BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00033829
         (607 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD59438.1| Rps16 protein, partial (plastid) [Clivia gardenii]     55   1e-06
ref|YP_009175987.1| ribosomal protein S16 (chloroplast) [Ficus r...    55   3e-06

>emb|CAD59438.1| Rps16 protein, partial (plastid) [Clivia gardenii]
          Length = 74

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = +1

Query: 157 IVHDGARVERINSFLGGKDLGLMPINQLEQLRKYIFHI 270
           IVHDGAR + I+SF+GGK+LGL+ IN+L+QL KYI +I
Sbjct: 25  IVHDGARTKSIDSFIGGKNLGLVTINKLDQLCKYILNI 62


>ref|YP_009175987.1| ribosomal protein S16 (chloroplast) [Ficus racemosa]
 ref|YP_009390539.1| ribosomal protein S16 (chloroplast) [Ficus carica]
 gb|ALI30688.1| ribosomal protein S16 (chloroplast) [Ficus racemosa]
 gb|ARV87002.1| ribosomal protein S16 (chloroplast) [Ficus carica]
          Length = 117

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 26/38 (68%), Positives = 31/38 (81%)
 Frame = +1

Query: 157 IVHDGARVERINSFLGGKDLGLMPINQLEQLRKYIFHI 270
           I+HDGAR ERI+SF GGK+LGL+ IN+L QL K IF I
Sbjct: 4   IIHDGARAERIDSFFGGKNLGLVSINKLRQLCKSIFDI 41