BLASTX nr result

ID: Rehmannia30_contig00032884 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00032884
         (505 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN07497.1| hypothetical protein CDL12_19934 [Handroanthus im...   140   1e-35
ref|XP_011094260.1| serine/arginine-rich splicing factor 4 [Sesa...   100   3e-21
ref|XP_022851313.1| uncharacterized protein LOC111373075 [Olea e...    78   1e-13
ref|XP_022899073.1| serine/arginine-rich splicing factor 6-like ...    69   1e-10
ref|XP_022899049.1| serine/arginine-rich splicing factor 4-like ...    69   1e-10

>gb|PIN07497.1| hypothetical protein CDL12_19934 [Handroanthus impetiginosus]
          Length = 643

 Score =  140 bits (353), Expect = 1e-35
 Identities = 83/169 (49%), Positives = 104/169 (61%), Gaps = 23/169 (13%)
 Frame = +3

Query: 66  LPVKLNRRVSPPPDERQENSKSSVANAVSLAHSTDLFGKETLIRSSTGTSKSENITSAVE 245
           LP +++ + SP PDERQ N K S+ N   LAH  DL   +T++RSS G S SENIT A+E
Sbjct: 413 LPAEVDWQYSPSPDERQPNFKDSMVNVGGLAHCEDLSEGKTMVRSSEGASMSENITDAME 472

Query: 246 NEFETKPAKLEQEYMEKDLS-------------------EXXXXXXXXXXFEMSDSQNED 368
           NEFE    KLE+E MEKDLS                   +           E+ DS+N+D
Sbjct: 473 NEFEVL-TKLEEEEMEKDLSGKDDEHCHYSHAPLSDDGDQTADNLFLHSEREIRDSRNKD 531

Query: 369 LVG----APESNMSIRSNASNSARMSPEEIYMVLKHYGLQYPEEREKDL 503
           LVG    AP+S++++RSNASNS R+S EE+ M LKHYGLQYPEE EKDL
Sbjct: 532 LVGEHMLAPQSDIALRSNASNSTRISSEELRMALKHYGLQYPEETEKDL 580


>ref|XP_011094260.1| serine/arginine-rich splicing factor 4 [Sesamum indicum]
 ref|XP_011094261.1| serine/arginine-rich splicing factor 4 [Sesamum indicum]
          Length = 658

 Score =  100 bits (248), Expect = 3e-21
 Identities = 65/178 (36%), Positives = 87/178 (48%), Gaps = 32/178 (17%)
 Frame = +3

Query: 66  LPVKLNRRVSPPPDERQENSKSSVANAVSLAHSTDLFGKETLIRSSTGTSKSENITSAVE 245
           LP++  R   P P +RQ +SK  + NAV LA+  DLF   T      G S +E++T   E
Sbjct: 418 LPIESRRHSPPSPHQRQTDSKDPMVNAVGLANRQDLFEGITTGGDGAGVSTTEHVTVPTE 477

Query: 246 NEFETKPAKLEQEYMEKDL----------------------------SEXXXXXXXXXXF 341
           N  ET+P KLE+E M++DL                            ++           
Sbjct: 478 NACETRPGKLEKEEMKEDLLAKDDEHGNSVSRGSCQVLAHLLHSDDGAQTADYMSQHSLK 537

Query: 342 EMSDSQNEDLVG----APESNMSIRSNASNSARMSPEEIYMVLKHYGLQYPEEREKDL 503
            M DS+  D+ G    AP S+  +RS A+N   MS +EI MVLKHYGLQYP E EK+L
Sbjct: 538 GMRDSEKNDVAGEDMLAPRSDGCLRSKATNPLSMSLDEICMVLKHYGLQYPTETEKNL 595


>ref|XP_022851313.1| uncharacterized protein LOC111373075 [Olea europaea var.
           sylvestris]
          Length = 534

 Score = 78.2 bits (191), Expect = 1e-13
 Identities = 59/151 (39%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
 Frame = +3

Query: 66  LPVKLNRRVSPPPDERQENSKSSVANAVSLAHSTDLFGKETLIRSSTGTSKSENITSAVE 245
           LPV L+R  S  P++ Q                TD  G E L++  +GT KSENIT    
Sbjct: 341 LPVALDRCFSSSPNKMQ----------------TDYRGDEKLVKGVSGT-KSENITVT-- 381

Query: 246 NEFETKPAKLEQEYMEKDLSEXXXXXXXXXXF-EMSDSQNEDLV----GAPESNMSIRSN 410
            E E+  A L +E M+KDL+             EM ++ NE  V     A E  +S+RSN
Sbjct: 382 -ENESAAAALREEGMKKDLAIREDAHNIAFTMREMRETPNEYCVVEHTSAKEPEISVRSN 440

Query: 411 ASNSARMSPEEIYMVLKHYGLQYPEEREKDL 503
           A+ S R+S EE+Y  LKHY L++PEE +KDL
Sbjct: 441 AAQSTRLSSEEMYTFLKHYRLEHPEEDKKDL 471


>ref|XP_022899073.1| serine/arginine-rich splicing factor 6-like isoform X2 [Olea
           europaea var. sylvestris]
 ref|XP_022899081.1| serine/arginine-rich splicing factor 6-like isoform X2 [Olea
           europaea var. sylvestris]
          Length = 639

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 60/179 (33%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
 Frame = +3

Query: 66  LPVKLNRRVSPPPDERQENSKSSVANAVSLAHSTDLFGKETLIRSSTGTSKSENITSAVE 245
           LPV L+R  S  P++ Q                TD  G E L++  +GT KSENIT    
Sbjct: 418 LPVALDRCFSSSPNKMQ----------------TDYRGDEKLVKGVSGT-KSENITVT-- 458

Query: 246 NEFETKPAKLEQEYMEKDLS-----------------------------EXXXXXXXXXX 338
            E E+  A L +E M+KDL+                                        
Sbjct: 459 -ENESAAAALREEGMKKDLAIREDAHNIAFTSDSCQLLESYNTQSDNSNHNWDNLMLQSE 517

Query: 339 FEMSDSQNEDLV----GAPESNMSIRSNASNSARMSPEEIYMVLKHYGLQYPEEREKDL 503
            EM ++ NE  V     A E  +S+RSNA+ S R+S EE+Y VLKHY L++PEE +KDL
Sbjct: 518 KEMRETPNEYCVVEHTSAKEPEISVRSNAAQSTRLSSEEMYTVLKHYRLEHPEEDKKDL 576


>ref|XP_022899049.1| serine/arginine-rich splicing factor 4-like isoform X1 [Olea
           europaea var. sylvestris]
 ref|XP_022899056.1| serine/arginine-rich splicing factor 4-like isoform X1 [Olea
           europaea var. sylvestris]
 ref|XP_022899065.1| serine/arginine-rich splicing factor 4-like isoform X1 [Olea
           europaea var. sylvestris]
          Length = 672

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 60/179 (33%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
 Frame = +3

Query: 66  LPVKLNRRVSPPPDERQENSKSSVANAVSLAHSTDLFGKETLIRSSTGTSKSENITSAVE 245
           LPV L+R  S  P++ Q                TD  G E L++  +GT KSENIT    
Sbjct: 451 LPVALDRCFSSSPNKMQ----------------TDYRGDEKLVKGVSGT-KSENITVT-- 491

Query: 246 NEFETKPAKLEQEYMEKDLS-----------------------------EXXXXXXXXXX 338
            E E+  A L +E M+KDL+                                        
Sbjct: 492 -ENESAAAALREEGMKKDLAIREDAHNIAFTSDSCQLLESYNTQSDNSNHNWDNLMLQSE 550

Query: 339 FEMSDSQNEDLV----GAPESNMSIRSNASNSARMSPEEIYMVLKHYGLQYPEEREKDL 503
            EM ++ NE  V     A E  +S+RSNA+ S R+S EE+Y VLKHY L++PEE +KDL
Sbjct: 551 KEMRETPNEYCVVEHTSAKEPEISVRSNAAQSTRLSSEEMYTVLKHYRLEHPEEDKKDL 609


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