BLASTX nr result
ID: Rehmannia30_contig00035154
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00035154
(534 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PON91412.1| Zinc finger, CCHC-type, partial [Trema orientalis] 64 9e-11
gb|PON45986.1| Zinc finger, CCHC-type [Parasponia andersonii] 58 4e-09
gb|PON65458.1| Zinc finger, CCHC-type, partial [Trema orientalis] 52 6e-08
gb|PON33922.1| hypothetical protein TorRG33x02_354190, partial [... 54 4e-06
ref|XP_018824999.1| PREDICTED: uncharacterized protein LOC108994... 56 6e-06
ref|XP_018828324.1| PREDICTED: uncharacterized protein LOC108996... 53 7e-06
ref|XP_018810328.1| PREDICTED: uncharacterized protein LOC108983... 54 7e-06
gb|PON99208.1| Zinc finger, CCHC-type, partial [Trema orientalis] 53 9e-06
>gb|PON91412.1| Zinc finger, CCHC-type, partial [Trema orientalis]
Length = 414
Score = 63.5 bits (153), Expect(2) = 9e-11
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +2
Query: 227 KPTCQLCGKPNHVALKCFKRFDMSFTGPIEATSTPDSPHAFVAGVDT-SPMPDPTGILIV 403
KP CQ+CGK H+ALKC+ RFD+SF G ++STP + A A V T + + D +
Sbjct: 230 KPVCQVCGKAGHIALKCYHRFDLSFQGDSSSSSTPQANQANQAFVTTNTAVNDGAWYMDS 289
Query: 404 ELQIYVTASMDNLSLNASQYQG 469
+VTA + NL+L A Y+G
Sbjct: 290 GATNHVTADLSNLALQA-DYKG 310
Score = 30.4 bits (67), Expect(2) = 9e-11
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 465 KAQLTMGNGSSLNISHTGSSLV 530
K +L +GNGS L+ISH GSS +
Sbjct: 311 KEKLAVGNGSQLSISHIGSSQI 332
>gb|PON45986.1| Zinc finger, CCHC-type [Parasponia andersonii]
Length = 135
Score = 58.2 bits (139), Expect(2) = 4e-09
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +2
Query: 227 KPTCQLCGKPNHVALKCFKRFDMSFTGPIEATSTPDSPHAFVAGVDT-SPMPDPTGILIV 403
KP CQ+CGK H+ALKC+ RFD+SF G ++ST + A A V T + + D +
Sbjct: 8 KPVCQVCGKAGHIALKCYHRFDLSFQGDSSSSSTLQANQANQAFVATNTAVNDGAWYMDS 67
Query: 404 ELQIYVTASMDNLSLNASQYQG 469
+VTA + NL L A Y+G
Sbjct: 68 GATNHVTADLSNLVLQA-DYKG 88
Score = 30.4 bits (67), Expect(2) = 4e-09
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 465 KAQLTMGNGSSLNISHTGSSLV 530
K + T+GNGS L+ISH GSS +
Sbjct: 89 KQKFTVGNGSQLSISHFGSSQI 110
>gb|PON65458.1| Zinc finger, CCHC-type, partial [Trema orientalis]
Length = 374
Score = 52.0 bits (123), Expect(3) = 6e-08
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 4/47 (8%)
Frame = +2
Query: 227 KPTCQLCGKPNHVALKCFKRFDMSFTGPI---EATSTPDSPH-AFVA 355
KP CQ+CGK H+A+KC+ RFD+S+ GP +T P SP+ A++A
Sbjct: 123 KPICQVCGKAGHIAIKCYHRFDLSYQGPDTSGSSTQQPASPNQAYIA 169
Score = 28.1 bits (61), Expect(3) = 6e-08
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 465 KAQLTMGNGSSLNISHTGSSL 527
K +L +GNGS L I H GSS+
Sbjct: 205 KEKLAVGNGSQLPIKHIGSSI 225
Score = 23.5 bits (49), Expect(3) = 6e-08
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 388 WYFDSGATN 414
WY DSGATN
Sbjct: 179 WYMDSGATN 187
>gb|PON33922.1| hypothetical protein TorRG33x02_354190, partial [Trema orientalis]
Length = 108
Score = 53.5 bits (127), Expect = 4e-06
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = +2
Query: 227 KPTCQLCGKPNHVALKCFKRFDMSFTGPIEATSTPDSPHAFVA 355
KP CQLCGKP H LKCF +FD SF GP ++ A VA
Sbjct: 50 KPQCQLCGKPRHTGLKCFHQFDYSFLGPASNPASTSHSSAMVA 92
>ref|XP_018824999.1| PREDICTED: uncharacterized protein LOC108994317 [Juglans regia]
Length = 339
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 227 KPTCQLCGKPNHVALKCFKRFDMSFTGPIEATSTPDSPHAFVAGVDTS-PMPDPTGILIV 403
KPTCQ+CGK H A+KCF RFD ++ D P A +S PD + L
Sbjct: 111 KPTCQVCGKVGHSAIKCFYRFDYAYQS--------DPPRNLTANYSSSCASPDQSWYLDT 162
Query: 404 ELQIYVTASMDNLSLNASQYQGSAY 478
++T+ M NL+L + Y G+ +
Sbjct: 163 AATNHITSDMSNLNLTSGPYGGNEH 187
>ref|XP_018828324.1| PREDICTED: uncharacterized protein LOC108996762 [Juglans regia]
Length = 477
Score = 52.8 bits (125), Expect(2) = 7e-06
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = +2
Query: 227 KPTCQLCGKPNHVALKCFKRFDMSFTGPIEATSTPDSPHAFVAGVDTSPMPDPTGILIVE 406
+P CQ+C KP H+A C+ R+D S+ P AT A + + SP T
Sbjct: 273 RPMCQVCNKPGHMAAACYHRYDHSYPTPPPATFA-----ANYSALTASPSSSHTWFPDTA 327
Query: 407 LQIYVTASMDNLSLNASQYQGS 472
+ TA ++NL++++S YQGS
Sbjct: 328 ATHHFTADINNLNVDSSVYQGS 349
Score = 24.6 bits (52), Expect(2) = 7e-06
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +3
Query: 471 QLTMGNGSSLNISHTGSS 524
Q+++G+GSS+ I H GS+
Sbjct: 351 QVSIGDGSSIPIQHVGSA 368
>ref|XP_018810328.1| PREDICTED: uncharacterized protein LOC108983217 [Juglans regia]
Length = 384
Score = 53.9 bits (128), Expect(2) = 7e-06
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +2
Query: 227 KPTCQLCGKPNHVALKCFKRFDMSFT-GPIEATSTPDSPHAFVAGVDTSPMP-DPTGILI 400
KPTCQ+C K HVAL+C RFD ++ GP P +F A TS P D T
Sbjct: 280 KPTCQVCNKVGHVALQCLHRFDQAYQHGP---------PRSFSAHYTTSQSPSDQTWYPD 330
Query: 401 VELQIYVTASMDNLSLNASQYQG 469
++T+ ++NL++NA Y G
Sbjct: 331 SAATNHLTSDLNNLNINADHYPG 353
Score = 23.5 bits (49), Expect(2) = 7e-06
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 471 QLTMGNGSSLNISHTGSS 524
Q+ +G+GSSL I+H G +
Sbjct: 356 QIRVGDGSSLPITHIGQT 373
>gb|PON99208.1| Zinc finger, CCHC-type, partial [Trema orientalis]
Length = 115
Score = 52.8 bits (125), Expect = 9e-06
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +2
Query: 227 KPTCQLCGKPNHVALKCFKRFDMSFTGPIEATSTPDSPHAFVAGVDTSPMPDPTGI 394
KP CQ+CGK H+A+KC+ RFD+S+ GP + S+ P A + + + PTG+
Sbjct: 45 KPICQVCGKAGHIAIKCYHRFDLSYQGPDTSGSSTRQP----ASPNQAYIATPTGV 96