BLASTX nr result
ID: Rehmannia30_contig00031447
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00031447
(635 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011087879.1| putative pumilio homolog 7, chloroplastic [S... 151 1e-38
ref|XP_020553077.1| putative pumilio homolog 8, chloroplastic [S... 150 2e-38
ref|XP_022861292.1| putative pumilio homolog 8, chloroplastic [O... 118 5e-27
ref|XP_022865438.1| putative pumilio homolog 10 [Olea europaea v... 110 3e-24
gb|KZV34637.1| pumilio7, chloroplastic [Dorcoceras hygrometricum] 100 5e-21
gb|PIN02045.1| Translational repressor Pumilio/PUF3 and related ... 92 8e-18
gb|PIN06953.1| Translational repressor MPT5/PUF4 and related RNA... 78 4e-13
ref|XP_022872693.1| pumilio homolog 2-like [Olea europaea var. s... 66 6e-09
ref|XP_010645385.1| PREDICTED: putative pumilio homolog 7, chlor... 64 3e-08
>ref|XP_011087879.1| putative pumilio homolog 7, chloroplastic [Sesamum indicum]
Length = 776
Score = 151 bits (381), Expect = 1e-38
Identities = 109/274 (39%), Positives = 138/274 (50%), Gaps = 70/274 (25%)
Frame = +1
Query: 22 DRSVNGTVGMSFESYGTCDNYYRNDLSDWIGYDLSVPGNSVNFPGEISSPMVEMQHNQIY 201
DRS NG + ++FE YGT DNY R D+ G++LSVP +NF GE+ S +VEMQH+
Sbjct: 191 DRSPNGAMRVNFEKYGTSDNY-RKYFPDYGGFNLSVPRGPMNFEGEVGSELVEMQHDPRI 249
Query: 202 VS-----------DGMFCRSDFGNSTLSPQFYRNDVLANNNYPMGCVVPNYNSSLGNPSF 348
VS DG+ RSDFGNS LSPQF R ++LANNN+PMG + + +S+L PS
Sbjct: 250 VSLSRSRSSPGRFDGLLSRSDFGNSGLSPQFCRGNLLANNNFPMGFALSDVSSTL-RPSL 308
Query: 349 GNTLLYPSQ---NRIEARGPYYPT------------NEENLIRYPP---NRRNK------ 456
G++ Y S+ N IEAR YP NEE+L+ Y P N RN
Sbjct: 309 GDSFFYASRNGMNLIEARDACYPPNVVQLAHLIPPYNEEDLLHYRPPLLNGRNNLHVRVP 368
Query: 457 ----GPFRRDGSLVIQGEGIDYGTTR-LARPLGYKT------------------------ 549
F R+ SL+IQGEGI+YG R AR G T
Sbjct: 369 QGSVEAFAREDSLIIQGEGINYGMNREQARSRGQNTTKGLHHDSVAGKPQEKRSQLDSCL 428
Query: 550 ------KSFGNPKMCCPLLVQSKFCSLSEAQGYI 633
+PKM P + SK SL+EAQGYI
Sbjct: 429 HVAAVQDGSRSPKMFFPFSLPSKCSSLAEAQGYI 462
>ref|XP_020553077.1| putative pumilio homolog 8, chloroplastic [Sesamum indicum]
Length = 779
Score = 150 bits (380), Expect = 2e-38
Identities = 108/277 (38%), Positives = 141/277 (50%), Gaps = 67/277 (24%)
Frame = +1
Query: 4 SLSPYV----DRSVNGTVGMSFESYGTCDNYYRNDLSDWIGYDLSVPGNSVNFPGEISSP 171
S++PY D+S+NG GMSF+ Y DNY R DLSDW G LSVP +NF G++
Sbjct: 171 SVAPYGIQCRDQSLNGPRGMSFDKYRASDNY-RKDLSDWGGIHLSVPIRPMNFEGQVGLL 229
Query: 172 MVEMQHNQIYVSDGMFCRSDFGNSTLSPQFYRNDVLANNNYPMGCVVPNYNSSLGNPSFG 351
+Q SD +F RSDFGNS LSPQFYR ++ ANNN+P+G V N +SS+ N S G
Sbjct: 230 GSCYSPSQ---SDRLFSRSDFGNSALSPQFYRCNMSANNNFPVGLSVSNVSSSIDNSSAG 286
Query: 352 NTLLY-PSQN-----------------RIEARGPYYPTNEENLIRYP---PNRRNK---- 456
LY PS+N R+ P+Y NEENL+ Y PN R+K
Sbjct: 287 GGSLYHPSRNGMNLTESEHAVYSPNVVRLAQLMPHY--NEENLLHYQPPVPNGRDKVPLC 344
Query: 457 --------GPFRRDGSLVIQGEGIDYGTTRLARPLGYKTKSF------------------ 558
PF R+ SL +QG+G +YG TR ARP G T+SF
Sbjct: 345 AGVPQVSVEPFTREDSLFLQGKGFNYGMTRHARPRGQNTRSFHHGSGSGKIQEKGSQLDG 404
Query: 559 ------------GNPKMCCPLLVQSKFCSLSEAQGYI 633
+PKM CP ++ + SL+EA+G+I
Sbjct: 405 SHRHNAAVQDCSQSPKMYCPHVLSTTCSSLAEARGHI 441
>ref|XP_022861292.1| putative pumilio homolog 8, chloroplastic [Olea europaea var.
sylvestris]
Length = 748
Score = 118 bits (295), Expect = 5e-27
Identities = 89/265 (33%), Positives = 131/265 (49%), Gaps = 61/265 (23%)
Frame = +1
Query: 22 DRSVNGTVGMSFESYGTCDNYYRNDLSDWIGYDLSVPGNSVNFPGEISSPMVEM----QH 189
D+SV+G + M+FE++ DNY R S++ G++ S+P N +NF GE+ S + M +
Sbjct: 171 DQSVDGPIRMNFENFWASDNY-RRGFSEYRGFNASLPRNPMNFDGEMVSALAAMLPYSKM 229
Query: 190 NQIY-------VSDGMFCRSDFGNSTLSPQFYRNDVLANNNYPMGCVVPNYNSSLGNPSF 348
++ S+G+F R+++GNS SPQFY N+ A N +PMG +S+L PSF
Sbjct: 230 GNLFGSRYSPGASEGLFARTEYGNSDKSPQFYNNNASAGNYFPMGISTSRPSSTLRRPSF 289
Query: 349 GNTLLYPSQ---NRIEARGPYYPT------------NEENLIRY---PPNRRNKGP---- 462
++ Y SQ N I+ RGP++ N ENL+ Y PN RN+ P
Sbjct: 290 VDSSYYASQNGTNLIQDRGPFHSPNMLRLAHLIPQFNVENLLHYQLPAPNGRNRLPLHFR 349
Query: 463 --------FRRDGSLVIQGEGIDYGTTR-LARP-----LGY--------------KTKSF 558
F D SL +Q +G++ R +RP LG+ +S
Sbjct: 350 EPQRGVEAFAGDESLFLQEDGLNNAINRGCSRPKFKNTLGFMHESGTGKAQEIAGAQESG 409
Query: 559 GNPKMCCPLLVQSKFCSLSEAQGYI 633
KM CP + SK SL+EAQGYI
Sbjct: 410 RTAKMHCPFSLPSKCSSLTEAQGYI 434
>ref|XP_022865438.1| putative pumilio homolog 10 [Olea europaea var. sylvestris]
Length = 747
Score = 110 bits (275), Expect = 3e-24
Identities = 85/276 (30%), Positives = 136/276 (49%), Gaps = 65/276 (23%)
Frame = +1
Query: 1 VSLSP----YVDRSVNGTVGMSFESYGTCDNYYRNDLSDWIGYDLSVPGNSVNFPGEISS 168
+S SP + D+SV+G + M+FE++ + D+Y R S+ G++ S+P + + F GE+ S
Sbjct: 159 ISFSPNGFQFRDQSVDGPIRMNFENFMSSDDY-RRGFSERRGFNSSIPRSPMKFDGEMDS 217
Query: 169 PMV---------EMQHNQIY--VSDGMFCRSDFGNSTLSPQFYRNDVLANNNYPMGCVVP 315
++ + ++ Y S+G+F R++ GNS SPQFY+N+V A N +PMG
Sbjct: 218 ALLAIPPDSRMGNLLGHRYYPGASEGLFARTECGNSASSPQFYKNNVPAGNYFPMGISAS 277
Query: 316 NYNSSLGNPSFGNTLLYPSQNR---IEARGPYYPT------------NEENLIRYP---P 441
+S+L PSF ++ Y SQNR I+ P++ N ENL+ Y P
Sbjct: 278 KPSSTLKRPSFVDSSFYASQNRTNPIKDVDPFHSPYMLQLAQLIPQFNVENLLHYQQPVP 337
Query: 442 NRRNKGP------------FRRDGSLVIQGEGIDYGT--------------------TRL 525
N RN+ P F + SL++QG+G++Y TR
Sbjct: 338 NGRNRLPSHVRVPRGDVEAFPGEDSLILQGDGLNYAINKGCGHPSVQNAKSSMHGSGTRK 397
Query: 526 ARPLGYKTKSFGNPKMCCPLLVQSKFCSLSEAQGYI 633
A+ + +S +M P + SK SL++AQGYI
Sbjct: 398 AQEIAGLQESGRTTRMHIPFSLPSKCSSLTDAQGYI 433
>gb|KZV34637.1| pumilio7, chloroplastic [Dorcoceras hygrometricum]
Length = 746
Score = 100 bits (250), Expect = 5e-21
Identities = 89/272 (32%), Positives = 121/272 (44%), Gaps = 72/272 (26%)
Frame = +1
Query: 34 NGTVGMSFESYGTCDNYYRNDLSDWIGYDLSVPGN-SVNFPGEISSPMVEMQHNQIYVS- 207
N V M+FE +G D+Y R S + G++ S+P + N G ++ VEMQH Q
Sbjct: 162 NEEVLMNFEKFGAYDSY-RKGFSGYGGFNPSIPIRPTTNIEGGMNPVFVEMQHQQRITDL 220
Query: 208 ----------DGMFCRSDFGNSTLSPQFYRNDVLANNNYPMGCVVPNYNSSLGNPSFGNT 357
+ MF RS+F S PQ YR+ VL N +PMG V N +S+L P G+
Sbjct: 221 LGSQNLPSRPESMFPRSEFAISGQGPQSYRSSVLIRNPFPMGFAVSNSSSTLNRPFAGDA 280
Query: 358 LLYPSQNRI---EARGPYY------------PTNEENLIRYPP---NRRNKGP------- 462
LYPSQN I E+R Y +N ENLI P + +N+ P
Sbjct: 281 PLYPSQNDINLTESRNDVYLPNVVQLGRSIPQSNVENLINSQPLVSDGKNRVPLCVRAPH 340
Query: 463 -----FRRDGSLVIQGEGIDYGTTR--------LARPLGYKT---KSFG----------- 561
F D SL+IQGEG++YG R + + ++T K G
Sbjct: 341 GSVEAFTNDDSLIIQGEGVNYGINRGYIRSRENIHKDFIHETCAEKGQGKRSDFDSHLHI 400
Query: 562 --------NPKMCCPLLVQSKFCSLSEAQGYI 633
N K+C P + K SL+EAQGYI
Sbjct: 401 AAIQDTRLNLKLCRPFQLPPKCNSLTEAQGYI 432
>gb|PIN02045.1| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) [Handroanthus impetiginosus]
Length = 668
Score = 91.7 bits (226), Expect = 8e-18
Identities = 78/212 (36%), Positives = 101/212 (47%), Gaps = 6/212 (2%)
Frame = +1
Query: 16 YVDRSVNGTVGMSFESYGTCDNYYRNDLSDWIGYDLSVPGNSVNFPGEISSPMVEMQHNQ 195
Y ++SVNG GMSFE +G D YY D G+ L N G SP
Sbjct: 171 YCEQSVNGAPGMSFEKHGAYD-YYGKGFKDSRGFSL-CHSRMANVMGSQYSPR------- 221
Query: 196 IYVSDGMFCRSDFGNSTLSPQFYRNDVLANNNYPMGCVV--PNYNSSLGNPSFGNTLLYP 369
+S F NS LSP+F R +VLANN +P+G VV + + SL PS +T YP
Sbjct: 222 ---------QSRFDNSALSPRF-RENVLANNKFPVGRVVLDVSVSPSLDTPSVSDTSFYP 271
Query: 370 SQNRIEARGPYYPTNEENLIRYPPNRRNKGPFRRDGSLVIQGEGIDYGTTRLARPLGYKT 549
SQN P Y NE NL++ P N GP +G+ +YG TR Y++
Sbjct: 272 SQN--YQLTPRY--NEVNLLQTLPFVSNGGP-----QAFTRGQSTNYGMTRHTHTKMYRS 322
Query: 550 K----SFGNPKMCCPLLVQSKFCSLSEAQGYI 633
+ S +P+M P V K SL+EAQG I
Sbjct: 323 QPDQDSCQSPRMHSPYTVAPKCSSLAEAQGSI 354
>gb|PIN06953.1| Translational repressor MPT5/PUF4 and related RNA-binding proteins
(Puf superfamily) [Handroanthus impetiginosus]
Length = 742
Score = 78.2 bits (191), Expect = 4e-13
Identities = 80/283 (28%), Positives = 109/283 (38%), Gaps = 89/283 (31%)
Frame = +1
Query: 52 SFESYGTCDNYYRNDLSDWIGYDLSVPGNSVNFPGEISSPMVEMQHNQIYVS-------- 207
SFE G + Y R S G++ SVP NF + MQH+Q +
Sbjct: 181 SFEKNGASE-YNRKGFSGCGGFNFSVPRGHRNFEADA---FAGMQHDQRIANLSQLSPSR 236
Query: 208 -DGMFCRSDFGNSTLSPQFYRNDVLANNNY--------------------------PMGC 306
+ +F +SDFGNS SPQ YR +V ANNN+ P+G
Sbjct: 237 PERLFYQSDFGNSVSSPQLYRTNVFANNNFTMESDFGNSASSPQFHRTNMLDNKDIPVGF 296
Query: 307 VVPNYNSSLGNPSFGNTLL---------------YPSQNRIEARGPYYPTNEENLIRYP- 438
+ +S+L PS G+T + S N ++ N+ENL +
Sbjct: 297 AAQDVSSALNWPSLGDTCTRAPRKGMTLNEAWDPFCSANVVQLAHQAPRYNQENLHEWQS 356
Query: 439 --PNRRNKGP------FRRDGSLVIQGEGIDYGTTR-----LARPLGYKTKSFGN----- 564
PN RN+ P F R+ S++IQGEGI+YG + GY GN
Sbjct: 357 LVPNGRNRVPQRSIEAFLREDSVIIQGEGINYGMNEGHALSRGQNTGYLHHESGNGKPQE 416
Query: 565 --------------------PKMCCPLLVQSKFCSLSEAQGYI 633
PKM P + SK SL+E QG I
Sbjct: 417 KRSHLDGRLQVAAVQDGGWSPKMVSPFSMPSKCSSLAEVQGCI 459
>ref|XP_022872693.1| pumilio homolog 2-like [Olea europaea var. sylvestris]
Length = 579
Score = 65.9 bits (159), Expect = 6e-09
Identities = 75/271 (27%), Positives = 109/271 (40%), Gaps = 60/271 (22%)
Frame = +1
Query: 1 VSLSP----YVDRSVNGTVGMSFESYGTCDNYYRNDLSDWIGYDLSVPGNSVNFPGEISS 168
VS SP D+S++G V MS + G NY + DW ++ V + VNF G++
Sbjct: 149 VSASPNGNQICDQSMSGVVRMSSDKNGESVNYGKG-FPDWGRFNSYVLRSPVNFEGQVGI 207
Query: 169 PMVEMQHNQI------YVSDGMFCRSDFGNSTLSPQFYRNDVLANNNYPMGCVVPNYNSS 330
N + SD +F +SD NS LS QFYR ++ N++ +G V +SS
Sbjct: 208 QHDYRMDNSLGSRYSPVRSDRLFAQSDCENSALSSQFYRANLQTGNHFLVG-VSALISSS 266
Query: 331 LGNPSFGNTLLYPSQNRIEARGPYYPTN------------EENLIRYP---PNRRNKGP- 462
L P N I+ R + +N NL+ + PN R+K P
Sbjct: 267 LNRPDTSINASRNGMNLIDGRDAFSSSNVLQSTHLMSQFSAPNLLHFQQPTPNGRSKVPA 326
Query: 463 -----------FRRDGSLVIQGEGIDYGT-------------------TRL---ARPLGY 543
R+ L++QGE ++ TRL P
Sbjct: 327 HVRVPERIVKGLTRENGLIVQGEDLNGAMKRRYECSRGQSTLDFVPQETRLQLDVHPNVA 386
Query: 544 KTKSFGN-PKMCCPLLVQSKFCSLSEAQGYI 633
KT+ G + P + SK SL+EAQGYI
Sbjct: 387 KTQESGRCARTHSPFTISSKCSSLAEAQGYI 417
>ref|XP_010645385.1| PREDICTED: putative pumilio homolog 7, chloroplastic [Vitis
vinifera]
Length = 785
Score = 63.9 bits (154), Expect = 3e-08
Identities = 69/264 (26%), Positives = 109/264 (41%), Gaps = 69/264 (26%)
Frame = +1
Query: 49 MSFESYGTCDNYYRNDLSDWIGYDLSVPGNSVNFPGEISSPMVEMQH----NQIYVSDGM 216
++ E Y + N+ R SD++G+ SVP + ++F GEISS + +Q ++ S
Sbjct: 209 INVEKYRSSHNF-RKGYSDYLGHQFSVPTSPMSFGGEISSALPGLQQEYGPGNLFGSGLS 267
Query: 217 FCRSD------FGNSTLSPQFYRNDVLANNNYPMGCVVPNYNSSLGNPSFGNTLLYPSQN 378
CRSD + NS++S + + N G V N + S+ S + L Y Q
Sbjct: 268 SCRSDLLSRLNYYNSSMSSLWQKPMEQTGNYNQRGIPVSNVSPSINRLSMTDALFYAQQK 327
Query: 379 RI---EARG----PYYP--------TNEENLIRYP---PNRRNKGP------------FR 468
R+ E RG P +P N ENL++Y + R + P F
Sbjct: 328 RMNLNEERGVLNLPNFPELNHPRPCLNMENLLQYSLPISSGRGRAPSNIKISQGGLEDFT 387
Query: 469 RDGSLVIQGEGIDY-----------------GTTRLARPLGYKTKSFG------------ 561
+ S +IQGEG++Y T + + T+ G
Sbjct: 388 SEDSFIIQGEGLNYVINKGFDGSKGNFKGSSAETGVGKSEEKMTQLDGRSQFSGICENGW 447
Query: 562 NPKMCCPLLVQSKFCSLSEAQGYI 633
N ++ CP + K+ SL EAQG+I
Sbjct: 448 NSRLYCPFSLPPKYNSLVEAQGHI 471