BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00029032
         (1029 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus]            117   3e-25
ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus] >...   116   5e-25
gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]    115   1e-24
gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]    115   1e-24
dbj|BAS06276.1| polymerase polyprotein [Dahlia common mosaic virus]   115   2e-24
gb|AEA39176.1| polyprotein [Dahlia mosaic virus]                      115   2e-24
gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]                  114   4e-24
emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]         114   4e-24
gb|AMN10080.1| reverse transcriptase [Angelica bushy stunt virus]     114   4e-24
gb|ALF37644.1| putative reverse transcriptase [Strawberry vein b...   114   4e-24
gb|AQS27979.1| putative reverse transcriptase [Strawberry vein b...   114   5e-24
gb|AKB94071.1| ORF V protein [Strawberry vein banding virus]          113   6e-24
gb|ABW80581.1| polyprotein [Dahlia mosaic virus]                      113   7e-24
gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]            113   7e-24
gb|ARO77050.1| ORFV protein [Strawberry vein banding virus]           113   8e-24
ref|NP_043933.1| hypothetical protein [Strawberry vein banding v...   113   8e-24
gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]                      112   1e-23
gb|PRQ21805.1| putative nucleotidyltransferase, Ribonuclease H [...   106   2e-21
ref|NP_861410.1| putative multifunctional pol protein [Cestrum y...   105   2e-21
ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic prote...   105   2e-21

>gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus]
          Length = 814

 Score =  117 bits (293), Expect = 3e-25
 Identities = 59/149 (39%), Positives = 90/149 (60%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTPSEA 850
            K++K+     PKL +P++E+ L++ TDAS+D+W  VL   T ++E  CRY SG F  +E 
Sbjct: 667  KKIKKNLTSFPKLYLPKEEEFLIIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAEK 726

Query: 849  TRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARILRWQA 670
              +H NEKE  AV+    K+ ++L   KF ++ DN +   FLK KI    ++ R++RWQ 
Sbjct: 727  N-YHSNEKELLAVKNTISKFSIYLTPVKFLVRTDNRNFTYFLKTKISGDNKQGRLVRWQM 785

Query: 669  ECQYYDYDIVIIKSHENILADFLTRDGGN 583
                Y +DI  ++  +N+LAD LTRD  N
Sbjct: 786  WFSRYSFDIEHLEGSKNVLADCLTRDFQN 814


>ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus]
 gb|AAM53128.1| ORFV [Mirabilis mosaic virus]
          Length = 674

 Score =  116 bits (291), Expect = 5e-25
 Identities = 60/156 (38%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSE 853
            K++K+     PKL +P+ ED L++ TDASD +W  VL  + T  EE+ CRY SG F P+E
Sbjct: 518  KKIKKGLINFPKLYLPKKEDSLIIETDASDHFWGGVLKAQTTEGEELICRYSSGTFKPAE 577

Query: 852  ATRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSV-KAFLKNKIESKPEKARILRW 676
               +H NEKE  AV++   K+ ++L    FT++ DN ++ K F+  KI    ++ R++RW
Sbjct: 578  LN-YHSNEKELLAVKQVITKFSIYLTPVCFTVRTDNVNLLKGFMNKKITGDSKQGRLIRW 636

Query: 675  QAECQYYDYDIVIIKSHENILADFLTRDGGN*S*FH 568
            Q    +Y + +  +K  +N+LAD+LTR+  N +  H
Sbjct: 637  QMWFSHYTFKVDHLKGEQNVLADYLTREFHNGNVIH 672


>gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]
          Length = 673

 Score =  115 bits (288), Expect = 1e-24
 Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 2/148 (1%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSE 853
            K++K+     PKL +P+ ED L++ TDASD +W  VL  + T   E+ CRY SG F P+E
Sbjct: 520  KKIKKGLVNFPKLYLPKKEDSLIIETDASDHFWGGVLKAQTTEGNELICRYSSGTFKPAE 579

Query: 852  ATRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSV-KAFLKNKIESKPEKARILRW 676
               +H NEKE  AV++   K+ ++L    FT++ DN ++ K F+  KI    ++ R++RW
Sbjct: 580  LN-YHSNEKELLAVKQVITKFSIYLTPVTFTVRTDNVNLLKRFMNTKITGDSKQGRLIRW 638

Query: 675  QAECQYYDYDIVIIKSHENILADFLTRD 592
            Q    +Y +++  +K  +N+LAD+LTR+
Sbjct: 639  QMWLSHYTFNVNHLKGEKNVLADYLTRE 666


>gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]
          Length = 673

 Score =  115 bits (288), Expect = 1e-24
 Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 2/148 (1%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSE 853
            K++K+     PKL +P+ ED L++ TDASD +W  VL  + T   E+ CRY SG F P+E
Sbjct: 520  KKIKKGLVNFPKLYLPKKEDSLIIETDASDHFWGGVLKAQTTEGNELICRYSSGTFKPAE 579

Query: 852  ATRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSV-KAFLKNKIESKPEKARILRW 676
               +H NEKE  AV++   K+ ++L    FT++ DN ++ K F+  KI    ++ R++RW
Sbjct: 580  LN-YHSNEKELLAVKQVITKFSIYLTPVTFTVRTDNVNLLKRFMNTKITGDSKQGRLIRW 638

Query: 675  QAECQYYDYDIVIIKSHENILADFLTRD 592
            Q    +Y +++  +K  +N+LAD+LTR+
Sbjct: 639  QMWLSHYTFNVNHLKGEKNVLADYLTRE 666


>dbj|BAS06276.1| polymerase polyprotein [Dahlia common mosaic virus]
          Length = 672

 Score =  115 bits (287), Expect = 2e-24
 Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 2/148 (1%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSE 853
            K++K+     PKL +P+ ED L++ TDASD +W  VL  + T   E+ CRY SG F P+E
Sbjct: 519  KKIKKGLVNFPKLYLPKKEDSLIIETDASDHFWGGVLKAQTTEGNELICRYSSGTFKPAE 578

Query: 852  ATRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSV-KAFLKNKIESKPEKARILRW 676
               +H NEKE  AV++   K+ ++L    FT++ DN ++ K F+  KI    ++ R++RW
Sbjct: 579  LN-YHSNEKELLAVKQVITKFSIYLTPVTFTVRTDNVNLLKRFMNTKITGDSKQGRLVRW 637

Query: 675  QAECQYYDYDIVIIKSHENILADFLTRD 592
            Q    +Y +++  +K  +N+LAD+LTR+
Sbjct: 638  QMWLSHYTFNVNHLKGEKNVLADYLTRE 665


>gb|AEA39176.1| polyprotein [Dahlia mosaic virus]
          Length = 808

 Score =  115 bits (287), Expect = 2e-24
 Identities = 58/149 (38%), Positives = 90/149 (60%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTPSEA 850
            K++K+     PKL +P++++ L++ TDAS+D+W  VL   T ++E  CRY SG F  +E 
Sbjct: 661  KKIKKNLISFPKLYLPKEKEFLIIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAEK 720

Query: 849  TRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARILRWQA 670
              +H NEKE  AV+    K+ ++L   KF ++ DN +   FLK KI    ++ R++RWQ 
Sbjct: 721  N-YHSNEKELLAVKNTISKFSIYLTPVKFLVRTDNKNFTYFLKTKISGDNKQGRLVRWQM 779

Query: 669  ECQYYDYDIVIIKSHENILADFLTRDGGN 583
                Y +DI  ++  +N+LAD LTRD  N
Sbjct: 780  WFSRYSFDIEHLEGPKNVLADCLTRDFQN 808


>gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]
          Length = 810

 Score =  114 bits (285), Expect = 4e-24
 Identities = 57/146 (39%), Positives = 89/146 (60%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTPSEA 850
            K++K+     PKL +P++++ L++ TDAS+D+W  VL   T  +E  CRY SG F  +E 
Sbjct: 663  KKIKKNLTSFPKLYLPKEKEFLIIETDASNDYWGGVLKAKTAEKEEVCRYTSGSFKTAEK 722

Query: 849  TRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARILRWQA 670
              +H NEKE  AV+ A  K+ ++L   KF ++ D+ +   FLK KI    ++ R++RWQ 
Sbjct: 723  N-YHSNEKELLAVKNAISKFSIYLTPVKFLVRTDSKNFTYFLKTKISGDNKQGRLVRWQM 781

Query: 669  ECQYYDYDIVIIKSHENILADFLTRD 592
                Y +DI  ++  +N+LAD LTRD
Sbjct: 782  WFSRYTFDIEHLEGLKNVLADCLTRD 807


>emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]
          Length = 699

 Score =  114 bits (284), Expect = 4e-24
 Identities = 56/147 (38%), Positives = 90/147 (61%), Gaps = 1/147 (0%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSE 853
            +++K + K LP L  P  ED+ ++  DASDD W AVL  K+   +EV CRY SG F P+E
Sbjct: 549  RKIKSLVKSLPDLYNPSPEDKPIIECDASDDHWGAVLKAKLPEGKEVICRYASGTFKPAE 608

Query: 852  ATRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARILRWQ 673
               +H NEKE  ++ KA K +  ++L  KF ++ DN++   F++  I    +++R++RWQ
Sbjct: 609  KN-YHSNEKEILSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTNIAGDYKQSRLVRWQ 667

Query: 672  AECQYYDYDIVIIKSHENILADFLTRD 592
               + Y +DI  +   +N+LAD +TR+
Sbjct: 668  MALREYSFDIEHVSGQKNVLADIMTRE 694


>gb|AMN10080.1| reverse transcriptase [Angelica bushy stunt virus]
          Length = 703

 Score =  114 bits (284), Expect = 4e-24
 Identities = 56/146 (38%), Positives = 89/146 (60%), Gaps = 1/146 (0%)
 Frame = -1

Query: 1026 QLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPN-EEVPCRYCSGLFTPSEA 850
            +LK+     PKL  P  +D+L++ TDAS D+W  +L     N EE+ CRY SG F  +E 
Sbjct: 554  KLKKGLNNFPKLYHPLPDDKLIIETDASQDYWGGILKAANTNGEELICRYASGSFKSAE- 612

Query: 849  TRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARILRWQA 670
            TR+H NEKE+ AV +  KK+ ++L    FT++ DN +   F+  +I+   ++ R++RWQ 
Sbjct: 613  TRYHSNEKEYLAVIRVIKKFSIYLTPVHFTVRTDNKNFTHFMNLQIQGDNKQGRLVRWQQ 672

Query: 669  ECQYYDYDIVIIKSHENILADFLTRD 592
               +Y + +  I+  +N+ ADFLTR+
Sbjct: 673  WLSHYSFTVEHIEGSKNVFADFLTRE 698


>gb|ALF37644.1| putative reverse transcriptase [Strawberry vein banding virus]
          Length = 704

 Score =  114 bits (284), Expect = 4e-24
 Identities = 56/147 (38%), Positives = 90/147 (61%), Gaps = 1/147 (0%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSE 853
            +++K + K LP L  P  ED+ ++  DASDD W AVL  K+   +EV CRY SG F P+E
Sbjct: 554  RKIKSLVKSLPDLYNPSPEDKPIIECDASDDHWGAVLKAKLPEGKEVICRYASGTFKPAE 613

Query: 852  ATRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARILRWQ 673
               +H NEKE  ++ KA K +  ++L  KF ++ DN++   F++  I    +++R++RWQ
Sbjct: 614  KN-YHSNEKEILSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTNIAGDYKQSRLVRWQ 672

Query: 672  AECQYYDYDIVIIKSHENILADFLTRD 592
               + Y +DI  +   +N+LAD +TR+
Sbjct: 673  MALREYSFDIEHVSGQKNVLADIMTRE 699


>gb|AQS27979.1| putative reverse transcriptase [Strawberry vein banding virus]
          Length = 745

 Score =  114 bits (284), Expect = 5e-24
 Identities = 56/147 (38%), Positives = 90/147 (61%), Gaps = 1/147 (0%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSE 853
            +++K + K LP L  P  ED+ ++  DASDD W AVL  K+   +EV CRY SG F P+E
Sbjct: 595  RKIKSLVKSLPDLYNPSPEDKPIIECDASDDHWGAVLKVKLPEGKEVICRYASGTFKPAE 654

Query: 852  ATRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARILRWQ 673
               +H NEKE  ++ KA K +  ++L  KF ++ DN++   F++  I    +++R++RWQ
Sbjct: 655  KN-YHSNEKEILSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTNIAGDYKQSRLVRWQ 713

Query: 672  AECQYYDYDIVIIKSHENILADFLTRD 592
               + Y +DI  +   +N+LAD +TR+
Sbjct: 714  MALREYSFDIEHVSGQKNVLADIMTRE 740


>gb|AKB94071.1| ORF V protein [Strawberry vein banding virus]
          Length = 704

 Score =  113 bits (283), Expect = 6e-24
 Identities = 56/147 (38%), Positives = 89/147 (60%), Gaps = 1/147 (0%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSE 853
            +++K + K LP L  P  ED  ++  DASDD W AVL  K+   +EV CRY SG F P+E
Sbjct: 554  RKIKSLVKSLPDLYNPSPEDRPIIECDASDDHWGAVLKAKLPEGKEVICRYASGTFKPAE 613

Query: 852  ATRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARILRWQ 673
               +H NEKE  ++ KA K +  ++L  KF ++ DN++   F++  I    +++R++RWQ
Sbjct: 614  KN-YHSNEKEILSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTNIAGDYKQSRLVRWQ 672

Query: 672  AECQYYDYDIVIIKSHENILADFLTRD 592
               + Y +DI  +   +N+LAD +TR+
Sbjct: 673  MALREYSFDIEHVSGQKNVLADIMTRE 699


>gb|ABW80581.1| polyprotein [Dahlia mosaic virus]
          Length = 812

 Score =  113 bits (283), Expect = 7e-24
 Identities = 57/149 (38%), Positives = 89/149 (59%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTPSEA 850
            K++K+     PKL +P++++ L++ TDAS+D+W  VL   T ++E  CRY SG F  +E 
Sbjct: 665  KKIKKNLTSFPKLYLPKEKEFLIIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAER 724

Query: 849  TRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARILRWQA 670
              +H NEKE  AV+    K+ ++L   KF ++ DN +   FLK KI    ++ R++RWQ 
Sbjct: 725  N-YHSNEKELLAVKNTISKFSIYLTPVKFLVRTDNRNFTYFLKTKISGDNKQGRLVRWQM 783

Query: 669  ECQYYDYDIVIIKSHENILADFLTRDGGN 583
                Y +DI  ++  +N+LAD L RD  N
Sbjct: 784  WFSRYSFDIEHLEGSKNVLADCLPRDFQN 812


>gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]
          Length = 825

 Score =  113 bits (283), Expect = 7e-24
 Identities = 57/146 (39%), Positives = 86/146 (58%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTPSEA 850
            K++K+     PKL +P  ED L++ T AS+++W  VL   T   E  C+Y SG F  +E 
Sbjct: 674  KKIKKNLTSFPKLYLPNKEDFLIIETGASNEFWGGVLKVKTAETEEICKYTSGSFKTAEK 733

Query: 849  TRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARILRWQA 670
              +H NEKE  AV+    K+ ++L+  KF ++ DN +   FLK KI    ++ R++RWQ 
Sbjct: 734  N-YHSNEKELLAVKNTISKFSIYLIPVKFLVRTDNRNFTYFLKTKISGDNKQGRLVRWQM 792

Query: 669  ECQYYDYDIVIIKSHENILADFLTRD 592
                Y +DI  ++  +N+LADFLTRD
Sbjct: 793  WFSRYSFDIEHLEGPKNVLADFLTRD 818


>gb|ARO77050.1| ORFV protein [Strawberry vein banding virus]
          Length = 704

 Score =  113 bits (282), Expect = 8e-24
 Identities = 56/147 (38%), Positives = 89/147 (60%), Gaps = 1/147 (0%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSE 853
            +++K + K LP L  P  ED  ++  DASDD W AVL  K+   +EV CRY SG F P+E
Sbjct: 554  RKIKSLVKTLPDLYNPSPEDRPIIECDASDDHWGAVLKAKLPEGKEVICRYASGTFKPAE 613

Query: 852  ATRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARILRWQ 673
               +H NEKE  ++ KA K +  ++L  KF ++ DN++   F++  I    +++R++RWQ
Sbjct: 614  KN-YHSNEKEILSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTNIAGDYKQSRLVRWQ 672

Query: 672  AECQYYDYDIVIIKSHENILADFLTRD 592
               + Y +DI  +   +N+LAD +TR+
Sbjct: 673  MALREYSFDIEHVSGQKNVLADIMTRE 699


>ref|NP_043933.1| hypothetical protein [Strawberry vein banding virus]
 emb|CAA65970.1| ORF V [Strawberry vein banding virus]
          Length = 708

 Score =  113 bits (282), Expect = 8e-24
 Identities = 55/147 (37%), Positives = 90/147 (61%), Gaps = 1/147 (0%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSE 853
            +++K + K LP L  P  ED+ ++  DASDD W A+L  K+   +EV CRY SG F P+E
Sbjct: 558  RKIKSLVKTLPDLYNPSPEDKPIIECDASDDHWGAILKAKLPEGKEVICRYASGTFKPAE 617

Query: 852  ATRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARILRWQ 673
               +H NEKE  ++ KA K +  ++L  KF ++ DN++   F++  I    +++R++RWQ
Sbjct: 618  KN-YHSNEKEILSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTNIAGDYKQSRLVRWQ 676

Query: 672  AECQYYDYDIVIIKSHENILADFLTRD 592
               + Y +DI  +   +N+LAD +TR+
Sbjct: 677  MALREYSFDIEHVSGQKNVLADIMTRE 703


>gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]
          Length = 806

 Score =  112 bits (281), Expect = 1e-23
 Identities = 56/149 (37%), Positives = 89/149 (59%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTPSEA 850
            K++K+     PKL +P++++  ++ TDAS+D+W  VL   T ++E  CRY SG F  +E 
Sbjct: 659  KKIKKNLTSFPKLYLPKEKEFPIIETDASNDFWGGVLKAKTADKEAVCRYTSGSFKTAEK 718

Query: 849  TRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARILRWQA 670
              +H NEK+  AV+    K+ ++L   KF ++ DN +   FLK KI    ++ R++RWQ 
Sbjct: 719  N-YHSNEKKLLAVKNTISKFSIYLTPVKFLVRTDNRNFTYFLKTKISGDNKQGRLIRWQM 777

Query: 669  ECQYYDYDIVIIKSHENILADFLTRDGGN 583
                Y +DI  ++  +N+LAD LTRD  N
Sbjct: 778  WFSRYSFDIEHLEGSKNVLADCLTRDFQN 806


>gb|PRQ21805.1| putative nucleotidyltransferase, Ribonuclease H [Rosa chinensis]
          Length = 720

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 2/148 (1%)
 Frame = -1

Query: 1029 KQLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTP--NEEVPCRYCSGLFTPS 856
            KQ+K +CK L  L  P++ DE++L TDASD++W+ V+    P  N E  C++CSG F+P+
Sbjct: 139  KQIKNLCKNLHPLQQPEENDEIILQTDASDNYWSGVVLAKAPGTNIEKICKFCSGKFSPA 198

Query: 855  EATRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARILRW 676
            +   +   EKE  AV+K      L  L K FT++ D + VK F   K++   ++ R+  W
Sbjct: 199  KLN-YPTGEKEILAVKKTILN-SLAFLGKPFTVRTDCARVKNFKIFKLDKAADRGRLANW 256

Query: 675  QAECQYYDYDIVIIKSHENILADFLTRD 592
            Q     YDY++ +I  ++N L D LTR+
Sbjct: 257  QLFLNQYDYNVELIAGNKNYLPDALTRE 284


>ref|NP_861410.1| putative multifunctional pol protein [Cestrum yellow leaf curling
            virus]
 sp|Q7TD08.1|POL_CYLCV RecName: Full=Enzymatic polyprotein; Includes: RecName: Full=Aspartic
            protease; Includes: RecName: Full=Endonuclease; Includes:
            RecName: Full=Reverse transcriptase
 gb|AAP78924.1| putative multifunctional pol protein [Cestrum yellow leaf curling
            virus]
          Length = 643

 Score =  105 bits (263), Expect = 2e-21
 Identities = 60/154 (38%), Positives = 89/154 (57%), Gaps = 9/154 (5%)
 Frame = -1

Query: 1026 QLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVLT-------KVTPNEEVP--CRYCS 874
            Q+K+ CK L  L  P+ ED L++ TDAS D WA  L        K T N+ V   C+Y S
Sbjct: 487  QIKKKCKDLSPLYFPKPEDYLIIETDASGDTWAGCLKAAELLFPKGTKNKVVERLCKYTS 546

Query: 873  GLFTPSEATRWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEK 694
            G+F+ +E  ++ ++EKE  A  K  +KW   LL K+FTL+ D+S V  F ++ +++   +
Sbjct: 547  GIFSSAEQ-KYTVHEKETLAALKTMRKWKAELLPKEFTLRTDSSYVTGFARHNLKANYNQ 605

Query: 693  ARILRWQAECQYYDYDIVIIKSHENILADFLTRD 592
             R++RWQ E   Y   +  IK  +N LAD LTR+
Sbjct: 606  GRLVRWQLEFLQYPARVEYIKGEKNSLADTLTRE 639


>ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
            Reverse transcriptase] [Carnation etched ring virus]
 sp|P05400.1|POL_CERV RecName: Full=Enzymatic polyprotein; Includes: RecName: Full=Aspartic
            protease; Includes: RecName: Full=Endonuclease; Includes:
            RecName: Full=Reverse transcriptase
 emb|CAA28360.1| unnamed protein product [Carnation etched ring virus]
 prf||1301227E ORF 5
          Length = 659

 Score =  105 bits (263), Expect = 2e-21
 Identities = 50/142 (35%), Positives = 83/142 (58%)
 Frame = -1

Query: 1026 QLKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTPSEAT 847
            ++K+  K  PKL  P+  D+LV+ TDAS+++W  +L  +  + E  CRY SG F  +E  
Sbjct: 510  KIKKNLKSFPKLYHPEPNDKLVIETDASEEFWGGILKAIHNSHEYICRYASGSFKAAERN 569

Query: 846  RWHINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARILRWQAE 667
             +H NEKE  AV +  KK+ ++L   +F ++ DN +   F+   ++   ++ R++RWQ  
Sbjct: 570  -YHSNEKELLAVIRVIKKFSIYLTPSRFLIRTDNKNFTHFVNINLKGDRKQGRLVRWQMW 628

Query: 666  CQYYDYDIVIIKSHENILADFL 601
               YD+D+  I   +N+ ADFL
Sbjct: 629  LSQYDFDVEHIAGTKNVFADFL 650