BLASTX nr result
ID: Rehmannia30_contig00032739
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00032739
(430 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit ... 57 4e-09
ref|XP_019171018.1| PREDICTED: uncharacterized protein LOC109166... 49 4e-08
gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygro... 60 8e-08
ref|XP_019158564.1| PREDICTED: uncharacterized protein LOC109155... 47 8e-08
ref|XP_019153897.1| PREDICTED: uncharacterized protein LOC109150... 47 2e-07
ref|XP_019163481.1| PREDICTED: uncharacterized protein LOC109159... 45 2e-07
gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit ... 58 4e-07
ref|XP_019193117.1| PREDICTED: uncharacterized protein LOC109187... 47 5e-07
ref|XP_019193031.1| PREDICTED: uncharacterized protein LOC109187... 47 5e-07
dbj|BAF64710.1| putative transposase [Ipomoea tricolor] 47 6e-07
ref|XP_019167569.1| PREDICTED: replication factor A protein 1-li... 43 1e-06
gb|PNX61894.1| replication factor-A carboxy-terminal domain prot... 53 3e-06
gb|PNX95696.1| replication factor-A carboxy-terminal domain prot... 45 4e-06
>gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit B-like [Dorcoceras
hygrometricum]
Length = 161
Score = 57.4 bits (137), Expect(2) = 4e-09
Identities = 23/57 (40%), Positives = 40/57 (70%)
Frame = +2
Query: 260 QGDRIHCTIRKMHMEQYKKMLNEGHIYALRDFLVTNQMDKYKTYVNKYKIIFHGKTH 430
+GDRIH +++K +++ + +L +GH++A+++ +V KYKT +KYKI F KTH
Sbjct: 34 EGDRIHASVKKPVLDKVRHILKDGHLFAIKNIIVAENRMKYKTTTSKYKINFITKTH 90
Score = 31.2 bits (69), Expect(2) = 4e-09
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 66 WEVNLRLVCRVYQKPAFNDNRQIQSIECVFHDSK 167
W + LRLV R Y+ PA+ + ++ECVFHD +
Sbjct: 3 WALKLRLV-RCYELPAYEKSGDF-TLECVFHDKE 34
>ref|XP_019171018.1| PREDICTED: uncharacterized protein LOC109166548 [Ipomoea nil]
Length = 335
Score = 48.9 bits (115), Expect(2) = 4e-08
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +2
Query: 260 QGDRIHCTIRKMHMEQYKKMLNEGHIYALRDFLVTNQMDKYKTYVNKYKIIFHGKTH 430
+G +H I K +EQ+ K+L EG +YA++DF V + +YKT + Y I F +TH
Sbjct: 50 EGTYVHGNISKDCVEQFSKLLKEGKVYAIKDFAVISHYYQYKTTDHTYMIRFTHETH 106
Score = 36.2 bits (82), Expect(2) = 4e-08
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 15 MAPMFSLNKAFNKSKTSWEVNLRLVCRVYQKPAFNDNRQIQSIECVFHDSK 167
MAP++ K S + LRLV R Y P ++ I+S EC+FHDS+
Sbjct: 1 MAPLYIQGKDLGISTYKKAIRLRLV-RTYNVPEGRNSEAIKSQECLFHDSE 50
>gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygrometricum]
Length = 250
Score = 59.7 bits (143), Expect = 8e-08
Identities = 25/57 (43%), Positives = 40/57 (70%)
Frame = +2
Query: 260 QGDRIHCTIRKMHMEQYKKMLNEGHIYALRDFLVTNQMDKYKTYVNKYKIIFHGKTH 430
+GDRIH +++K +++ K +L EGH++A+++ +V KYKT +KYKI F KTH
Sbjct: 34 EGDRIHASVKKPVLDRVKPILKEGHLFAIKNIIVAENRMKYKTTASKYKINFITKTH 90
>ref|XP_019158564.1| PREDICTED: uncharacterized protein LOC109155334 [Ipomoea nil]
Length = 532
Score = 47.0 bits (110), Expect(2) = 8e-08
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 260 QGDRIHCTIRKMHMEQYKKMLNEGHIYALRDFLVTNQMDKYKTYVNKYKIIFHGKT 427
+G IH I K +E+Y K+L EG +YA++DF V + +YKT + Y I F +T
Sbjct: 51 EGTYIHGNIPKECVEKYSKLLKEGKVYAIKDFAVISHYYQYKTTDHSYMIRFSHET 106
Score = 37.0 bits (84), Expect(2) = 8e-08
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 15 MAPMFSLNKAFNKSKTSWEVNLRLVCRVYQKP-AFNDNRQIQSIECVFHDSK 167
MAP+F L K S + LRL+ R Y P N + I+S ECVFHDS+
Sbjct: 1 MAPVFILGKDIKFSTYKKAIRLRLI-RTYTVPEGRNSSDSIKSQECVFHDSE 51
>ref|XP_019153897.1| PREDICTED: uncharacterized protein LOC109150424 [Ipomoea nil]
Length = 512
Score = 47.0 bits (110), Expect(2) = 2e-07
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 260 QGDRIHCTIRKMHMEQYKKMLNEGHIYALRDFLVTNQMDKYKTYVNKYKIIFHGKT 427
+G IH I K +E+Y K+L EG +YA++DF V + +YKT + Y I F +T
Sbjct: 51 EGTYIHGNIPKECVEKYSKLLKEGKVYAIKDFAVISHYYQYKTTDHSYMIRFSHET 106
Score = 35.4 bits (80), Expect(2) = 2e-07
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 15 MAPMFSLNKAFNKSKTSWEVNLRLVCRVYQKP-AFNDNRQIQSIECVFHD 161
MAP+F L K S + LRL+ R Y P N + I+S ECVFHD
Sbjct: 1 MAPVFILGKDIKLSTYKKAIRLRLI-RTYTVPEGRNSSDSIKSQECVFHD 49
>ref|XP_019163481.1| PREDICTED: uncharacterized protein LOC109159825 [Ipomoea nil]
Length = 173
Score = 45.4 bits (106), Expect(2) = 2e-07
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +2
Query: 260 QGDRIHCTIRKMHMEQYKKMLNEGHIYALRDFLVTNQMDKYKTYVNKYKIIFHGKT 427
+G IH I K +++Y K+L EG +YA++DF V + +YKT + Y I F +T
Sbjct: 51 EGTYIHGNIPKECVKKYSKLLKEGKVYAIKDFAVISHYYQYKTTDHSYMIRFSHET 106
Score = 37.0 bits (84), Expect(2) = 2e-07
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 15 MAPMFSLNKAFNKSKTSWEVNLRLVCRVYQKP-AFNDNRQIQSIECVFHDSK 167
MAP+F L K S + LRL+ R Y P N + I+S ECVFHDS+
Sbjct: 1 MAPVFILGKDIKLSTYRKAIRLRLI-RTYTVPEGRNSSDSIKSQECVFHDSE 51
>gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit [Dorcoceras
hygrometricum]
Length = 388
Score = 58.2 bits (139), Expect = 4e-07
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +2
Query: 194 ISCKLNTK*IDYLLIIINMNILQ-GDRIHCTIRKMHMEQYKKMLNEGHIYALRDFLVTNQ 370
+ C L+ K D + I +L GD IH +I+K ++ + +L EGH++A+++ +V
Sbjct: 91 LECVLHDKEGDRIHASIKKPVLDSGDHIHASIKKPVLDSVRPILKEGHLFAIKNIIVAEN 150
Query: 371 MDKYKTYVNKYKIIFHGKTH 430
KYKT +KYKI F KTH
Sbjct: 151 RMKYKTTASKYKINFITKTH 170
>ref|XP_019193117.1| PREDICTED: uncharacterized protein LOC109187388 [Ipomoea nil]
Length = 516
Score = 46.6 bits (109), Expect(2) = 5e-07
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 260 QGDRIHCTIRKMHMEQYKKMLNEGHIYALRDFLVTNQMDKYKTYVNKYKIIFHGKT 427
+G IH I K +E+Y K+L EG +YA++DF V + +YKT + Y I F +T
Sbjct: 51 EGTYIHGNIPKECVEKYSKLLTEGKVYAIKDFAVISHYYQYKTTDHNYMIRFTHET 106
Score = 34.7 bits (78), Expect(2) = 5e-07
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 15 MAPMFSLNKAFNKSKTSWEVNLRLVCRVYQKP-AFNDNRQIQSIECVFHDSK 167
MAP++ L K S + LRL+ R Y P N I+S ECVFHDS+
Sbjct: 1 MAPVYVLGKDIKLSTYKKAIRLRLI-RTYTVPEGRNSLDSIKSQECVFHDSE 51
>ref|XP_019193031.1| PREDICTED: uncharacterized protein LOC109187303 [Ipomoea nil]
Length = 509
Score = 46.6 bits (109), Expect(2) = 5e-07
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 260 QGDRIHCTIRKMHMEQYKKMLNEGHIYALRDFLVTNQMDKYKTYVNKYKIIFHGKT 427
+G IH I K +E+Y K+L EG +YA++DF V + +YKT + Y I F +T
Sbjct: 51 EGTYIHGNIPKECVEKYSKLLTEGKVYAIKDFAVISHYYQYKTTDHNYMIRFTHET 106
Score = 34.7 bits (78), Expect(2) = 5e-07
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 15 MAPMFSLNKAFNKSKTSWEVNLRLVCRVYQKP-AFNDNRQIQSIECVFHDSK 167
MAP++ L K S + LRL+ R Y P N I+S ECVFHDS+
Sbjct: 1 MAPVYVLGKDIKLSTYKKAIRLRLI-RTYAVPEGRNSLDSIKSQECVFHDSE 51
>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
Length = 517
Score = 47.0 bits (110), Expect(2) = 6e-07
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +2
Query: 260 QGDRIHCTIRKMHMEQYKKMLNEGHIYALRDFLVTNQMDKYKTYVNKYKIIFHGKT 427
+G +H I K +E+Y ML G +Y++R+FLV + YKT +KY + F+ KT
Sbjct: 50 EGTVLHVNIPKEFVEKYSAMLKIGQVYSIRNFLVISNFYTYKTSPHKYMLKFYYKT 105
Score = 33.9 bits (76), Expect(2) = 6e-07
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 15 MAPMFSLNKAFNKSKTSWEVNLRLVCRVYQKPAFNDNRQIQSIECVFHDSK 167
MAP++ L + + T+ + +RL+ R Y+ P I+ EC+FHD +
Sbjct: 1 MAPLYILGRDISPMNTTSAIKVRLI-RSYEVPERRGAASIKCQECIFHDKE 50
>ref|XP_019167569.1| PREDICTED: replication factor A protein 1-like [Ipomoea nil]
Length = 563
Score = 43.1 bits (100), Expect(2) = 1e-06
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 260 QGDRIHCTIRKMHMEQYKKMLNEGHIYALRDFLVTNQMDKYKTYVNKYKIIFHGKT 427
+G +H + K ++E+Y +EG +YA+++F V YKT KY I F+ +T
Sbjct: 95 EGSFLHAHVPKEYVEKYLSYFSEGSVYAIKNFCVITNFYSYKTSPQKYMIKFNYQT 150
Score = 36.6 bits (83), Expect(2) = 1e-06
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +3
Query: 3 LLHNMAPMFSLNKAFNKSKTSWEVNLRLVCRVYQKPAFNDNRQIQSIECVFHDSK 167
LL MF L + T + LR+V R YQ P ND+ +I+S E VFHD +
Sbjct: 42 LLQTYKKMFILASQISPMNTRQALRLRVV-RAYQIPERNDHTKIRSKEIVFHDEE 95
>gb|PNX61894.1| replication factor-A carboxy-terminal domain protein, partial
[Trifolium pratense]
Length = 118
Score = 53.1 bits (126), Expect = 3e-06
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +2
Query: 260 QGDRIHCTIRKMHMEQYKKMLNEGHIYALRDFLVTNQMDKYKTYVNKYKIIFHGKT 427
+G +IH TIRK + ++ L EGH+Y + F V +Q Y+T ++ YK++FH +T
Sbjct: 33 KGAKIHATIRKQLIHMFESKLEEGHVYEMSIFSVFSQSGNYRTTLHPYKLVFHLRT 88
>gb|PNX95696.1| replication factor-A carboxy-terminal domain protein, partial
[Trifolium pratense]
Length = 481
Score = 44.7 bits (104), Expect(2) = 4e-06
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = +2
Query: 260 QGDRIHCTIRKMHMEQYKKMLNEGHIYALRDFLVTNQMDKYKTYVNKYKIIFHGKT 427
+G +IH T+RK + +++ L+EG +Y + F V Y+T ++ YK++F KT
Sbjct: 50 KGTKIHATVRKQLLYLFQRKLDEGLVYIMSFFTVACSAGAYRTTLHPYKLVFQMKT 105
Score = 33.5 bits (75), Expect(2) = 4e-06
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 15 MAPMFSLNKAFNKSKTSWEVNLRLVCRVYQKPAFNDNRQIQSIECVFHDSK 167
MAP F +T+W +R V R+++ + N Q+ S+E V DSK
Sbjct: 1 MAPRFDSLSEVVPGRTAWRFKVR-VARIWEVSTYLKNNQVNSVEMVLVDSK 50