BLASTX nr result

ID: Rehmannia30_contig00033059 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00033059
         (416 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN19979.1| hypothetical protein CDL12_07304 [Handroanthus im...    60   5e-08

>gb|PIN19979.1| hypothetical protein CDL12_07304 [Handroanthus impetiginosus]
          Length = 251

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 37/83 (44%), Positives = 44/83 (53%)
 Frame = -1

Query: 251 DHHHQESPINIRDVHPLTPPTNGHRXXXXXXXXXXXXXXXXXXXSREFNALVLAGSVIRP 72
           D     SP+ +RD+H LTPP +GHR                   SREFNALVLAGS +R 
Sbjct: 13  DRDESPSPMMMRDIHALTPPISGHRSSSPSMTSSSNSTENFTTISREFNALVLAGSRMRT 72

Query: 71  ETQSDRPNYNLGRIGEEHNNLHE 3
           + Q    N NL RI  EH NL+E
Sbjct: 73  QNQESGSN-NLTRI-REHENLNE 93


Top