BLASTX nr result

ID: Rehmannia30_contig00029343 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00029343
         (669 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011090683.1| protein NETWORKED 1A-like [Sesamum indicum]        91   3e-17
gb|PIN17785.1| E3 ubiquitin ligase involved in syntaxin degradat...    79   4e-13
ref|XP_011073453.1| protein NETWORKED 1A-like [Sesamum indicum]        78   8e-13

>ref|XP_011090683.1| protein NETWORKED 1A-like [Sesamum indicum]
          Length = 1852

 Score = 90.9 bits (224), Expect = 3e-17
 Identities = 47/75 (62%), Positives = 58/75 (77%)
 Frame = -1

Query: 438  ILLEDQTLVSLQNLQMRIKAVGELMKDMSKHTMQRRSNS*KSKDEV*MDEIEQSKPVRCL 259
            +L EDQ+ VSLQNLQMRIKAVG+LM++M+K  + RRSNS  SK E    EIEQ K   CL
Sbjct: 1474 VLQEDQSFVSLQNLQMRIKAVGKLMEEMNKPLLHRRSNS-NSKQEPAKGEIEQLKSRLCL 1532

Query: 258  GRDKHEHNKKKGHVN 214
            GRDKH+H++KKG+ N
Sbjct: 1533 GRDKHDHSRKKGYAN 1547


>gb|PIN17785.1| E3 ubiquitin ligase involved in syntaxin degradation [Handroanthus
            impetiginosus]
          Length = 1738

 Score = 78.6 bits (192), Expect = 4e-13
 Identities = 48/99 (48%), Positives = 63/99 (63%)
 Frame = -1

Query: 510  EEHFYSKTK*FSASLQLSEAAGEGILLEDQTLVSLQNLQMRIKAVGELMKDMSKHTMQRR 331
            +E  +S+T     S   SE     IL ED +LVSL NLQ+R+KAVG+LM++M+K    RR
Sbjct: 1358 QEPEFSETAAADPSRSTSE-----ILQEDPSLVSLHNLQVRVKAVGKLMEEMNKPISHRR 1412

Query: 330  SNS*KSKDEV*MDEIEQSKPVRCLGRDKHEHNKKKGHVN 214
            S+S  SK E    EI+Q K  RC  RDK+EH++KKG  N
Sbjct: 1413 SSS-SSKQEPAAGEIQQPKTRRCFSRDKNEHSRKKGSKN 1450


>ref|XP_011073453.1| protein NETWORKED 1A-like [Sesamum indicum]
          Length = 1823

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 41/85 (48%), Positives = 66/85 (77%), Gaps = 3/85 (3%)
 Frame = -1

Query: 438  ILLEDQTLVSLQNLQMRIKAVGELMKDMSKHTMQRRSNS*KSKDEV*MDEIEQSKPVRCL 259
            ILLEDQ+L+SLQNL+MR++AVG+LM++M+K  + RRSNS  ++++V   E +Q KP R L
Sbjct: 1447 ILLEDQSLLSLQNLRMRVQAVGKLMEEMNKPVLPRRSNSNDTQEQV-TSENDQLKPRRSL 1505

Query: 258  GRDKHEHNKKKGH---VNNSTRAQQ 193
             RDKH++++ +G+   +N+S + Q+
Sbjct: 1506 HRDKHKYSRNEGYGNELNDSPKLQK 1530


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