BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00035197
         (426 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009129359.1| ribosomal protein S2 (chloroplast) [Cypriped...   150   3e-42
gb|OTG02546.1| putative ribosomal protein S2, flavodoxin-like do...   137   2e-39
gb|AID16287.1| ribosomal protein S2, partial (chloroplast) [Cent...   137   3e-39
gb|OTF84549.1| putative ribosomal protein S2, flavodoxin-like do...   137   3e-39
emb|CAD45096.2| ribosomal protein S2 (chloroplast) [Amborella tr...   142   3e-39
gb|OTF84324.1| putative ribosomal protein S2, flavodoxin-like do...   141   4e-39
gb|ERN02618.1| hypothetical protein AMTR_s00390p00012910 [Ambore...   149   7e-39
ref|YP_009254204.1| ribosomal protein S2 (chloroplast) [Erythran...   139   1e-38
dbj|BAC77547.1| ribosomal protein S2, partial (chloroplast) [Nic...   139   2e-38
gb|ALI91211.1| Rps2, partial (chloroplast) [Cordia sebestena]         139   3e-38
ref|YP_009456299.1| ribosomal protein S2 (chloroplast) [Ambrosia...   139   3e-38
ref|YP_009353931.1| ribosomal protein S2 (chloroplast) [Rehmanni...   139   3e-38
ref|YP_009344425.1| ribosomal protein S2 (chloroplast) [Rehmanni...   139   3e-38
gb|AKZ23969.1| ribosomal protein S2 (plastid) [Ellisia nyctelea]      139   3e-38
dbj|BAC77570.1| ribosomal protein S2 (chloroplast) [Nicotiana to...   139   3e-38
gb|AII18654.1| ribosomal protein S2, partial (chloroplast) [Vibu...   139   3e-38
gb|AEX99504.1| ribosomal protein S2 (chloroplast) [Chrysanthemum...   139   3e-38
ref|YP_007353756.1| ribosomal protein S2 (chloroplast) [Chrysant...   139   3e-38
ref|WP_082924815.1| 30S ribosomal protein S2, partial [Paenarthr...   139   3e-38
ref|YP_009270901.1| ribosomal protein S2 (chloroplast) [Perilla ...   138   4e-38

>ref|YP_009129359.1| ribosomal protein S2 (chloroplast) [Cypripedium formosanum]
 gb|AHZ43000.1| ribosomal protein S2 (chloroplast) [Cypripedium formosanum]
 dbj|BBD13789.1| 30S ribosomal protein S2, partial (chloroplast) [Cypripedium
           japonicum]
          Length = 267

 Score =  150 bits (378), Expect = 3e-42
 Identities = 74/93 (79%), Positives = 79/93 (84%)
 Frame = +2

Query: 146 RRFHRNNYLFQFRVPRLFFLKGEVWGEMTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAP 325
           RRF RNNYLF  RV  LF    E  G+M RRYWNINLEEM+EAGVHFGHGT+KWNP+MAP
Sbjct: 6   RRFRRNNYLFH-RVLNLFEKNKEKCGKMGRRYWNINLEEMMEAGVHFGHGTKKWNPRMAP 64

Query: 326 YISAKRKGIHIINLTRTARFLSEACDLVFDSAS 424
           YISAKRKGIHI NLT TARFLSEACDLVFD+AS
Sbjct: 65  YISAKRKGIHITNLTITARFLSEACDLVFDAAS 97


>gb|OTG02546.1| putative ribosomal protein S2, flavodoxin-like domain protein
           [Helianthus annuus]
          Length = 82

 Score =  137 bits (344), Expect = 2e-39
 Identities = 63/66 (95%), Positives = 65/66 (98%)
 Frame = +2

Query: 227 MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 406
           MTRRYWNINLEEM+EAGVHFGHGTRKWNPKMAPYISAKRKGIHI NLTRTARFLSEACDL
Sbjct: 1   MTRRYWNINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDL 60

Query: 407 VFDSAS 424
           VFD+AS
Sbjct: 61  VFDAAS 66


>gb|AID16287.1| ribosomal protein S2, partial (chloroplast) [Centaurea cyanus]
          Length = 101

 Score =  137 bits (344), Expect = 3e-39
 Identities = 63/66 (95%), Positives = 65/66 (98%)
 Frame = +2

Query: 227 MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 406
           MTRRYWNINLEEM+EAGVHFGHGTRKWNPKMAPYISAKRKGIHI NLTRTARFLSEACDL
Sbjct: 1   MTRRYWNINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDL 60

Query: 407 VFDSAS 424
           VFD+AS
Sbjct: 61  VFDAAS 66


>gb|OTF84549.1| putative ribosomal protein S2, flavodoxin-like domain protein
           [Helianthus annuus]
          Length = 104

 Score =  137 bits (344), Expect = 3e-39
 Identities = 63/66 (95%), Positives = 65/66 (98%)
 Frame = +2

Query: 227 MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 406
           MTRRYWNINLEEM+EAGVHFGHGTRKWNPKMAPYISAKRKGIHI NLTRTARFLSEACDL
Sbjct: 1   MTRRYWNINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDL 60

Query: 407 VFDSAS 424
           VFD+AS
Sbjct: 61  VFDAAS 66


>emb|CAD45096.2| ribosomal protein S2 (chloroplast) [Amborella trichopoda]
          Length = 275

 Score =  142 bits (358), Expect = 3e-39
 Identities = 69/92 (75%), Positives = 75/92 (81%)
 Frame = +2

Query: 149 RFHRNNYLFQFRVPRLFFLKGEVWGEMTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPY 328
           RF RNN +FQ     +   K EVW EM RRYW+INLEEM+ AGVHFGHGTRKWNP+MAPY
Sbjct: 14  RFRRNNSIFQISGYLIPEKKEEVWVEMARRYWDINLEEMMGAGVHFGHGTRKWNPRMAPY 73

Query: 329 ISAKRKGIHIINLTRTARFLSEACDLVFDSAS 424
           IS KRKGIHI NLTRTAR LSEACDLVFD+AS
Sbjct: 74  ISGKRKGIHITNLTRTARPLSEACDLVFDAAS 105


>gb|OTF84324.1| putative ribosomal protein S2, flavodoxin-like domain protein
           [Helianthus annuus]
          Length = 239

 Score =  141 bits (355), Expect = 4e-39
 Identities = 65/68 (95%), Positives = 67/68 (98%)
 Frame = +2

Query: 221 GEMTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEAC 400
           GEMTRRYWNINLEEM+EAGVHFGHGTRKWNPKMAPYISAKRKGIHI NLTRTARFLSEAC
Sbjct: 2   GEMTRRYWNINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEAC 61

Query: 401 DLVFDSAS 424
           DLVFD+AS
Sbjct: 62  DLVFDAAS 69


>gb|ERN02618.1| hypothetical protein AMTR_s00390p00012910 [Amborella trichopoda]
          Length = 1733

 Score =  149 bits (376), Expect = 7e-39
 Identities = 75/101 (74%), Positives = 82/101 (81%), Gaps = 10/101 (9%)
 Frame = +2

Query: 152  FHRNNYLFQFRVPR-----LFFL-----KGEVWGEMTRRYWNINLEEMLEAGVHFGHGTR 301
            FH    LF F + +     LFF      + EVWGEMTRRYWNINLEEM+EAGVHFGHGT+
Sbjct: 1335 FHHRE-LFSFCISKNGTSSLFFTLKKKKREEVWGEMTRRYWNINLEEMMEAGVHFGHGTK 1393

Query: 302  KWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDSAS 424
            KWNP+MAPYISAKRKGIHIINLTRTARFLSEACDLVFD+AS
Sbjct: 1394 KWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 1434


>ref|YP_009254204.1| ribosomal protein S2 (chloroplast) [Erythranthe lutea]
 gb|ANC62904.1| ribosomal protein S2 (chloroplast) [Erythranthe lutea]
          Length = 236

 Score =  139 bits (351), Expect = 1e-38
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = +2

Query: 227 MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 406
           MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL
Sbjct: 1   MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 60

Query: 407 VFDSAS 424
           VFD+AS
Sbjct: 61  VFDAAS 66


>dbj|BAC77547.1| ribosomal protein S2, partial (chloroplast) [Nicotiana sylvestris]
          Length = 222

 Score =  139 bits (349), Expect = 2e-38
 Identities = 64/66 (96%), Positives = 66/66 (100%)
 Frame = +2

Query: 227 MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 406
           MTRRYWNINLEEM+EAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL
Sbjct: 1   MTRRYWNINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 60

Query: 407 VFDSAS 424
           VFD+AS
Sbjct: 61  VFDAAS 66


>gb|ALI91211.1| Rps2, partial (chloroplast) [Cordia sebestena]
          Length = 235

 Score =  139 bits (349), Expect = 3e-38
 Identities = 64/66 (96%), Positives = 66/66 (100%)
 Frame = +2

Query: 227 MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 406
           MTRRYWNINLEEM+EAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL
Sbjct: 1   MTRRYWNINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 60

Query: 407 VFDSAS 424
           VFD+AS
Sbjct: 61  VFDAAS 66


>ref|YP_009456299.1| ribosomal protein S2 (chloroplast) [Ambrosia trifida]
 gb|AUJ22599.1| ribosomal protein S2 (chloroplast) [Ambrosia artemisiifolia]
 gb|AUJ22686.1| ribosomal protein S2 (chloroplast) [Ambrosia trifida]
          Length = 236

 Score =  139 bits (349), Expect = 3e-38
 Identities = 64/66 (96%), Positives = 66/66 (100%)
 Frame = +2

Query: 227 MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 406
           MTRRYWNINLEEM+EAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL
Sbjct: 1   MTRRYWNINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 60

Query: 407 VFDSAS 424
           VFD+AS
Sbjct: 61  VFDAAS 66


>ref|YP_009353931.1| ribosomal protein S2 (chloroplast) [Rehmannia glutinosa]
 ref|YP_009354019.1| ribosomal protein S2 (chloroplast) [Rehmannia henryi]
 ref|YP_009354106.1| ribosomal protein S2 (chloroplast) [Rehmannia solanifolia]
 ref|YP_009354194.1| ribosomal protein S2 (chloroplast) [Rehmannia piasezkii]
 gb|AQZ40509.1| ribosomal protein S2 (chloroplast) [Rehmannia glutinosa]
 gb|AQZ40596.1| ribosomal protein S2 (chloroplast) [Rehmannia henryi]
 gb|AQZ40684.1| ribosomal protein S2 (chloroplast) [Rehmannia solanifolia]
 gb|AQZ40771.1| ribosomal protein S2 (chloroplast) [Rehmannia piasezkii]
          Length = 236

 Score =  139 bits (349), Expect = 3e-38
 Identities = 65/66 (98%), Positives = 65/66 (98%)
 Frame = +2

Query: 227 MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 406
           MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHI NLTRTARFLSEACDL
Sbjct: 1   MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDL 60

Query: 407 VFDSAS 424
           VFDSAS
Sbjct: 61  VFDSAS 66


>ref|YP_009344425.1| ribosomal protein S2 (chloroplast) [Rehmannia chingii]
 ref|YP_009354281.1| ribosomal protein S2 (chloroplast) [Rehmannia elata]
 gb|APT42268.1| ribosomal protein S2 (chloroplast) [Rehmannia chingii]
 gb|AQZ40858.1| ribosomal protein S2 (chloroplast) [Rehmannia elata]
          Length = 236

 Score =  139 bits (349), Expect = 3e-38
 Identities = 65/66 (98%), Positives = 65/66 (98%)
 Frame = +2

Query: 227 MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 406
           MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHI NLTRTARFLSEACDL
Sbjct: 1   MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDL 60

Query: 407 VFDSAS 424
           VFDSAS
Sbjct: 61  VFDSAS 66


>gb|AKZ23969.1| ribosomal protein S2 (plastid) [Ellisia nyctelea]
          Length = 236

 Score =  139 bits (349), Expect = 3e-38
 Identities = 64/66 (96%), Positives = 66/66 (100%)
 Frame = +2

Query: 227 MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 406
           MTRRYWNINLEEM+EAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL
Sbjct: 1   MTRRYWNINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 60

Query: 407 VFDSAS 424
           VFD+AS
Sbjct: 61  VFDAAS 66


>dbj|BAC77570.1| ribosomal protein S2 (chloroplast) [Nicotiana tomentosiformis]
          Length = 236

 Score =  139 bits (349), Expect = 3e-38
 Identities = 64/66 (96%), Positives = 66/66 (100%)
 Frame = +2

Query: 227 MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 406
           MTRRYWNINLEEM+EAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL
Sbjct: 1   MTRRYWNINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 60

Query: 407 VFDSAS 424
           VFD+AS
Sbjct: 61  VFDAAS 66


>gb|AII18654.1| ribosomal protein S2, partial (chloroplast) [Viburnum lutescens]
          Length = 236

 Score =  139 bits (349), Expect = 3e-38
 Identities = 64/66 (96%), Positives = 66/66 (100%)
 Frame = +2

Query: 227 MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 406
           MTRRYWNINLEEM+EAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL
Sbjct: 1   MTRRYWNINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 60

Query: 407 VFDSAS 424
           VFD+AS
Sbjct: 61  VFDAAS 66


>gb|AEX99504.1| ribosomal protein S2 (chloroplast) [Chrysanthemum indicum]
          Length = 236

 Score =  139 bits (349), Expect = 3e-38
 Identities = 64/66 (96%), Positives = 66/66 (100%)
 Frame = +2

Query: 227 MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 406
           MTRRYWNINLEEM+EAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL
Sbjct: 1   MTRRYWNINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 60

Query: 407 VFDSAS 424
           VFD+AS
Sbjct: 61  VFDAAS 66


>ref|YP_007353756.1| ribosomal protein S2 (chloroplast) [Chrysanthemum x morifolium]
 ref|YP_007474719.1| ribosomal protein S2 (chloroplast) [Chrysanthemum indicum]
 ref|YP_009272067.1| ribosomal protein S2 (chloroplast) [Artemisia argyi]
 ref|YP_009307742.1| ribosomal protein S2 (chloroplast) [Artemisia gmelinii]
 ref|YP_009307830.1| ribosomal protein S2 (chloroplast) [Artemisia capillaris]
 ref|YP_009365231.1| chloroplast 30S ribosomal protein S2 (plastid) [Artemisia annua]
 gb|AEX99268.1| ribosomal protein S2 (chloroplast) [Chrysanthemum indicum]
 gb|AFA45264.1| ribosomal protein S2 (chloroplast) [Chrysanthemum x morifolium]
 gb|AJB98618.1| ribosomal protein S2 (chloroplast) [Artemisia argyi]
 gb|AJE74936.1| ribosomal protein S2 (plastid) [Achillea millefolium]
 gb|ANS11247.1| ribosomal protein S2 (chloroplast) [Artemisia fukudo]
 gb|AOR82576.1| ribosomal protein S2 (chloroplast) [Artemisia gmelinii]
 gb|AOR82664.1| ribosomal protein S2 (chloroplast) [Artemisia capillaris]
 gb|ARJ60777.1| chloroplast 30S ribosomal protein S2 (plastid) [Artemisia annua]
 gb|ARU07800.1| ribosomal protein S2 (chloroplast) [Artemisia gmelinii]
 gb|ARU07888.1| ribosomal protein S2 (chloroplast) [Artemisia capillaris]
 gb|ATL16638.1| ribosomal protein S2 (chloroplast) [Artemisia argyrophylla]
 gb|ATL16898.1| ribosomal protein S2 (chloroplast) [Chrysanthemum zawadskii var.
           latilobum]
 gb|ATL16960.1| ribosomal protein S2 (chloroplast) [Chrysanthemum zawadskii subsp.
           coreanum]
 gb|ATU84307.1| ribosomal protein S2 (chloroplast) [Artemisia annua]
 gb|AVI25899.1| ribosomal protein S2 (chloroplast) [Chrysanthemum boreale]
          Length = 236

 Score =  139 bits (349), Expect = 3e-38
 Identities = 64/66 (96%), Positives = 66/66 (100%)
 Frame = +2

Query: 227 MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 406
           MTRRYWNINLEEM+EAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL
Sbjct: 1   MTRRYWNINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 60

Query: 407 VFDSAS 424
           VFD+AS
Sbjct: 61  VFDAAS 66


>ref|WP_082924815.1| 30S ribosomal protein S2, partial [Paenarthrobacter nicotinovorans]
          Length = 240

 Score =  139 bits (349), Expect = 3e-38
 Identities = 63/68 (92%), Positives = 67/68 (98%)
 Frame = +2

Query: 221 GEMTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEAC 400
           GEMTRRYWNINLEEM+EAGVHFGHGTRKWNP+MAPYISAKRKGIHI NLT+TARFLSEAC
Sbjct: 3   GEMTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTKTARFLSEAC 62

Query: 401 DLVFDSAS 424
           DLVFD+AS
Sbjct: 63  DLVFDAAS 70


>ref|YP_009270901.1| ribosomal protein S2 (chloroplast) [Perilla setoyensis]
 ref|YP_009270725.1| ribosomal protein S2 (chloroplast) [Perilla citriodora]
 ref|YP_009270813.1| ribosomal protein S2 (chloroplast) [Perilla frutescens]
 gb|AKJ77760.1| ribosomal protein S2 (chloroplast) [Perilla frutescens]
 gb|AMR74097.1| ribosomal protein S2 (chloroplast) [Perilla frutescens]
 gb|AMR74185.1| ribosomal protein S2 (chloroplast) [Perilla frutescens var. acuta]
 gb|AMR74273.1| ribosomal protein S2 (chloroplast) [Perilla frutescens f.
           crispidiscolor]
 gb|AMR74361.1| ribosomal protein S2 (chloroplast) [Perilla frutescens var. crispa]
 gb|AMR74449.1| ribosomal protein S2 (chloroplast) [Perilla frutescens var. crispa]
 gb|AMR74537.1| ribosomal protein S2 (chloroplast) [Perilla frutescens var.
           frutescens]
 gb|AMR74625.1| ribosomal protein S2 (chloroplast) [Perilla citriodora]
 gb|AMR74713.1| ribosomal protein S2 (chloroplast) [Perilla frutescens var.
           hirtella]
 gb|AMR74801.1| ribosomal protein S2 (chloroplast) [Perilla setoyensis]
          Length = 236

 Score =  138 bits (348), Expect = 4e-38
 Identities = 64/66 (96%), Positives = 66/66 (100%)
 Frame = +2

Query: 227 MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDL 406
           MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLT+TARFLSEACDL
Sbjct: 1   MTRRYWNINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTKTARFLSEACDL 60

Query: 407 VFDSAS 424
           VFD+AS
Sbjct: 61  VFDAAS 66