BLASTX nr result

ID: Rehmannia30_contig00032916 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00032916
         (418 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP13709.1| unnamed protein product [Coffea canephora]             47   5e-07

>emb|CDP13709.1| unnamed protein product [Coffea canephora]
          Length = 3645

 Score = 47.4 bits (111), Expect(2) = 5e-07
 Identities = 21/32 (65%), Positives = 26/32 (81%)
 Frame = +3

Query: 303  SVDDIFVVSMKLFHNSDAIAFQLRDLLTILCS 398
            SVDDI   +MKLFH+SD++AFQL DLL  LC+
Sbjct: 1390 SVDDILAATMKLFHSSDSMAFQLTDLLVTLCN 1421



 Score = 33.9 bits (76), Expect(2) = 5e-07
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = +1

Query: 196  SRLLLFHCSSS*ELSKVDSVNKSVGILIEDEQIET 300
            +R L     +S E SKVD+  KSV +L E+EQI+T
Sbjct: 1354 ARALALSLGNSSEASKVDNTEKSVDVLAEEEQIKT 1388


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