BLASTX nr result

ID: Rehmannia30_contig00033472 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00033472
         (428 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU22962.1| hypothetical protein MIMGU_mgv1a022714mg, partial...    96   8e-23
ref|XP_012854886.1| PREDICTED: sister chromatid cohesion protein...    99   3e-21
gb|PIN16167.1| Sister chromatid cohesion complex Cohesin, subuni...    98   7e-21
ref|XP_020554556.1| sister chromatid cohesion protein PDS5 homol...    89   9e-18
ref|XP_022856625.1| uncharacterized protein LOC111377727 [Olea e...    74   1e-13

>gb|EYU22962.1| hypothetical protein MIMGU_mgv1a022714mg, partial [Erythranthe
           guttata]
          Length = 116

 Score = 95.9 bits (237), Expect = 8e-23
 Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 15/114 (13%)
 Frame = +3

Query: 12  DTVNKCDSSCAGPSKLSRDGDQVKYFTSK-------------DMDDLQARYCNHSGETSA 152
           DTVN+  ++C  PSK SR GDQV + T +             D+DDLQA+ C++ G +SA
Sbjct: 1   DTVNESGTNCTEPSKSSRAGDQVIHETEEVDILSLDSEMCETDLDDLQAQRCDYGGGSSA 60

Query: 153 NDQANILDANGYDSKQENLLKERDNCIRKV-SQPVKRVKRRED-AIGTSTSEVI 308
           ND+  +LDA G+DS QENL ++R+  +RK  SQ VKR KR ED AIG+ TSEVI
Sbjct: 61  NDEDKLLDAQGFDSIQENLPRKRNKSVRKASSQAVKRSKRCEDAAIGSLTSEVI 114


>ref|XP_012854886.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog A
            [Erythranthe guttata]
          Length = 1353

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 59/117 (50%), Positives = 77/117 (65%), Gaps = 15/117 (12%)
 Frame = +3

Query: 3    RGEDTVNKCDSSCAGPSKLSRDGDQVKYFTSK-------------DMDDLQARYCNHSGE 143
            R EDTVN+  ++C  PSK SR GDQV + T +             D+DDLQA+ C++ G 
Sbjct: 1235 REEDTVNESGTNCTEPSKSSRAGDQVIHETEEVDILSLDSEMCETDLDDLQAQRCDYGGG 1294

Query: 144  TSANDQANILDANGYDSKQENLLKERDNCIRKV-SQPVKRVKRRED-AIGTSTSEVI 308
            +SAND+  +LDA G+DS QENL ++R+  +RK  SQ VKR KR ED AIG+ TSEVI
Sbjct: 1295 SSANDEDKLLDAQGFDSIQENLPRKRNKSVRKASSQAVKRSKRCEDAAIGSLTSEVI 1351


>gb|PIN16167.1| Sister chromatid cohesion complex Cohesin, subunit PDS5 [Handroanthus
            impetiginosus]
          Length = 1398

 Score = 97.8 bits (242), Expect = 7e-21
 Identities = 63/119 (52%), Positives = 70/119 (58%), Gaps = 18/119 (15%)
 Frame = +3

Query: 3    RGEDTVNKCDSSCAGPSKLSRDGDQVKYFTSK--------DMDDLQARY----------C 128
            RGEDTV KCDS C  PSKLS  GDQV  FTSK        D+  L +             
Sbjct: 1264 RGEDTVTKCDSICNEPSKLSGAGDQVNCFTSKITYETGEVDILSLDSEKWEIIPNKEFGS 1323

Query: 129  NHSGETSANDQANILDANGYDSKQENLLKERDNCIRKVSQPVKRVKRREDAIGTSTSEV 305
            + SG+ SAN QA I D +G DS QENL K RD C RK S+ VKR K  +DAIGTSTSEV
Sbjct: 1324 DDSGDFSANGQAKI-DTSGCDSNQENLPKNRDICSRKASKAVKRTKMCDDAIGTSTSEV 1381


>ref|XP_020554556.1| sister chromatid cohesion protein PDS5 homolog A [Sesamum indicum]
          Length = 1387

 Score = 89.0 bits (219), Expect = 9e-18
 Identities = 53/103 (51%), Positives = 62/103 (60%), Gaps = 20/103 (19%)
 Frame = +3

Query: 60   SRDGDQVKYFTSK--------------------DMDDLQARYCNHSGETSANDQANILDA 179
            SR GDQ+ Y TSK                    D+DDLQ +YC+ S ++SANDQ   +DA
Sbjct: 1267 SRVGDQMSYSTSKVTYETGEVNTLSMDSEKWETDLDDLQVQYCSQSHDSSANDQTKAVDA 1326

Query: 180  NGYDSKQENLLKERDNCIRKVSQPVKRVKRREDAIGTSTSEVI 308
            + YDSKQENL K  D   RKVSQ VKR KR +DA G STSEVI
Sbjct: 1327 HRYDSKQENLPKNGDIRGRKVSQAVKRTKRCKDASGKSTSEVI 1369


>ref|XP_022856625.1| uncharacterized protein LOC111377727 [Olea europaea var.
           sylvestris]
          Length = 159

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 41/102 (40%), Positives = 61/102 (59%)
 Frame = +3

Query: 3   RGEDTVNKCDSSCAGPSKLSRDGDQVKYFTSKDMDDLQARYCNHSGETSANDQANILDAN 182
           R ++T+  C  + A  S  SR    +++ +SKD+ DLQ+R+C+H  ++S + Q  I    
Sbjct: 45  REKETITGCSIASANTSTFSRAAYHIEHCSSKDLVDLQSRHCDHGDDSSLSGQREIDKIL 104

Query: 183 GYDSKQENLLKERDNCIRKVSQPVKRVKRREDAIGTSTSEVI 308
           G D++ +NL K RD CI+KV   VK  K R+  I TS SEVI
Sbjct: 105 GSDTEPDNLSK-RDFCIKKVPLAVKMKKGRKSVIDTSASEVI 145


Top