFERA 720

Query: 2233 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2412
            FVCS+SPVVIFDDYGKLPQGY+EAFA+THA+LELVILTG P+              K +P
Sbjct: 721  FVCSQSPVVIFDDYGKLPQGYLEAFALTHANLELVILTGGPQAVHAPRVQRGGAHLKASP 780

Query: 2413 -ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2589
                     SRYYINATHRNSKFLANKLGVYS+NSCPL VTYGFQP PG+HLLVPSLMKK
Sbjct: 781  RPQPSIQPFSRYYINATHRNSKFLANKLGVYSANSCPLNVTYGFQPLPGLHLLVPSLMKK 840

Query: 2590 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2769
            AAFTDAGHKVSTYAGCQGITAP+VQILLD+DTTMCTKEVLYTALSRAVDSIHFVNSNAQS
Sbjct: 841  AAFTDAGHKVSTYAGCQGITAPKVQILLDSDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 900

Query: 2770 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2949
            SAFWEKLEATPYLKTFLSLVREDKI EF                  VE+  TTL DFKE 
Sbjct: 901  SAFWEKLEATPYLKTFLSLVREDKITEFQAPEGDPKPVAPPVTHFPVEEPATTLDDFKEE 960

Query: 2950 LSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEE 3129
            L DKFDREIFT   GHTNCVQ DDPTTQLFSHQQAKDEALLW TIKARLTISTPEAN+EE
Sbjct: 961  LQDKFDREIFTNDRGHTNCVQTDDPTTQLFSHQQAKDEALLWGTIKARLTISTPEANVEE 1020

Query: 3130 FRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQS 3309
            FRAKKDLGDILW NYH+AM LPKEQP+FSEDLWTRCAEEVQNTYLKK++ Q+KGGERRQS
Sbjct: 1021 FRAKKDLGDILWVNYHRAMGLPKEQPDFSEDLWTRCAEEVQNTYLKKTVAQLKGGERRQS 1080

Query: 3310 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALS 3489
            PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL 
Sbjct: 1081 PDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALC 1140

Query: 3490 PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 3669
            PNNIM+NCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE
Sbjct: 1141 PNNIMVNCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPE 1200

Query: 3670 WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGD 3849
            WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTE NIAYTHTRF+IPEGTAQIYAGD
Sbjct: 1201 WVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTERNIAYTHTRFDIPEGTAQIYAGD 1260

Query: 3850 DCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 4029
            DCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS
Sbjct: 1261 DCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 1320

Query: 4030 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFG 4209
            LELAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFG
Sbjct: 1321 LELAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFG 1380

Query: 4210 GSPFL 4224
            GSPFL
Sbjct: 1381 GSPFL 1385


>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
 sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA replication protein; AltName: Full=156 kDa protein;
            AltName: Full=ORF1 protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase
 emb|CAA79761.1| 156K-protein [Plantago asiatica mosaic virus]
          Length = 1385

 Score = 2313 bits (5993), Expect = 0.0
 Identities = 1149/1384 (83%), Positives = 1215/1384 (87%)
 Frame = +1

Query: 73   MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 252
            MSNVRNVFSQLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALEALGINSHP
Sbjct: 1    MSNVRNVFSQLTDPSLKAVIQDEAYRVLKRELAQTRHTNPFAQSPEAADALEALGINSHP 60

Query: 253  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 432
            YAIT HTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGD FLNAHV
Sbjct: 61   YAITSHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDHFLNAHV 120

Query: 433  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 612
            EPKDVPRYPQ+T+I+RL +IPT IAFMGDTLHFLSPSF+TALFAHSP+LQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIINRLADIPTQIAFMGDTLHFLSPSFLTALFAHSPRLQTLYATLVLPP 180

Query: 613  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 792
            E     RSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAP  PT+TA
Sbjct: 181  EPSTS-RSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPGCPTVTA 239

Query: 793  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 972
            QRLETKGANHLFIFQRGNY+TPERRTF T + YVTVP IFLPE YNCRTPISKT MMQMF
Sbjct: 240  QRLETKGANHLFIFQRGNYITPERRTFATNDQYVTVPHIFLPENYNCRTPISKTTMMQMF 299

Query: 973  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1152
            FYIKS KEA+      + +QLISTKELQHYQPSEITLLVNYFEFTA+LDSHTCFEDV   
Sbjct: 300  FYIKSGKEAQREGHLGQVQQLISTKELQHYQPSEITLLVNYFEFTATLDSHTCFEDV-PP 358

Query: 1153 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1332
             L  +        I R+LQFFRGRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF N
Sbjct: 359  KLAPKTTPAPPLGISRILQFFRGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKN 418

Query: 1333 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1512
            PFT+P PVNP+DAD    F++F           +   LE SAE+   HT LKV  + LS 
Sbjct: 419  PFTQPQPVNPEDADISSRFQDFSRATNSTPKPTVEAVLEASAESPDHHTQLKVLCSALSE 478

Query: 1513 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1692
             QL A+H LG++R GGPLLP++T                  +QAS + +     D  P  
Sbjct: 479  GQLEAIHALGHSRCGGPLLPELTAKSTPVEQCPDLPPCPTKSQASPASSNPSGPDAQPTA 538

Query: 1693 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1872
             +P TLPWVAWLPKLNALGFEALE+Q DPSTGE+IMPI D ++LP+ATLP HW    L +
Sbjct: 539  QNPETLPWVAWLPKLNALGFEALEVQHDPSTGEMIMPITDTQELPRATLPAHWQGHNLER 598

Query: 1873 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2052
            +L+TLR LNRFPTPW PDR RARAFTSDVKNSRTGKALHRE+QTWKETQTMLTEN    L
Sbjct: 599  ILSTLRSLNRFPTPWSPDRTRARAFTSDVKNSRTGKALHRESQTWKETQTMLTENTQTEL 658

Query: 2053 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2232
            AISVIHGAGGSGKSQALQTLLRQ+  LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 659  AISVIHGAGGSGKSQALQTLLRQDHSLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 718

Query: 2233 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2412
            FV S SPVVIFDDYGKLPQGY+EAFA+THA+LELVILTGDPRQSTHHE+NEEALISKL P
Sbjct: 719  FVSSHSPVVIFDDYGKLPQGYLEAFALTHANLELVILTGDPRQSTHHESNEEALISKLPP 778

Query: 2413 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2592
            ATTI+S  SRYYINAT RNSKFLANKLGVYS+NSCPL VTYGFQP PG+HLLVPSLMKKA
Sbjct: 779  ATTIYSAFSRYYINATLRNSKFLANKLGVYSANSCPLNVTYGFQPLPGLHLLVPSLMKKA 838

Query: 2593 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2772
            AFTDAGHKVS+YAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVN+NAQSS
Sbjct: 839  AFTDAGHKVSSYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNTNAQSS 898

Query: 2773 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2952
            AFWEKLEATPYLKTFLSLVREDKI EF                  VE+  TTL DFKE L
Sbjct: 899  AFWEKLEATPYLKTFLSLVREDKITEFQAPADAPKPVTPPVTHFPVEEPATTLDDFKEEL 958

Query: 2953 SDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEF 3132
             DKFDREIFT   GHTNCVQ DDPTTQLFSHQQAKDEALLWE I+ARL ISTPEANIEEF
Sbjct: 959  RDKFDREIFTSDRGHTNCVQTDDPTTQLFSHQQAKDEALLWEMIRARLKISTPEANIEEF 1018

Query: 3133 RAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSP 3312
            RAKKDLGDILW NYH+AM LPKEQP+FSEDLW RCAEEVQNTYLKK++ Q+KGGERRQSP
Sbjct: 1019 RAKKDLGDILWVNYHRAMGLPKEQPDFSEDLWNRCAEEVQNTYLKKTMAQLKGGERRQSP 1078

Query: 3313 DFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP 3492
            DFHEHQILIFLKSQWVKKMEKLGAK+IKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP
Sbjct: 1079 DFHEHQILIFLKSQWVKKMEKLGAKEIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSP 1138

Query: 3493 NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 3672
            NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW
Sbjct: 1139 NNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEW 1198

Query: 3673 VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDD 3852
            VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDD
Sbjct: 1199 VIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDD 1258

Query: 3853 CAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 4032
            CAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL
Sbjct: 1259 CAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASL 1318

Query: 4033 ELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGG 4212
            ELAKAQKKAGV+DAI+NV+ANYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGG
Sbjct: 1319 ELAKAQKKAGVRDAITNVVANYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGG 1378

Query: 4213 SPFL 4224
            SPFL
Sbjct: 1379 SPFL 1382