BLASTX nr result
ID: Rehmannia30_contig00032535
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00032535
(578 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAZ20351.1| hypothetical protein OsJ_35959 [Oryza sativa Japo... 87 4e-18
gb|OAO93542.1| RAT5 [Arabidopsis thaliana] 84 6e-18
gb|PNR57798.1| hypothetical protein PHYPA_004792 [Physcomitrella... 83 1e-17
gb|EOA35702.1| hypothetical protein CARUB_v10020931mg [Capsella ... 83 2e-17
gb|ESQ35988.1| hypothetical protein EUTSA_v10008780mg [Eutrema s... 83 2e-17
gb|PKU78136.1| Protein H2A.7 [Dendrobium catenatum] 83 2e-17
ref|XP_024008309.1| probable histone H2AXa [Eutrema salsugineum] 83 2e-17
ref|XP_023643828.1| probable histone H2AXb [Capsella rubella] 83 2e-17
ref|XP_018450265.1| PREDICTED: probable histone H2AXa [Raphanus ... 83 2e-17
ref|NP_175868.1| gamma histone variant H2AX [Arabidopsis thalian... 83 2e-17
ref|XP_016673688.1| PREDICTED: histone H2AX-like [Gossypium hirs... 83 2e-17
ref|XP_010458156.1| PREDICTED: probable histone H2AXa [Camelina ... 83 2e-17
ref|XP_010511579.1| PREDICTED: probable histone H2AXb [Camelina ... 83 2e-17
ref|XP_010489512.1| PREDICTED: probable histone H2AXa [Camelina ... 83 2e-17
ref|XP_009148143.1| PREDICTED: probable histone H2AXa [Brassica ... 83 2e-17
ref|XP_009110869.1| PREDICTED: probable histone H2AXa [Brassica ... 83 2e-17
gb|KFK43194.1| hypothetical protein AALP_AA1G092400 [Arabis alpina] 83 2e-17
ref|XP_002892475.1| probable histone H2AXa [Arabidopsis lyrata s... 83 2e-17
ref|XP_008813772.1| PREDICTED: probable histone H2A.2 isoform X1... 83 2e-17
gb|KVH92171.1| Histone core [Cynara cardunculus var. scolymus] 83 2e-17
>gb|EAZ20351.1| hypothetical protein OsJ_35959 [Oryza sativa Japonica Group]
Length = 158
Score = 86.7 bits (213), Expect = 4e-18
Identities = 50/88 (56%), Positives = 59/88 (67%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEVNLYIQ*MSSIFVSLYCL 476
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYL+AVLEYLAAEV + + F YC
Sbjct: 22 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVAI-VSVFLDPFDMRYCR 80
Query: 477 VDLVLKGFLIS*FRFWSSLGMRRGTAKR 560
+ + WSS G RRG K+
Sbjct: 81 ESVGI--------GCWSSPGTRRGDNKK 100
>gb|OAO93542.1| RAT5 [Arabidopsis thaliana]
Length = 92
Score = 84.3 bits (207), Expect = 6e-18
Identities = 40/46 (86%), Positives = 45/46 (97%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEVNLY 434
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYL+AVLEYLAAEV L+
Sbjct: 22 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVKLH 67
>gb|PNR57798.1| hypothetical protein PHYPA_004792 [Physcomitrella patens]
Length = 68
Score = 82.8 bits (203), Expect = 1e-17
Identities = 39/46 (84%), Positives = 44/46 (95%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEVNLY 434
+AGLQFPVGR++RFLKAGKY+ RVGAGAPVYL+AVLEYLAAEV LY
Sbjct: 18 KAGLQFPVGRISRFLKAGKYATRVGAGAPVYLAAVLEYLAAEVRLY 63
>gb|EOA35702.1| hypothetical protein CARUB_v10020931mg [Capsella rubella]
Length = 218
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEV 425
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYLSAVLEYLAAEV
Sbjct: 104 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 146
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 146 VLELAGNAARDNKKTRIVPR 165
>gb|ESQ35988.1| hypothetical protein EUTSA_v10008780mg [Eutrema salsugineum]
Length = 207
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEV 425
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYLSAVLEYLAAEV
Sbjct: 93 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 135
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 135 VLELAGNAARDNKKTRIVPR 154
>gb|PKU78136.1| Protein H2A.7 [Dendrobium catenatum]
Length = 148
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/46 (86%), Positives = 45/46 (97%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEVNLY 434
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYL+AVLEYLAAEV L+
Sbjct: 22 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVWLF 67
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 78 VLELAGNAARDNKKTRIVPR 97
>ref|XP_024008309.1| probable histone H2AXa [Eutrema salsugineum]
Length = 142
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEV 425
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYLSAVLEYLAAEV
Sbjct: 28 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 70
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 70 VLELAGNAARDNKKTRIVPR 89
>ref|XP_023643828.1| probable histone H2AXb [Capsella rubella]
Length = 142
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEV 425
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYLSAVLEYLAAEV
Sbjct: 28 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 70
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 70 VLELAGNAARDNKKTRIVPR 89
>ref|XP_018450265.1| PREDICTED: probable histone H2AXa [Raphanus sativus]
ref|XP_018450266.1| PREDICTED: probable histone H2AXa [Raphanus sativus]
Length = 143
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEV 425
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYLSAVLEYLAAEV
Sbjct: 29 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 71
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 71 VLELAGNAARDNKKTRIVPR 90
>ref|NP_175868.1| gamma histone variant H2AX [Arabidopsis thaliana]
ref|XP_006392493.1| probable histone H2AXb [Eutrema salsugineum]
ref|XP_010414915.1| PREDICTED: probable histone H2AXb [Camelina sativa]
ref|XP_010470366.1| PREDICTED: probable histone H2AXb [Camelina sativa]
sp|Q9S9K7.1|H2AXB_ARATH RecName: Full=Probable histone H2AXb; AltName: Full=HTA3
gb|AAL06478.1|AF411788_1 At1g54690/T22H22_12 [Arabidopsis thaliana]
gb|AAC64883.1| Strong similarity to histone H2A gb|AJ006768 from Cicer arietinum
[Arabidopsis thaliana]
gb|AAM16179.1| At1g54690/T22H22_12 [Arabidopsis thaliana]
gb|AAM62890.1| histone H2A, putative [Arabidopsis thaliana]
gb|AEE33135.1| gamma histone variant H2AX [Arabidopsis thaliana]
gb|ESQ29779.1| hypothetical protein EUTSA_v10023750mg [Eutrema salsugineum]
gb|OAP16928.1| HTA3 [Arabidopsis thaliana]
Length = 142
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEV 425
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYLSAVLEYLAAEV
Sbjct: 28 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 70
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 70 VLELAGNAARDNKKTRIVPR 89
>ref|XP_016673688.1| PREDICTED: histone H2AX-like [Gossypium hirsutum]
ref|XP_017618295.1| PREDICTED: histone H2AX-like [Gossypium arboreum]
gb|KHG15784.1| hypothetical protein F383_22140 [Gossypium arboreum]
gb|PPR97664.1| hypothetical protein GOBAR_AA23011 [Gossypium barbadense]
Length = 140
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEV 425
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYLSAVLEYLAAEV
Sbjct: 26 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 68
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 68 VLELAGNAARDNKKTRIVPR 87
>ref|XP_010458156.1| PREDICTED: probable histone H2AXa [Camelina sativa]
Length = 143
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEV 425
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYLSAVLEYLAAEV
Sbjct: 29 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 71
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 71 VLELAGNAARDNKKTRIVPR 90
>ref|XP_010511579.1| PREDICTED: probable histone H2AXb [Camelina sativa]
Length = 142
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEV 425
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYLSAVLEYLAAEV
Sbjct: 28 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 70
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 70 VLELAGNAARDNKKTRIVPR 89
>ref|XP_010489512.1| PREDICTED: probable histone H2AXa [Camelina sativa]
Length = 142
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEV 425
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYLSAVLEYLAAEV
Sbjct: 28 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 70
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 70 VLELAGNAARDNKKTRIVPR 89
>ref|XP_009148143.1| PREDICTED: probable histone H2AXa [Brassica rapa]
ref|XP_013586820.1| PREDICTED: probable histone H2AXa [Brassica oleracea var. oleracea]
ref|XP_013641043.1| probable histone H2AXa [Brassica napus]
ref|XP_013707924.1| probable histone H2AXa [Brassica napus]
ref|XP_018435965.1| PREDICTED: probable histone H2AXa [Raphanus sativus]
Length = 142
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEV 425
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYLSAVLEYLAAEV
Sbjct: 28 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 70
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 70 VLELAGNAARDNKKTRIVPR 89
>ref|XP_009110869.1| PREDICTED: probable histone H2AXa [Brassica rapa]
ref|XP_013605063.1| PREDICTED: probable histone H2AXa [Brassica oleracea var. oleracea]
ref|XP_013657665.1| probable histone H2AXa [Brassica napus]
ref|XP_022563795.1| probable histone H2AXa [Brassica napus]
emb|CDY32137.1| BnaCnng06460D [Brassica napus]
emb|CDY31123.1| BnaA08g26730D [Brassica napus]
Length = 142
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEV 425
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYLSAVLEYLAAEV
Sbjct: 28 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 70
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 70 VLELAGNAARDNKKTRIVPR 89
>gb|KFK43194.1| hypothetical protein AALP_AA1G092400 [Arabis alpina]
Length = 142
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEV 425
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYLSAVLEYLAAEV
Sbjct: 28 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 70
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 70 VLELAGNAARDNKKTRIVPR 89
>ref|XP_002892475.1| probable histone H2AXa [Arabidopsis lyrata subsp. lyrata]
ref|XP_010475706.1| PREDICTED: probable histone H2AXa [Camelina sativa]
gb|EFH68734.1| hypothetical protein ARALYDRAFT_888122 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEV 425
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYLSAVLEYLAAEV
Sbjct: 28 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 70
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 70 VLELAGNAARDNKKTRIVPR 89
>ref|XP_008813772.1| PREDICTED: probable histone H2A.2 isoform X1 [Phoenix dactylifera]
Length = 150
Score = 82.8 bits (203), Expect(2) = 2e-17
Identities = 39/45 (86%), Positives = 44/45 (97%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEVNL 431
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYL+AVLEYLAAEV +
Sbjct: 22 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVRI 66
Score = 33.9 bits (76), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 79 VLELAGNAARDNKKTRIVPR 98
>gb|KVH92171.1| Histone core [Cynara cardunculus var. scolymus]
Length = 142
Score = 83.2 bits (204), Expect(2) = 2e-17
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +3
Query: 297 RAGLQFPVGRVARFLKAGKYSERVGAGAPVYLSAVLEYLAAEV 425
+AGLQFPVGR+ARFLKAGKY+ERVGAGAPVYLSAVLEYLAAEV
Sbjct: 28 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEV 70
Score = 33.5 bits (75), Expect(2) = 2e-17
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 518 VLELAGNEARNSKKTRIGPR 577
VLELAGN AR++KKTRI PR
Sbjct: 70 VLELAGNAARDNKKTRIIPR 89