BLASTX nr result

ID: Rehmannia30_contig00029140 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00029140
         (1010 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN12487.1| hypothetical protein CDL12_14913 [Handroanthus im...    69   1e-10
ref|XP_011074705.1| la-related protein 1B [Sesamum indicum]            65   5e-08
gb|PIN04104.1| RNA-binding protein LARP/SRO9 [Handroanthus impet...    60   3e-06
gb|KZV20124.1| la-related protein 1-like [Dorcoceras hygrometricum]    59   1e-05

>gb|PIN12487.1| hypothetical protein CDL12_14913 [Handroanthus impetiginosus]
          Length = 126

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = +1

Query: 886  LVYCLSFQVQQLTKDIPVILESLRYSTVVEVQGDRVRRRNE 1008
            ++ CL FQVQQLTKDIPVI+++LRYSTVVEVQGD+VRR NE
Sbjct: 1    MLSCLPFQVQQLTKDIPVIVDALRYSTVVEVQGDKVRRHNE 41


>ref|XP_011074705.1| la-related protein 1B [Sesamum indicum]
          Length = 530

 Score = 65.5 bits (158), Expect = 5e-08
 Identities = 32/34 (94%), Positives = 34/34 (100%)
 Frame = +1

Query: 907  QVQQLTKDIPVILESLRYSTVVEVQGDRVRRRNE 1008
            +VQQLTKDIPVILESLRYSTVVEVQGD+VRRRNE
Sbjct: 410  RVQQLTKDIPVILESLRYSTVVEVQGDKVRRRNE 443


>gb|PIN04104.1| RNA-binding protein LARP/SRO9 [Handroanthus impetiginosus]
          Length = 533

 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 28/34 (82%), Positives = 33/34 (97%)
 Frame = +1

Query: 907  QVQQLTKDIPVILESLRYSTVVEVQGDRVRRRNE 1008
            +VQQLTKDIPVI+++LRYSTVVEVQGD+VRR NE
Sbjct: 415  RVQQLTKDIPVIVDALRYSTVVEVQGDKVRRHNE 448


>gb|KZV20124.1| la-related protein 1-like [Dorcoceras hygrometricum]
          Length = 590

 Score = 58.5 bits (140), Expect = 1e-05
 Identities = 26/34 (76%), Positives = 34/34 (100%)
 Frame = +1

Query: 907  QVQQLTKDIPVILESLRYSTVVEVQGDRVRRRNE 1008
            +VQQLT+DIP+ILES+RYSTVVEVQGD++R+RN+
Sbjct: 402  RVQQLTQDIPLILESMRYSTVVEVQGDKMRKRND 435


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