BLASTX nr result
ID: Rehmannia30_contig00029068
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00029068
(457 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011073190.1| pentatricopeptide repeat-containing protein ... 109 7e-25
gb|KZV21767.1| pentatricopeptide repeat-containing protein mitoc... 108 1e-24
gb|EYU21818.1| hypothetical protein MIMGU_mgv1a0008301mg, partia... 92 7e-19
ref|XP_012856170.1| PREDICTED: pentatricopeptide repeat-containi... 92 7e-19
ref|XP_022884898.1| pentatricopeptide repeat-containing protein ... 92 8e-19
ref|XP_016479191.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-11
ref|XP_009628319.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-11
ref|XP_019243407.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-11
ref|XP_009802105.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-11
emb|CDP19762.1| unnamed protein product [Coffea canephora] 70 3e-11
gb|EPS65114.1| hypothetical protein M569_09664 [Genlisea aurea] 67 6e-10
ref|XP_019169899.1| PREDICTED: pentatricopeptide repeat-containi... 58 7e-07
gb|PHU24206.1| hypothetical protein BC332_09313 [Capsicum chinense] 58 9e-07
gb|KZM91229.1| hypothetical protein DCAR_021406 [Daucus carota s... 57 1e-06
ref|XP_017258264.1| PREDICTED: pentatricopeptide repeat-containi... 57 1e-06
gb|PHT49861.1| hypothetical protein CQW23_09608 [Capsicum baccatum] 57 1e-06
ref|XP_016563062.1| PREDICTED: pentatricopeptide repeat-containi... 57 1e-06
ref|XP_018824875.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
gb|OVA17376.1| Pentatricopeptide repeat [Macleaya cordata] 56 4e-06
>ref|XP_011073190.1| pentatricopeptide repeat-containing protein At5g61990,
mitochondrial [Sesamum indicum]
ref|XP_020548519.1| pentatricopeptide repeat-containing protein At5g61990,
mitochondrial [Sesamum indicum]
ref|XP_020548520.1| pentatricopeptide repeat-containing protein At5g61990,
mitochondrial [Sesamum indicum]
ref|XP_020548521.1| pentatricopeptide repeat-containing protein At5g61990,
mitochondrial [Sesamum indicum]
Length = 1035
Score = 109 bits (273), Expect = 7e-25
Identities = 55/89 (61%), Positives = 68/89 (76%), Gaps = 8/89 (8%)
Frame = +3
Query: 213 MVKLLSPKYCTLILX--------RLLCVSIKSRQYSHSPPKSEATAEEITKILKHNSWQY 368
MV++ SPK LI RLLC+S+KS+QYS SP ++EATA EI KILKHN+WQ+
Sbjct: 1 MVQVFSPKASILIRCQQGLIKKTRLLCISVKSQQYSRSPAENEATAAEIDKILKHNNWQF 60
Query: 369 LLESSHIPQGLNPNVVHSVLQKTQFSIHP 455
LLESSHIPQ LN +VVHSVLQ++ FS+HP
Sbjct: 61 LLESSHIPQRLNADVVHSVLQRSNFSVHP 89
>gb|KZV21767.1| pentatricopeptide repeat-containing protein mitochondrial-like
[Dorcoceras hygrometricum]
Length = 1488
Score = 108 bits (271), Expect = 1e-24
Identities = 56/90 (62%), Positives = 68/90 (75%), Gaps = 8/90 (8%)
Frame = +3
Query: 210 KMVKLLSPKYCTLILX--------RLLCVSIKSRQYSHSPPKSEATAEEITKILKHNSWQ 365
KMV L SP C + + RLLCV+IKSR+YSHSP + E TA EIT+ILKHN+WQ
Sbjct: 541 KMVPLFSPGGCNMGIYERQLIKKIRLLCVTIKSRRYSHSPGEIEVTAAEITRILKHNNWQ 600
Query: 366 YLLESSHIPQGLNPNVVHSVLQKTQFSIHP 455
+LLESSHIPQ LN +VV++VLQ+T FSIHP
Sbjct: 601 FLLESSHIPQRLNYDVVNTVLQRTHFSIHP 630
>gb|EYU21818.1| hypothetical protein MIMGU_mgv1a0008301mg, partial [Erythranthe
guttata]
Length = 828
Score = 92.4 bits (228), Expect = 7e-19
Identities = 51/84 (60%), Positives = 64/84 (76%), Gaps = 3/84 (3%)
Frame = +3
Query: 213 MVKLLSPKYCTLILX-RLLCVSIKSRQYSHSPPK-SEATAEEITKIL-KHNSWQYLLESS 383
MV+L SP+ T I RLL SIKS+QY H+PP +EATAEEI ++L KHN+WQ+LLESS
Sbjct: 1 MVQLFSPRIRTTIKKSRLLFASIKSQQYCHTPPPHTEATAEEIIRVLSKHNNWQFLLESS 60
Query: 384 HIPQGLNPNVVHSVLQKTQFSIHP 455
HIP L+ +VV SVLQ++ FS HP
Sbjct: 61 HIPTKLSSDVVQSVLQRSHFSTHP 84
>ref|XP_012856170.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial, partial [Erythranthe guttata]
Length = 835
Score = 92.4 bits (228), Expect = 7e-19
Identities = 51/84 (60%), Positives = 64/84 (76%), Gaps = 3/84 (3%)
Frame = +3
Query: 213 MVKLLSPKYCTLILX-RLLCVSIKSRQYSHSPPK-SEATAEEITKIL-KHNSWQYLLESS 383
MV+L SP+ T I RLL SIKS+QY H+PP +EATAEEI ++L KHN+WQ+LLESS
Sbjct: 1 MVQLFSPRIRTTIKKSRLLFASIKSQQYCHTPPPHTEATAEEIIRVLSKHNNWQFLLESS 60
Query: 384 HIPQGLNPNVVHSVLQKTQFSIHP 455
HIP L+ +VV SVLQ++ FS HP
Sbjct: 61 HIPTKLSSDVVQSVLQRSHFSTHP 84
>ref|XP_022884898.1| pentatricopeptide repeat-containing protein At5g61990,
mitochondrial [Olea europaea var. sylvestris]
ref|XP_022884899.1| pentatricopeptide repeat-containing protein At5g61990,
mitochondrial [Olea europaea var. sylvestris]
Length = 1027
Score = 92.4 bits (228), Expect = 8e-19
Identities = 51/89 (57%), Positives = 62/89 (69%), Gaps = 8/89 (8%)
Frame = +3
Query: 213 MVKLLSPKYCTLILX--------RLLCVSIKSRQYSHSPPKSEATAEEITKILKHNSWQY 368
M+ L S K CTL + R LCVS+KS Q S ++EAT EITKILKH++W+Y
Sbjct: 1 MIILFSNKACTLFIKQHRIINKTRHLCVSVKSDQISE---ENEATIAEITKILKHHNWKY 57
Query: 369 LLESSHIPQGLNPNVVHSVLQKTQFSIHP 455
LLESSHIPQ +N V+HSVLQ+T FSIHP
Sbjct: 58 LLESSHIPQRINNVVMHSVLQRTDFSIHP 86
>ref|XP_016479191.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Nicotiana tabacum]
ref|XP_016479192.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Nicotiana tabacum]
Length = 921
Score = 71.6 bits (174), Expect = 1e-11
Identities = 34/78 (43%), Positives = 56/78 (71%)
Frame = +3
Query: 222 LLSPKYCTLILXRLLCVSIKSRQYSHSPPKSEATAEEITKILKHNSWQYLLESSHIPQGL 401
LLS + + R + I+SR++++ P ++++TAEEI+ +LKH +W +LLESS IPQ L
Sbjct: 4 LLSKQAFVIKKARHVSFCIESRRFANIPGENKSTAEEISALLKHKNWNFLLESSGIPQKL 63
Query: 402 NPNVVHSVLQKTQFSIHP 455
+P+VVHSVL + + ++P
Sbjct: 64 SPDVVHSVLDRNKLVVNP 81
>ref|XP_009628319.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Nicotiana tomentosiformis]
ref|XP_009628320.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Nicotiana tomentosiformis]
Length = 921
Score = 71.6 bits (174), Expect = 1e-11
Identities = 34/78 (43%), Positives = 56/78 (71%)
Frame = +3
Query: 222 LLSPKYCTLILXRLLCVSIKSRQYSHSPPKSEATAEEITKILKHNSWQYLLESSHIPQGL 401
LLS + + R + I+SR++++ P ++++TAEEI+ +LKH +W +LLESS IPQ L
Sbjct: 4 LLSKQAFVIKKARHVSFCIESRRFANIPGENKSTAEEISALLKHKNWNFLLESSGIPQKL 63
Query: 402 NPNVVHSVLQKTQFSIHP 455
+P+VVHSVL + + ++P
Sbjct: 64 SPDVVHSVLDRNKLVVNP 81
>ref|XP_019243407.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Nicotiana attenuata]
ref|XP_019243408.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Nicotiana attenuata]
gb|OIT04662.1| pentatricopeptide repeat-containing protein, mitochondrial
[Nicotiana attenuata]
Length = 921
Score = 71.2 bits (173), Expect = 2e-11
Identities = 33/78 (42%), Positives = 55/78 (70%)
Frame = +3
Query: 222 LLSPKYCTLILXRLLCVSIKSRQYSHSPPKSEATAEEITKILKHNSWQYLLESSHIPQGL 401
LLS + + R + I++R++++ P + ++TAEEI+ +LKH +W +LLESS IPQ L
Sbjct: 4 LLSKQAIVIKKARHVSFCIEARRFANIPGEKKSTAEEISALLKHKNWNFLLESSEIPQKL 63
Query: 402 NPNVVHSVLQKTQFSIHP 455
+P+VVHSVL + + ++P
Sbjct: 64 SPDVVHSVLDRNKLVVNP 81
>ref|XP_009802105.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Nicotiana sylvestris]
ref|XP_016464841.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Nicotiana tabacum]
Length = 921
Score = 70.5 bits (171), Expect = 3e-11
Identities = 33/78 (42%), Positives = 54/78 (69%)
Frame = +3
Query: 222 LLSPKYCTLILXRLLCVSIKSRQYSHSPPKSEATAEEITKILKHNSWQYLLESSHIPQGL 401
LLS + + R + I+ R++++ P + ++TAEEI+ +LKH +W +LLESS IPQ L
Sbjct: 4 LLSKRTFVIKKARHVSFCIEPRRFANIPGEKKSTAEEISALLKHKNWNFLLESSEIPQKL 63
Query: 402 NPNVVHSVLQKTQFSIHP 455
+P+VVHSVL + + ++P
Sbjct: 64 SPDVVHSVLDRNKLVVNP 81
>emb|CDP19762.1| unnamed protein product [Coffea canephora]
Length = 1035
Score = 70.5 bits (171), Expect = 3e-11
Identities = 34/56 (60%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Frame = +3
Query: 291 YSHSPPKSEATAEEITKILKHNSWQYLLESSHIPQ-GLNPNVVHSVLQKTQFSIHP 455
+ H+ +E+TAEEI+KIL HN+WQ+LLESS +PQ LNP+VV SVLQ+ Q IHP
Sbjct: 35 FFHTSRGNESTAEEISKILMHNNWQFLLESSTVPQEKLNPDVVQSVLQRNQLDIHP 90
>gb|EPS65114.1| hypothetical protein M569_09664 [Genlisea aurea]
Length = 1012
Score = 67.0 bits (162), Expect = 6e-10
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Frame = +3
Query: 213 MVKLLSPKYCTLILXRL-----LCVSIKSRQYSHSPPKSEATAEEITKILKHNSWQYLLE 377
M +LLSP C + + +S+ R YS+ SEA EI KILKHN+W+++L+
Sbjct: 1 MARLLSPASCIFRQGMIGETGFMFISVSFRLYSNGVSVSEAA--EIGKILKHNNWEFMLD 58
Query: 378 SSHIPQGLNPNVVHSVLQKTQFSIHP 455
SS IP LN VV SVLQ T S+HP
Sbjct: 59 SSDIPLHLNSEVVDSVLQGTHSSVHP 84
>ref|XP_019169899.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Ipomoea nil]
ref|XP_019169900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Ipomoea nil]
ref|XP_019169901.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Ipomoea nil]
Length = 1031
Score = 58.2 bits (139), Expect = 7e-07
Identities = 28/63 (44%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Frame = +3
Query: 270 VSIKSRQ-YSHSPPKSEATAEEITKILKHNSWQYLLESSHIPQGLNPNVVHSVLQKTQFS 446
V+++SR+ + + ++E AE+I+KIL NSW+ LL+SS +P LNP+VV+SVL +++
Sbjct: 23 VTLRSRRRFLCTATENEVAAEDISKILGLNSWELLLDSSAVPSKLNPDVVYSVLHRSRSV 82
Query: 447 IHP 455
+HP
Sbjct: 83 VHP 85
>gb|PHU24206.1| hypothetical protein BC332_09313 [Capsicum chinense]
Length = 1023
Score = 57.8 bits (138), Expect = 9e-07
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +3
Query: 294 SHSPPKSEATAEEITKILKHNSWQYLLESSHIPQGLNPNVVHSVLQKTQFSIHP 455
S S +++TAEEI+ ILKH +W+ LL SS IPQ +NP+VV+SVL + + ++P
Sbjct: 30 SISGVSNKSTAEEISTILKHKNWKLLLGSSEIPQKINPDVVYSVLDRNKLVVNP 83
>gb|KZM91229.1| hypothetical protein DCAR_021406 [Daucus carota subsp. sativus]
Length = 846
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/49 (57%), Positives = 39/49 (79%)
Frame = +3
Query: 282 SRQYSHSPPKSEATAEEITKILKHNSWQYLLESSHIPQGLNPNVVHSVL 428
+R +SH+ +AT EITKILKHN+W++ LESS+IP+ LNP+V+ SVL
Sbjct: 20 TRFFSHN---EDATIGEITKILKHNNWKFYLESSNIPRKLNPDVIPSVL 65
>ref|XP_017258264.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial [Daucus carota subsp. sativus]
ref|XP_017258266.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial [Daucus carota subsp. sativus]
Length = 1015
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/49 (57%), Positives = 39/49 (79%)
Frame = +3
Query: 282 SRQYSHSPPKSEATAEEITKILKHNSWQYLLESSHIPQGLNPNVVHSVL 428
+R +SH+ +AT EITKILKHN+W++ LESS+IP+ LNP+V+ SVL
Sbjct: 22 TRFFSHN---EDATIGEITKILKHNNWKFYLESSNIPRKLNPDVIPSVL 67
>gb|PHT49861.1| hypothetical protein CQW23_09608 [Capsicum baccatum]
Length = 1023
Score = 57.4 bits (137), Expect = 1e-06
Identities = 25/48 (52%), Positives = 38/48 (79%)
Frame = +3
Query: 312 SEATAEEITKILKHNSWQYLLESSHIPQGLNPNVVHSVLQKTQFSIHP 455
+++TAEEI+ ILKH +W+ LL SS IPQ +NP+VV+SVL + + ++P
Sbjct: 36 NKSTAEEISTILKHKNWKLLLGSSEIPQKINPDVVYSVLDRNKLVVNP 83
>ref|XP_016563062.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial [Capsicum annuum]
gb|PHT88573.1| hypothetical protein T459_10679 [Capsicum annuum]
Length = 1023
Score = 57.4 bits (137), Expect = 1e-06
Identities = 25/48 (52%), Positives = 38/48 (79%)
Frame = +3
Query: 312 SEATAEEITKILKHNSWQYLLESSHIPQGLNPNVVHSVLQKTQFSIHP 455
+++TAEEI+ ILKH +W+ LL SS IPQ +NP+VV+SVL + + ++P
Sbjct: 36 NKSTAEEISTILKHKNWKMLLGSSEIPQKINPDVVYSVLDRNKLVVNP 83
>ref|XP_018824875.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial [Juglans regia]
Length = 940
Score = 56.6 bits (135), Expect = 2e-06
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Frame = +3
Query: 258 RLLCVSIKSRQY---SHSPPKSEATAEEITKILKHNSWQYLLESSHIPQGLNPNVVHSVL 428
RLL V KS + S E T EEI+ LK ++WQYL+ESS+IP+ LNP VV SVL
Sbjct: 27 RLLFVYAKSFSFCTSQTSKQNEELTIEEISAFLKQSNWQYLMESSNIPKKLNPEVVRSVL 86
Query: 429 Q 431
Q
Sbjct: 87 Q 87
>gb|OVA17376.1| Pentatricopeptide repeat [Macleaya cordata]
Length = 1041
Score = 55.8 bits (133), Expect = 4e-06
Identities = 26/61 (42%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Frame = +3
Query: 273 SIKSRQYSHSPPK---SEATAEEITKILKHNSWQYLLESSHIPQGLNPNVVHSVLQKTQF 443
S+K ++ S P +E +A EI+ +LKH++WQ+L++SS IP+ LNP ++ SVL + Q
Sbjct: 26 SLKFMEFYSSQPSIKGNEESAREISNLLKHDNWQFLMDSSDIPKKLNPEIIRSVLLQNQV 85
Query: 444 S 446
S
Sbjct: 86 S 86