BLASTX nr result
ID: Rehmannia30_contig00034306
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00034306
(566 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_019071772.1| PREDICTED: pentatricopeptide repeat-containi... 79 8e-14
emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera] 78 2e-13
ref|XP_022867313.1| pentatricopeptide repeat-containing protein ... 75 2e-12
gb|PON93983.1| DYW domain containing protein [Trema orientalis] 75 2e-12
gb|PON60614.1| DYW domain containing protein [Parasponia anderso... 75 2e-12
ref|XP_022144168.1| pentatricopeptide repeat-containing protein ... 74 4e-12
ref|XP_022144167.1| pentatricopeptide repeat-containing protein ... 74 4e-12
ref|XP_020965338.1| pentatricopeptide repeat-containing protein ... 73 1e-11
dbj|GAV56689.1| PPR domain-containing protein/PPR_2 domain-conta... 73 1e-11
ref|XP_016170528.1| pentatricopeptide repeat-containing protein ... 73 1e-11
ref|XP_008237749.1| PREDICTED: pentatricopeptide repeat-containi... 72 2e-11
ref|XP_021284757.1| pentatricopeptide repeat-containing protein ... 72 4e-11
ref|XP_008445305.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 72 4e-11
ref|XP_015936776.1| pentatricopeptide repeat-containing protein ... 71 5e-11
ref|XP_022752063.1| pentatricopeptide repeat-containing protein ... 71 7e-11
ref|XP_007017936.2| PREDICTED: pentatricopeptide repeat-containi... 71 7e-11
gb|EOY15161.1| Tetratricopeptide repeat (TPR)-like superfamily p... 71 7e-11
ref|XP_004514844.1| PREDICTED: pentatricopeptide repeat-containi... 71 7e-11
ref|XP_007200084.2| pentatricopeptide repeat-containing protein ... 70 9e-11
ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containi... 70 1e-10
>ref|XP_019071772.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Vitis vinifera]
emb|CBI18900.3| unnamed protein product, partial [Vitis vinifera]
Length = 637
Score = 79.3 bits (194), Expect = 8e-14
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +3
Query: 351 IHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
IHARVIKSLNY DGF GDR+ S+Y KLG E +Q+LFDEM NKDLVS N L+SG
Sbjct: 84 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSG 137
>emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 78.2 bits (191), Expect = 2e-13
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +3
Query: 351 IHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
IHARVIKSLNY DGF GDR+ S+Y KLG E +Q+LFDEM N+DLVS N L+SG
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSG 214
>ref|XP_022867313.1| pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Olea europaea var. sylvestris]
Length = 626
Score = 75.5 bits (184), Expect = 2e-12
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +3
Query: 345 ETIHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
+T HAR+ KSLNY+DGF GDR+ S+YTKLG E + LFDEM KDLVS N LISG
Sbjct: 71 KTFHARIFKSLNYEDGFIGDRLVSVYTKLGFFEYAWNLFDEMPKKDLVSWNSLISG 126
>gb|PON93983.1| DYW domain containing protein [Trema orientalis]
Length = 640
Score = 75.1 bits (183), Expect = 2e-12
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = +3
Query: 351 IHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
IHA VIKS+NY DGF GD++ S Y KLG +S+Q+LFDEM NKDLVS N LISG
Sbjct: 85 IHAHVIKSVNYSDGFIGDQLVSCYAKLGCAKSAQQLFDEMPNKDLVSWNNLISG 138
>gb|PON60614.1| DYW domain containing protein [Parasponia andersonii]
Length = 640
Score = 75.1 bits (183), Expect = 2e-12
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = +3
Query: 351 IHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
IHA VIKS+NY DGF GD++ S Y KLG +S+Q+LFDEM NKDLVS N LISG
Sbjct: 85 IHAHVIKSVNYSDGFIGDQLVSCYAKLGCAKSAQQLFDEMPNKDLVSWNNLISG 138
>ref|XP_022144168.1| pentatricopeptide repeat-containing protein At5g40410,
mitochondrial isoform X2 [Momordica charantia]
Length = 629
Score = 74.3 bits (181), Expect = 4e-12
Identities = 38/60 (63%), Positives = 45/60 (75%)
Frame = +3
Query: 348 TIHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISGGFWGK 527
TIHARVIKS Y+DGF GD++A+ Y LG E +QKLFD+M +KDLVS N LISG GK
Sbjct: 77 TIHARVIKSFLYRDGFIGDQLAACYNNLGCAEDAQKLFDDMPDKDLVSWNSLISGFSRGK 136
>ref|XP_022144167.1| pentatricopeptide repeat-containing protein At5g40410,
mitochondrial isoform X1 [Momordica charantia]
Length = 635
Score = 74.3 bits (181), Expect = 4e-12
Identities = 38/60 (63%), Positives = 45/60 (75%)
Frame = +3
Query: 348 TIHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISGGFWGK 527
TIHARVIKS Y+DGF GD++A+ Y LG E +QKLFD+M +KDLVS N LISG GK
Sbjct: 77 TIHARVIKSFLYRDGFIGDQLAACYNNLGCAEDAQKLFDDMPDKDLVSWNSLISGFSRGK 136
>ref|XP_020965338.1| pentatricopeptide repeat-containing protein At5g40410,
mitochondrial isoform X2 [Arachis ipaensis]
Length = 599
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/54 (62%), Positives = 42/54 (77%)
Frame = +3
Query: 351 IHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
IHARVIKSLN++DGF GD++ S Y +GL ++KLFDEM NKD VS N L+SG
Sbjct: 46 IHARVIKSLNFRDGFIGDQLVSSYLNMGLIHDAEKLFDEMANKDFVSWNSLVSG 99
>dbj|GAV56689.1| PPR domain-containing protein/PPR_2 domain-containing
protein/DYW_deaminase domain-containing protein
[Cephalotus follicularis]
Length = 618
Score = 73.2 bits (178), Expect = 1e-11
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = +3
Query: 351 IHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
IHARVIKSLNY GF GD++ S Y K+G E + KLFDEM NKDLVS N LISG
Sbjct: 65 IHARVIKSLNYNQGFIGDQLVSAYLKMGNYEETHKLFDEMPNKDLVSWNSLISG 118
>ref|XP_016170528.1| pentatricopeptide repeat-containing protein At5g40410,
mitochondrial isoform X1 [Arachis ipaensis]
ref|XP_016170529.1| pentatricopeptide repeat-containing protein At5g40410,
mitochondrial isoform X1 [Arachis ipaensis]
ref|XP_016170531.1| pentatricopeptide repeat-containing protein At5g40410,
mitochondrial isoform X1 [Arachis ipaensis]
Length = 631
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/54 (62%), Positives = 42/54 (77%)
Frame = +3
Query: 351 IHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
IHARVIKSLN++DGF GD++ S Y +GL ++KLFDEM NKD VS N L+SG
Sbjct: 78 IHARVIKSLNFRDGFIGDQLVSSYLNMGLIHDAEKLFDEMANKDFVSWNSLVSG 131
>ref|XP_008237749.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Prunus mume]
Length = 644
Score = 72.4 bits (176), Expect = 2e-11
Identities = 46/121 (38%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +3
Query: 156 FFGFRYFVHFEKFSSLTSQNLWI**FYQEHFAVPSFLIF--HPHTDLKAQXXXXXXXXXX 329
FF F + ++F L +Q F+ + S + F HP+ D+
Sbjct: 28 FFYFHQIQNPQRFCKLFTQKR----FHNALLSPQSSVQFPSHPNPDILLSYLISDVGSCS 83
Query: 330 XXXXRETIHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLIS 509
IH+ VIKS NY DGF GD++ S YT+LG + ++ LFDEM NKDLVS N LIS
Sbjct: 84 SISYCRAIHSCVIKSFNYTDGFIGDQLVSCYTRLGRADDARNLFDEMPNKDLVSWNSLIS 143
Query: 510 G 512
G
Sbjct: 144 G 144
>ref|XP_021284757.1| pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Herrania umbratica]
Length = 626
Score = 71.6 bits (174), Expect = 4e-11
Identities = 35/56 (62%), Positives = 42/56 (75%)
Frame = +3
Query: 345 ETIHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
+ HARVIKS+NY+ GF GD++ S Y +LG E +Q LFDEM NKDLVS N LISG
Sbjct: 71 QAFHARVIKSVNYRHGFVGDQLVSNYARLGYPEYAQNLFDEMPNKDLVSWNSLISG 126
>ref|XP_008445305.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g40410, mitochondrial-like [Cucumis melo]
Length = 629
Score = 71.6 bits (174), Expect = 4e-11
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +3
Query: 351 IHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
IHARV KSL Y+DGF GD++ + Y KLG E +QKLFD+M +KDLVS N LISG
Sbjct: 80 IHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDAQKLFDDMPHKDLVSWNSLISG 133
>ref|XP_015936776.1| pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Arachis duranensis]
ref|XP_020985214.1| pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Arachis duranensis]
ref|XP_020985215.1| pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Arachis duranensis]
Length = 631
Score = 71.2 bits (173), Expect = 5e-11
Identities = 33/54 (61%), Positives = 42/54 (77%)
Frame = +3
Query: 351 IHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
IHARVIKSL+++DGF GD++ S Y +GL ++KLFDEM NKD VS N L+SG
Sbjct: 78 IHARVIKSLDFRDGFIGDQLVSSYLNMGLIHDAEKLFDEMANKDFVSWNSLVSG 131
>ref|XP_022752063.1| pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Durio zibethinus]
Length = 626
Score = 70.9 bits (172), Expect = 7e-11
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +3
Query: 345 ETIHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
+ HARVIKS+NY+ GF GD++ + Y KLG + +Q LFDEM NKDLVS N LISG
Sbjct: 71 QAFHARVIKSVNYRHGFVGDQLVTNYAKLGYPDDAQTLFDEMPNKDLVSWNSLISG 126
>ref|XP_007017936.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Theobroma cacao]
ref|XP_017981329.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Theobroma cacao]
Length = 626
Score = 70.9 bits (172), Expect = 7e-11
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +3
Query: 345 ETIHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
+ HARVIK++NY+ GF GD++ S Y +LG E +Q LFDEM NKDLVS N LISG
Sbjct: 71 QAFHARVIKAVNYRHGFVGDQLVSSYARLGYPEYAQNLFDEMPNKDLVSWNSLISG 126
>gb|EOY15161.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 626
Score = 70.9 bits (172), Expect = 7e-11
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +3
Query: 345 ETIHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
+ HARVIK++NY+ GF GD++ S Y +LG E +Q LFDEM NKDLVS N LISG
Sbjct: 71 QAFHARVIKAVNYRHGFVGDQLVSSYARLGYPEYAQNLFDEMPNKDLVSWNSLISG 126
>ref|XP_004514844.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Cicer arietinum]
ref|XP_004514846.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Cicer arietinum]
ref|XP_012575544.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Cicer arietinum]
ref|XP_012575545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Cicer arietinum]
ref|XP_012575546.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Cicer arietinum]
ref|XP_012575547.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Cicer arietinum]
ref|XP_012575548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Cicer arietinum]
ref|XP_012575549.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Cicer arietinum]
Length = 628
Score = 70.9 bits (172), Expect = 7e-11
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +3
Query: 351 IHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
IHA VIKSL+Y+DGF GD++ S Y KLG T+ + LFDEM NKD VS N L+SG
Sbjct: 72 IHAHVIKSLDYRDGFIGDQLVSCYLKLGATQDAHLLFDEMPNKDFVSWNSLVSG 125
>ref|XP_007200084.2| pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Prunus persica]
gb|ONH89643.1| hypothetical protein PRUPE_8G006400 [Prunus persica]
Length = 644
Score = 70.5 bits (171), Expect = 9e-11
Identities = 46/127 (36%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Frame = +3
Query: 138 LVQDWIFFGFRYFVHFEKFSSLTSQNLWI**FYQEHFAVPSFLIF--HPHTDLKAQXXXX 311
L + IFF F + ++F +Q F+ + S + F HP+ D
Sbjct: 22 LFKSRIFFYFHQIQNPQRFCKPFTQKR----FHNALLSPQSSVQFPSHPNPDSLLSYLIS 77
Query: 312 XXXXXXXXXXRETIHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS 491
IH+ VIKS NY DGF GD++ S YT+LG + ++ LFDEM NKDL+S
Sbjct: 78 AVSSCSSISYSRAIHSCVIKSFNYTDGFIGDQLVSCYTRLGRADDARNLFDEMPNKDLIS 137
Query: 492 *NFLISG 512
N LISG
Sbjct: 138 WNSLISG 144
>ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial [Glycine max]
gb|KRH13912.1| hypothetical protein GLYMA_15G272100 [Glycine max]
Length = 626
Score = 70.1 bits (170), Expect = 1e-10
Identities = 33/54 (61%), Positives = 42/54 (77%)
Frame = +3
Query: 351 IHARVIKSLNYKDGFTGDRVASLYTKLGLTESSQKLFDEMLNKDLVS*NFLISG 512
IHARVIKSL+Y+DGF GD++ S Y +G T +QKLFDEM +KD +S N L+SG
Sbjct: 73 IHARVIKSLDYRDGFIGDQLVSCYLNMGSTPDAQKLFDEMPHKDSISWNSLVSG 126