BLASTX nr result

ID: Rehmannia30_contig00029459 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00029459
         (422 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KJB06352.1| hypothetical protein B456_001G000500 [Gossypium r...    55   2e-06
ref|XP_016720557.1| PREDICTED: probable ribonuclease P/MRP prote...    53   8e-06
ref|XP_012434104.1| PREDICTED: probable ribonuclease P/MRP prote...    53   8e-06

>gb|KJB06352.1| hypothetical protein B456_001G000500 [Gossypium raimondii]
          Length = 154

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 25/47 (53%), Positives = 34/47 (72%)
 Frame = +1

Query: 277 GNLISVRKNHLKCDKLKFELLKLLAWDCLSSEINRFMQNCLPKIRIL 417
           GN+ + +   LKCD+LKFE  KL+   CLS+++ + MQNCL KIRIL
Sbjct: 106 GNIKACKTATLKCDELKFEQYKLMVGACLSADVTQHMQNCLEKIRIL 152


>ref|XP_016720557.1| PREDICTED: probable ribonuclease P/MRP protein subunit POP5
           [Gossypium hirsutum]
 ref|XP_016720558.1| PREDICTED: probable ribonuclease P/MRP protein subunit POP5
           [Gossypium hirsutum]
          Length = 154

 Score = 52.8 bits (125), Expect = 8e-06
 Identities = 24/47 (51%), Positives = 34/47 (72%)
 Frame = +1

Query: 277 GNLISVRKNHLKCDKLKFELLKLLAWDCLSSEINRFMQNCLPKIRIL 417
           G++ + +   LKCD+LKFE  KL+   CLS+++ + MQNCL KIRIL
Sbjct: 106 GSIKACKTATLKCDELKFEQYKLMVGACLSADVTQHMQNCLEKIRIL 152


>ref|XP_012434104.1| PREDICTED: probable ribonuclease P/MRP protein subunit POP5
           [Gossypium raimondii]
 ref|XP_012440718.1| PREDICTED: probable ribonuclease P/MRP protein subunit POP5
           [Gossypium raimondii]
 ref|XP_012447714.1| PREDICTED: probable ribonuclease P/MRP protein subunit POP5
           [Gossypium raimondii]
 ref|XP_012453878.1| PREDICTED: probable ribonuclease P/MRP protein subunit POP5
           [Gossypium raimondii]
 ref|XP_012460866.1| PREDICTED: probable ribonuclease P/MRP protein subunit POP5
           [Gossypium raimondii]
 ref|XP_012466605.1| PREDICTED: probable ribonuclease P/MRP protein subunit POP5
           [Gossypium raimondii]
 ref|XP_012467262.1| PREDICTED: probable ribonuclease P/MRP protein subunit POP5
           [Gossypium raimondii]
 gb|KJB06349.1| hypothetical protein B456_001G000500 [Gossypium raimondii]
 gb|KJB06351.1| hypothetical protein B456_001G000500 [Gossypium raimondii]
 gb|KJB06353.1| hypothetical protein B456_001G000500 [Gossypium raimondii]
          Length = 154

 Score = 52.8 bits (125), Expect = 8e-06
 Identities = 24/47 (51%), Positives = 34/47 (72%)
 Frame = +1

Query: 277 GNLISVRKNHLKCDKLKFELLKLLAWDCLSSEINRFMQNCLPKIRIL 417
           G++ + +   LKCD+LKFE  KL+   CLS+++ + MQNCL KIRIL
Sbjct: 106 GSIKACKTATLKCDELKFEQYKLMVGACLSADVTQHMQNCLEKIRIL 152


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