BLASTX nr result
ID: Rehmannia30_contig00029421
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00029421
(401 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_022895144.1| pentatricopeptide repeat-containing protein ... 119 1e-28
gb|EYU26465.1| hypothetical protein MIMGU_mgv1a003385mg [Erythra... 119 1e-28
ref|XP_012850390.1| PREDICTED: pentatricopeptide repeat-containi... 119 1e-28
ref|XP_019250203.1| PREDICTED: pentatricopeptide repeat-containi... 112 5e-26
ref|XP_016512198.1| PREDICTED: pentatricopeptide repeat-containi... 112 5e-26
ref|XP_018626541.1| PREDICTED: pentatricopeptide repeat-containi... 110 2e-25
ref|XP_016436453.1| PREDICTED: pentatricopeptide repeat-containi... 108 8e-25
ref|XP_009768253.1| PREDICTED: pentatricopeptide repeat-containi... 108 8e-25
ref|XP_011087669.1| pentatricopeptide repeat-containing protein ... 108 1e-24
ref|XP_015080445.1| PREDICTED: pentatricopeptide repeat-containi... 106 4e-24
gb|PHT76481.1| Pentatricopeptide repeat-containing protein, chlo... 105 1e-23
gb|PHT43231.1| Pentatricopeptide repeat-containing protein, chlo... 105 1e-23
ref|XP_016579085.1| PREDICTED: pentatricopeptide repeat-containi... 105 1e-23
gb|PHU12219.1| Pentatricopeptide repeat-containing protein, chlo... 105 1e-23
ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containi... 105 1e-23
ref|XP_019194364.1| PREDICTED: pentatricopeptide repeat-containi... 101 2e-22
gb|EEF34347.1| pentatricopeptide repeat-containing protein, puta... 95 2e-21
gb|OVA15719.1| Pentatricopeptide repeat [Macleaya cordata] 97 9e-21
gb|PON99747.1| Pentatricopeptide repeat [Trema orientalis] 96 2e-20
ref|XP_022718335.1| pentatricopeptide repeat-containing protein ... 96 2e-20
>ref|XP_022895144.1| pentatricopeptide repeat-containing protein At1g71460,
chloroplastic [Olea europaea var. sylvestris]
Length = 686
Score = 119 bits (299), Expect = 1e-28
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
FSPNQFTFKVVLHICEQ GFAD+A FF+ M RKYKIKASEEHY+SIIDLLT LGR+EEA
Sbjct: 616 FSPNQFTFKVVLHICEQAGFADEACGFFSSMIRKYKIKASEEHYSSIIDLLTRLGRVEEA 675
Query: 219 DKFIQLRSSLA 187
+ +IQLRSSL+
Sbjct: 676 ENYIQLRSSLS 686
>gb|EYU26465.1| hypothetical protein MIMGU_mgv1a003385mg [Erythranthe guttata]
Length = 588
Score = 119 bits (298), Expect = 1e-28
Identities = 56/70 (80%), Positives = 65/70 (92%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
FSPNQFTFKVVL ICEQGGFA+D+L FF+LM+RKY+IKASEEHY SI+DLLT LGR EEA
Sbjct: 517 FSPNQFTFKVVLRICEQGGFAEDSLRFFSLMSRKYRIKASEEHYGSIVDLLTRLGRTEEA 576
Query: 219 DKFIQLRSSL 190
++F+QLRSSL
Sbjct: 577 ERFVQLRSSL 586
>ref|XP_012850390.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic [Erythranthe guttata]
Length = 686
Score = 119 bits (298), Expect = 1e-28
Identities = 56/70 (80%), Positives = 65/70 (92%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
FSPNQFTFKVVL ICEQGGFA+D+L FF+LM+RKY+IKASEEHY SI+DLLT LGR EEA
Sbjct: 615 FSPNQFTFKVVLRICEQGGFAEDSLRFFSLMSRKYRIKASEEHYGSIVDLLTRLGRTEEA 674
Query: 219 DKFIQLRSSL 190
++F+QLRSSL
Sbjct: 675 ERFVQLRSSL 684
>ref|XP_019250203.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic [Nicotiana attenuata]
gb|OIT00855.1| pentatricopeptide repeat-containing protein, chloroplastic
[Nicotiana attenuata]
Length = 676
Score = 112 bits (279), Expect = 5e-26
Identities = 52/71 (73%), Positives = 61/71 (85%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
F+PN FTFKVV ICEQ GFAD+ FFT+MTRKYKIKASE+HYTSII+LL H+GRIEEA
Sbjct: 606 FNPNHFTFKVVFSICEQAGFADEGCQFFTMMTRKYKIKASEDHYTSIINLLYHVGRIEEA 665
Query: 219 DKFIQLRSSLA 187
+KF+ L+ SLA
Sbjct: 666 EKFVLLKQSLA 676
>ref|XP_016512198.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Nicotiana tabacum]
Length = 676
Score = 112 bits (279), Expect = 5e-26
Identities = 52/71 (73%), Positives = 61/71 (85%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
F+PN FTFKVV ICEQ GFAD+ FFT+MTRKYKIKASE+HYTSII+LL H+GRIEEA
Sbjct: 606 FNPNHFTFKVVFSICEQAGFADEGCQFFTMMTRKYKIKASEDHYTSIINLLHHVGRIEEA 665
Query: 219 DKFIQLRSSLA 187
+KF+ L+ SLA
Sbjct: 666 EKFVLLKQSLA 676
>ref|XP_018626541.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic [Nicotiana tomentosiformis]
Length = 676
Score = 110 bits (275), Expect = 2e-25
Identities = 51/70 (72%), Positives = 60/70 (85%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
F+PN FTFKVV ICEQ GFAD+ FFT+MTRKYKIKASE+HYTSII+LL H+GRIEEA
Sbjct: 606 FNPNHFTFKVVFSICEQAGFADEGCQFFTMMTRKYKIKASEDHYTSIINLLHHVGRIEEA 665
Query: 219 DKFIQLRSSL 190
+KF+ L+ SL
Sbjct: 666 EKFVLLKQSL 675
>ref|XP_016436453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Nicotiana tabacum]
Length = 676
Score = 108 bits (270), Expect = 8e-25
Identities = 50/70 (71%), Positives = 59/70 (84%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
F+PN FTFKVV ICE+ GFAD FFT+MTRKYKIKASE+HYTSII+LL H+GRIEEA
Sbjct: 606 FNPNHFTFKVVFSICEEAGFADQGCQFFTMMTRKYKIKASEDHYTSIINLLHHVGRIEEA 665
Query: 219 DKFIQLRSSL 190
+KF+ L+ SL
Sbjct: 666 EKFVLLKQSL 675
>ref|XP_009768253.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic [Nicotiana sylvestris]
Length = 676
Score = 108 bits (270), Expect = 8e-25
Identities = 50/70 (71%), Positives = 59/70 (84%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
F+PN FTFKVV ICE+ GFAD FFT+MTRKYKIKASE+HYTSII+LL H+GRIEEA
Sbjct: 606 FNPNHFTFKVVFSICEEAGFADQGCQFFTMMTRKYKIKASEDHYTSIINLLHHVGRIEEA 665
Query: 219 DKFIQLRSSL 190
+KF+ L+ SL
Sbjct: 666 EKFVLLKQSL 675
>ref|XP_011087669.1| pentatricopeptide repeat-containing protein At1g71460,
chloroplastic [Sesamum indicum]
ref|XP_011087671.1| pentatricopeptide repeat-containing protein At1g71460,
chloroplastic [Sesamum indicum]
ref|XP_020551576.1| pentatricopeptide repeat-containing protein At1g71460,
chloroplastic [Sesamum indicum]
Length = 692
Score = 108 bits (269), Expect = 1e-24
Identities = 54/71 (76%), Positives = 60/71 (84%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
FSPNQFTFKVVL ICEQGGFAD+A FFTLMT+KYKIKASEEHY+SII+LL G EEA
Sbjct: 622 FSPNQFTFKVVLSICEQGGFADEAKMFFTLMTQKYKIKASEEHYSSIINLLIRSGLTEEA 681
Query: 219 DKFIQLRSSLA 187
+KF+QL S A
Sbjct: 682 EKFMQLSSYAA 692
>ref|XP_015080445.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic [Solanum pennellii]
Length = 674
Score = 106 bits (265), Expect = 4e-24
Identities = 48/69 (69%), Positives = 59/69 (85%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
F+PN FTFKVV +ICE+ GFAD+ FFT+MTRKYKIKASE+HYTSII+LL H+GR EEA
Sbjct: 604 FNPNHFTFKVVFYICEKAGFADEGCQFFTMMTRKYKIKASEDHYTSIINLLHHVGRYEEA 663
Query: 219 DKFIQLRSS 193
+KF+ L+ S
Sbjct: 664 EKFVLLKQS 672
>gb|PHT76481.1| Pentatricopeptide repeat-containing protein, chloroplastic
[Capsicum annuum]
Length = 669
Score = 105 bits (262), Expect = 1e-23
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
F+PN FTFKVV ICE+ GFAD+ FFT+MT+KYKIKASE+HYTSII+LL H+GR +EA
Sbjct: 599 FNPNHFTFKVVFSICEKAGFADEGCQFFTMMTQKYKIKASEDHYTSIINLLHHVGRTKEA 658
Query: 219 DKFIQLRSSLA 187
+KF+ L+ SLA
Sbjct: 659 EKFVLLKQSLA 669
>gb|PHT43231.1| Pentatricopeptide repeat-containing protein, chloroplastic
[Capsicum baccatum]
Length = 669
Score = 105 bits (262), Expect = 1e-23
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
F+PN FTFKVV ICE+ GFAD+ FFT+MT+KYKIKASE+HYTSII+LL H+GR +EA
Sbjct: 599 FNPNHFTFKVVFSICEKAGFADEGCQFFTMMTQKYKIKASEDHYTSIINLLHHVGRTKEA 658
Query: 219 DKFIQLRSSLA 187
+KF+ L+ SLA
Sbjct: 659 EKFVLLKQSLA 669
>ref|XP_016579085.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic [Capsicum annuum]
Length = 903
Score = 105 bits (262), Expect = 1e-23
Identities = 48/71 (67%), Positives = 60/71 (84%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
F+PN FTFKVV ICE+ GFAD+ FFT+MT+KYKIKASE+HYTSII+LL H+GR +EA
Sbjct: 833 FNPNHFTFKVVFSICEKAGFADEGCQFFTMMTQKYKIKASEDHYTSIINLLHHVGRTKEA 892
Query: 219 DKFIQLRSSLA 187
+KF+ L+ SLA
Sbjct: 893 EKFVLLKQSLA 903
Score = 103 bits (258), Expect = 4e-23
Identities = 47/70 (67%), Positives = 59/70 (84%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
F+PN FTFKVV ICE+ GFAD+ FFT+MT+KYKIKASE+HYTSII+LL H+GR +EA
Sbjct: 584 FNPNHFTFKVVFSICEKAGFADEGCQFFTMMTQKYKIKASEDHYTSIINLLHHVGRTKEA 643
Query: 219 DKFIQLRSSL 190
+KF+ L+ SL
Sbjct: 644 EKFVLLKQSL 653
>gb|PHU12219.1| Pentatricopeptide repeat-containing protein, chloroplastic
[Capsicum chinense]
Length = 669
Score = 105 bits (261), Expect = 1e-23
Identities = 48/71 (67%), Positives = 59/71 (83%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
F+PN FTFKVV ICE+ GFAD+ FFT+MT+KYKIKASE+HYTSII+LL H+GR EA
Sbjct: 599 FNPNHFTFKVVFSICEKAGFADEGCQFFTMMTQKYKIKASEDHYTSIINLLHHVGRTREA 658
Query: 219 DKFIQLRSSLA 187
+KF+ L+ SLA
Sbjct: 659 EKFVLLKQSLA 669
>ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic [Solanum lycopersicum]
Length = 674
Score = 105 bits (261), Expect = 1e-23
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
F+PN FTFKVVL ICE+ GFAD+ FFT+MTRKYKIKASE+HYTSII+LL H+G EEA
Sbjct: 604 FNPNHFTFKVVLSICEKAGFADEGCQFFTMMTRKYKIKASEDHYTSIINLLHHVGHYEEA 663
Query: 219 DKFIQLRSS 193
+KF+ L+ S
Sbjct: 664 EKFVLLKQS 672
>ref|XP_019194364.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic [Ipomoea nil]
Length = 695
Score = 101 bits (252), Expect = 2e-22
Identities = 47/69 (68%), Positives = 56/69 (81%)
Frame = -3
Query: 396 SPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEAD 217
SPN FTFK +LHICEQ GFADDA FF+LMT++YKI AS+EHY SII LL +G+ E+AD
Sbjct: 626 SPNAFTFKAILHICEQAGFADDACRFFSLMTKRYKIDASKEHYDSIISLLNSVGQFEKAD 685
Query: 216 KFIQLRSSL 190
KF+ LRS L
Sbjct: 686 KFVHLRSLL 694
>gb|EEF34347.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 208
Score = 94.7 bits (234), Expect = 2e-21
Identities = 45/69 (65%), Positives = 54/69 (78%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
F+P FTF VVL+IC+Q GFADDA F LM+R+YKIKASEEHY+ +I LLT GRI+EA
Sbjct: 138 FTPTHFTFTVVLNICDQAGFADDACRIFELMSRRYKIKASEEHYSVLIGLLTRAGRIQEA 197
Query: 219 DKFIQLRSS 193
KF Q+ SS
Sbjct: 198 KKFTQMSSS 206
>gb|OVA15719.1| Pentatricopeptide repeat [Macleaya cordata]
Length = 708
Score = 97.1 bits (240), Expect = 9e-21
Identities = 46/68 (67%), Positives = 56/68 (82%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
FSPN FTFKV+L IC++ G AD+A + F MT++YKIKASEEHY+SII LLT LGR EEA
Sbjct: 636 FSPNHFTFKVLLSICDRAGLADEAKNIFNSMTQRYKIKASEEHYSSIIGLLTRLGRSEEA 695
Query: 219 DKFIQLRS 196
++FI LRS
Sbjct: 696 ERFIHLRS 703
>gb|PON99747.1| Pentatricopeptide repeat [Trema orientalis]
Length = 684
Score = 95.9 bits (237), Expect = 2e-20
Identities = 46/71 (64%), Positives = 54/71 (76%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
F+PN FTF+VVL IC++ GF DDA F LMTRKY+IKASEEHY+ I LL GR EEA
Sbjct: 605 FTPNHFTFQVVLSICDEAGFVDDACRIFNLMTRKYEIKASEEHYSLISGLLARFGRTEEA 664
Query: 219 DKFIQLRSSLA 187
+FIQL SSL+
Sbjct: 665 QRFIQLSSSLS 675
>ref|XP_022718335.1| pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Durio zibethinus]
Length = 693
Score = 95.9 bits (237), Expect = 2e-20
Identities = 43/68 (63%), Positives = 55/68 (80%)
Frame = -3
Query: 399 FSPNQFTFKVVLHICEQGGFADDALSFFTLMTRKYKIKASEEHYTSIIDLLTHLGRIEEA 220
F+PN FTFKVVL IC+Q GF D+A F++MTRKYK+KASEEHY+ II+LL GR EEA
Sbjct: 623 FTPNHFTFKVVLSICKQAGFVDEACQIFSIMTRKYKLKASEEHYSIIIELLNTFGRFEEA 682
Query: 219 DKFIQLRS 196
++F+Q+ S
Sbjct: 683 ERFMQMSS 690