BLASTX nr result
ID: Rehmannia30_contig00031712
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00031712
(775 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ERN02875.1| hypothetical protein AMTR_s00334p00015220 [Ambore... 135 2e-37
gb|OIW17041.1| hypothetical protein TanjilG_00183 [Lupinus angus... 130 3e-35
ref|XP_003620942.1| photosystem I assembly protein ycf3 [Medicag... 130 3e-35
ref|XP_003599571.2| photosystem I assembly protein ycf3 [Medicag... 126 7e-34
ref|YP_009471629.1| hypothetical chloroplast RF34 (chloroplast) ... 110 2e-26
ref|YP_006503792.1| photosystem I assembly protein Ycf3 (chlorop... 110 2e-26
gb|AIP85231.1| Ycf3 (chloroplast) [Camellia sinensis] 108 4e-26
ref|YP_009162878.1| photosystem I assembly protein ycf3 (chlorop... 108 4e-26
gb|OTF84572.1| putative photosystem I assembly protein Ycf3 [Hel... 108 7e-26
ref|YP_009336379.1| hypothetical chloroplast RF34 (chloroplast) ... 105 9e-26
ref|XP_016652512.1| PREDICTED: photosystem I assembly protein Yc... 108 1e-25
ref|YP_009447733.1| photosystem I assembly protein ycf3 (chlorop... 108 1e-25
ref|YP_009326114.1| photosystem I assembly protein ycf3 (chlorop... 107 1e-25
ref|YP_009366181.1| photosystem I assembly protein Ycf3 (plastid... 108 1e-25
gb|AVM83770.1| photosystem I assembly protein ycf3 (chloroplast)... 108 1e-25
gb|AVM83359.1| photosystem I assembly protein ycf3 (chloroplast)... 108 1e-25
gb|AVM82691.1| photosystem I assembly protein ycf3 (chloroplast)... 108 1e-25
gb|AVM81916.1| photosystem I assembly protein ycf3 (chloroplast)... 108 1e-25
ref|YP_009437020.1| photosystem I assembly factor I (plastid) [G... 108 1e-25
ref|YP_009435934.1| photosystem I assembly factor I (plastid) [C... 108 1e-25
>gb|ERN02875.1| hypothetical protein AMTR_s00334p00015220 [Amborella trichopoda]
Length = 70
Score = 135 bits (341), Expect = 2e-37
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = -1
Query: 259 MR*ETLKYGSKGRN*STYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAH 80
MR ETLKYGSKGRN S YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQA+ALTPGNYIEA
Sbjct: 1 MRSETLKYGSKGRNLSAYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQALALTPGNYIEAQ 60
Query: 79 NWLKITRRFE 50
NWLKITRRFE
Sbjct: 61 NWLKITRRFE 70
>gb|OIW17041.1| hypothetical protein TanjilG_00183 [Lupinus angustifolius]
Length = 70
Score = 130 bits (326), Expect = 3e-35
Identities = 64/70 (91%), Positives = 64/70 (91%)
Frame = -1
Query: 259 MR*ETLKYGSKGRN*STYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAH 80
MR ETLKYGSKGRN TYSDRGEQAIRQG SEIAEAWFDQAAEYWKQAIALTPGNYIEA
Sbjct: 1 MRQETLKYGSKGRNLLTYSDRGEQAIRQGYSEIAEAWFDQAAEYWKQAIALTPGNYIEAQ 60
Query: 79 NWLKITRRFE 50
NWLKIT RFE
Sbjct: 61 NWLKITGRFE 70
>ref|XP_003620942.1| photosystem I assembly protein ycf3 [Medicago truncatula]
gb|AES77160.1| photosystem I assembly protein ycf3 [Medicago truncatula]
Length = 70
Score = 130 bits (326), Expect = 3e-35
Identities = 62/67 (92%), Positives = 63/67 (94%)
Frame = -1
Query: 250 ETLKYGSKGRN*STYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWL 71
ETLKYGSKGRN TYSDRGEQAIRQGDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWL
Sbjct: 4 ETLKYGSKGRNLLTYSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWL 63
Query: 70 KITRRFE 50
KIT RFE
Sbjct: 64 KITGRFE 70
>ref|XP_003599571.2| photosystem I assembly protein ycf3 [Medicago truncatula]
gb|AES69822.2| photosystem I assembly protein ycf3 [Medicago truncatula]
Length = 70
Score = 126 bits (317), Expect = 7e-34
Identities = 61/67 (91%), Positives = 62/67 (92%)
Frame = -1
Query: 250 ETLKYGSKGRN*STYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWL 71
ETLKYGSKGRN T SDRGEQAIRQGDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWL
Sbjct: 4 ETLKYGSKGRNLLTNSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWL 63
Query: 70 KITRRFE 50
KIT RFE
Sbjct: 64 KITGRFE 70
>ref|YP_009471629.1| hypothetical chloroplast RF34 (chloroplast) [Parrotia subaequalis]
gb|AVI15297.1| hypothetical chloroplast RF34 (chloroplast) [Parrotia subaequalis]
gb|AVI15384.1| hypothetical chloroplast RF34 (chloroplast) [Parrotia subaequalis]
Length = 169
Score = 110 bits (276), Expect = 2e-26
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = -1
Query: 202 DRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
DRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 119 DRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 169
>ref|YP_006503792.1| photosystem I assembly protein Ycf3 (chloroplast) [Datura
stramonium]
gb|AEQ36939.1| photosystem I assembly protein Ycf3 (chloroplast) [Datura
stramonium]
gb|AEQ37090.1| photosystem I assembly protein Ycf3 (chloroplast) [Datura
stramonium]
Length = 170
Score = 110 bits (276), Expect = 2e-26
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = -1
Query: 208 YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
YS RGEQAI+QGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 118 YSGRGEQAIQQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 170
>gb|AIP85231.1| Ycf3 (chloroplast) [Camellia sinensis]
Length = 126
Score = 108 bits (270), Expect = 4e-26
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = -1
Query: 199 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 77 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 126
>ref|YP_009162878.1| photosystem I assembly protein ycf3 (chloroplast) [Rheum palmatum]
ref|YP_009429354.1| photosystem I assembly protein ycf3 (plastid) [Rheum wittrockii]
gb|ABY79733.1| photosystem I assembly protein ycf3 (chloroplast) [Fagopyrum
esculentum subsp. ancestrale]
gb|AKT93624.1| photosystem I assembly protein ycf3 (chloroplast) [Rheum palmatum]
gb|ASW26401.1| photosystem I assembly protein ycf3 (plastid) [Rheum wittrockii]
Length = 130
Score = 108 bits (270), Expect = 4e-26
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = -1
Query: 199 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 81 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 130
>gb|OTF84572.1| putative photosystem I assembly protein Ycf3 [Helianthus annuus]
Length = 137
Score = 108 bits (269), Expect = 7e-26
Identities = 50/54 (92%), Positives = 51/54 (94%)
Frame = -1
Query: 211 TYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
T+ GEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 84 THLSTGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 137
>ref|YP_009336379.1| hypothetical chloroplast RF34 (chloroplast) [Nicotiana otophora]
gb|ALT14474.1| hypothetical chloroplast RF34 (chloroplast) [Nicotiana otophora]
Length = 50
Score = 105 bits (261), Expect = 9e-26
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = -1
Query: 196 GEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
GEQAI+QGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 2 GEQAIQQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
>ref|XP_016652512.1| PREDICTED: photosystem I assembly protein Ycf3 [Prunus mume]
Length = 177
Score = 108 bits (271), Expect = 1e-25
Identities = 51/59 (86%), Positives = 54/59 (91%)
Frame = -1
Query: 226 GRN*STYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
GR+ YSDRGEQA++QG SEIAEAWFDQAAEYWKQAIALTPGNYIEA NWLKITRRFE
Sbjct: 119 GRDLPPYSDRGEQAVQQGYSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLKITRRFE 177
>ref|YP_009447733.1| photosystem I assembly protein ycf3 (chloroplast) [Vitis ficifolia]
dbj|BBB38407.1| photosystem I assembly protein ycf3 (chloroplast) [Vitis ficifolia]
Length = 165
Score = 108 bits (270), Expect = 1e-25
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = -1
Query: 199 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 116 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 165
>ref|YP_009326114.1| photosystem I assembly protein ycf3 (chloroplast) [Oxyria sinensis]
gb|APD26343.1| photosystem I assembly protein ycf3 (chloroplast) [Oxyria sinensis]
Length = 130
Score = 107 bits (267), Expect = 1e-25
Identities = 49/50 (98%), Positives = 50/50 (100%)
Frame = -1
Query: 199 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
RGEQAIRQGDSEIAEAWFDQAAEYWKQAI+LTPGNYIEAHNWLKITRRFE
Sbjct: 81 RGEQAIRQGDSEIAEAWFDQAAEYWKQAISLTPGNYIEAHNWLKITRRFE 130
>ref|YP_009366181.1| photosystem I assembly protein Ycf3 (plastid) [Jasminum sambac]
ref|YP_009365926.1| photosystem I assembly protein Ycf3 (plastid) [Jasminum tortuosum]
gb|ARJ61430.1| photosystem I assembly protein Ycf3 (plastid) [Jasminum tortuosum]
gb|ARJ61771.1| photosystem I assembly protein Ycf3 (plastid) [Jasminum sambac]
Length = 167
Score = 108 bits (270), Expect = 1e-25
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = -1
Query: 199 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 118 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 167
>gb|AVM83770.1| photosystem I assembly protein ycf3 (chloroplast) [Adenocalymma
gracielzae]
Length = 168
Score = 108 bits (270), Expect = 1e-25
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = -1
Query: 199 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>gb|AVM83359.1| photosystem I assembly protein ycf3 (chloroplast) [Adenocalymma
coriaceum]
Length = 168
Score = 108 bits (270), Expect = 1e-25
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = -1
Query: 199 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>gb|AVM82691.1| photosystem I assembly protein ycf3 (chloroplast) [Podranea
ricasoliana]
Length = 168
Score = 108 bits (270), Expect = 1e-25
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = -1
Query: 199 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>gb|AVM81916.1| photosystem I assembly protein ycf3 (chloroplast) [Tecomaria
capensis]
Length = 168
Score = 108 bits (270), Expect = 1e-25
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = -1
Query: 199 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>ref|YP_009437020.1| photosystem I assembly factor I (plastid) [Grammatotheca bergiana]
gb|ATG27396.1| photosystem I assembly factor I (plastid) [Grammatotheca bergiana]
Length = 168
Score = 108 bits (270), Expect = 1e-25
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = -1
Query: 199 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>ref|YP_009435934.1| photosystem I assembly factor I (plastid) [Carpodetus serratus]
gb|ATG26112.1| photosystem I assembly factor I (plastid) [Carpodetus serratus]
Length = 168
Score = 108 bits (270), Expect = 1e-25
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = -1
Query: 199 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 50
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168