BLASTX nr result

ID: Rehmannia30_contig00029480 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00029480
         (408 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011095572.1| far upstream element-binding protein 2 isofo...    54   9e-06
ref|XP_011095563.1| far upstream element-binding protein 2 isofo...    54   9e-06

>ref|XP_011095572.1| far upstream element-binding protein 2 isoform X2 [Sesamum indicum]
          Length = 727

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 31/62 (50%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +1

Query: 7   SGYAQLSQTQHSYDQSGGYGSVPASGGYG-NVPASAGYGKXXXXXXXXXXXXXXXXMYGA 183
           SGYAQ SQTQ  YDQ+GGYG+VPA  GYG +V   A Y +                MYGA
Sbjct: 677 SGYAQPSQTQPGYDQAGGYGNVPAPAGYGKSVSPQAAYAQ-----------YDSSQMYGA 725

Query: 184 HR 189
           HR
Sbjct: 726 HR 727


>ref|XP_011095563.1| far upstream element-binding protein 2 isoform X1 [Sesamum indicum]
          Length = 728

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 31/62 (50%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +1

Query: 7   SGYAQLSQTQHSYDQSGGYGSVPASGGYG-NVPASAGYGKXXXXXXXXXXXXXXXXMYGA 183
           SGYAQ SQTQ  YDQ+GGYG+VPA  GYG +V   A Y +                MYGA
Sbjct: 678 SGYAQPSQTQPGYDQAGGYGNVPAPAGYGKSVSPQAAYAQ-----------YDSSQMYGA 726

Query: 184 HR 189
           HR
Sbjct: 727 HR 728


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