BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00028178
         (691 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011085577.1| DNA-directed RNA polymerase 2, chloroplastic...   375   e-120
ref|XP_012835044.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   361   e-115
ref|XP_022844750.1| DNA-directed RNA polymerase 2B, chloroplasti...   340   e-107
ref|XP_022844749.1| DNA-directed RNA polymerase 2B, chloroplasti...   340   e-107
gb|KZV25000.1| DNA-directed RNA polymerase 2, chloroplastic/mito...   339   e-106
ref|XP_022884192.1| DNA-directed RNA polymerase 2B, chloroplasti...   338   e-106
ref|XP_022844755.1| DNA-directed RNA polymerase 2B, chloroplasti...   334   e-106
ref|XP_022844754.1| DNA-directed RNA polymerase 2, chloroplastic...   334   e-105
ref|XP_022844752.1| DNA-directed RNA polymerase 2B, chloroplasti...   334   e-105
ref|XP_022844751.1| DNA-directed RNA polymerase 2, chloroplastic...   334   e-105
ref|XP_022844748.1| DNA-directed RNA polymerase 2B, chloroplasti...   334   e-104
ref|XP_022844747.1| DNA-directed RNA polymerase 2B, chloroplasti...   334   e-104
ref|XP_016445194.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   326   e-101
ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic...   326   e-101
ref|XP_019234815.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   325   e-101
gb|KDP24319.1| hypothetical protein JCGZ_25615 [Jatropha curcas]      323   e-101
ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   325   e-101
ref|NP_001311818.1| DNA-directed RNA polymerase 2B, chloroplasti...   325   e-101
gb|KJB42980.1| hypothetical protein B456_007G178100 [Gossypium r...   318   e-101
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...   323   e-100

>ref|XP_011085577.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Sesamum
           indicum]
          Length = 1032

 Score =  375 bits (964), Expect = e-120
 Identities = 188/230 (81%), Positives = 197/230 (85%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           EFIRKGKSKAAYAKYFD LPADMMAVITMHKLM LLM GGEHG ARVVQAAC+IGDAIEQ
Sbjct: 253 EFIRKGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMTGGEHGCARVVQAACIIGDAIEQ 312

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQ 360
           EVRI YFL                   DGN QEQEKL QRVT L+KKQKL+AVRQ+VN+Q
Sbjct: 313 EVRIQYFLEKTKKKKVQKNTEKEGEEFDGNNQEQEKLHQRVTMLIKKQKLQAVRQLVNRQ 372

Query: 361 IEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTS 540
           IEYQPWGQDAKAKVGS LIELILQTAYIQPPANQ  +GPPDIRPAFVHT RTVTK+ KTS
Sbjct: 373 IEYQPWGQDAKAKVGSHLIELILQTAYIQPPANQSTEGPPDIRPAFVHTMRTVTKETKTS 432

Query: 541 SRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLP 690
           S+RYGVIQCD LVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAY+YLP
Sbjct: 433 SKRYGVIQCDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYLYLP 482


>ref|XP_012835044.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial [Erythranthe guttata]
 gb|EYU39350.1| hypothetical protein MIMGU_mgv1a000681mg [Erythranthe guttata]
          Length = 1021

 Score =  361 bits (927), Expect = e-115
 Identities = 183/230 (79%), Positives = 197/230 (85%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           EFIRKGKSKA+YA YFD LPADMMAVITMHKLMALLM G EHG ARVV AACVIGDAIEQ
Sbjct: 243 EFIRKGKSKASYANYFDLLPADMMAVITMHKLMALLMTG-EHGCARVVAAACVIGDAIEQ 301

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQ 360
           EVRIHYFL                   D NIQEQ KLR++VT LMKKQKLRAVRQIVN+Q
Sbjct: 302 EVRIHYFLEKTKKKKVTKDAETEGDKPDENIQEQAKLREKVTNLMKKQKLRAVRQIVNRQ 361

Query: 361 IEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTS 540
           IE Q WGQDAKAKVGSRLIELI+QTAYIQPPA+Q A+GPPDI+PAF+HTF+TV K+IK++
Sbjct: 362 IESQAWGQDAKAKVGSRLIELIIQTAYIQPPASQSAEGPPDIKPAFLHTFKTVAKEIKSN 421

Query: 541 SRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLP 690
           SRRYGVIQCD LVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAY+YLP
Sbjct: 422 SRRYGVIQCDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYLYLP 471


>ref|XP_022844750.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           isoform X4 [Olea europaea var. sylvestris]
          Length = 1036

 Score =  340 bits (873), Expect = e-107
 Identities = 173/230 (75%), Positives = 186/230 (80%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           EFIRKGKSKAAY KYFDHLPADMMA+ITMHKLM LLM GGEHG ARVVQAAC+IGDAIEQ
Sbjct: 258 EFIRKGKSKAAYGKYFDHLPADMMAIITMHKLMGLLMTGGEHGCARVVQAACMIGDAIEQ 317

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQ 360
           EVRIH FL                  SDGN QEQEKLR+ V  LMKKQKLRAVRQ+V  Q
Sbjct: 318 EVRIHKFLKKTETNKVRETKKEGGG-SDGNDQEQEKLRKAVNNLMKKQKLRAVRQLVKGQ 376

Query: 361 IEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTS 540
            + +PWG DAKAKVGSRLIEL+LQTAYIQPP +QLAD PPDIRPAF+HT  TV K+ K  
Sbjct: 377 DDSKPWGTDAKAKVGSRLIELLLQTAYIQPPVDQLADSPPDIRPAFIHTCITVRKETKNF 436

Query: 541 SRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLP 690
           SRRYGVIQCD LV KGLERTARH VIPYMPMLVPPVKWT YD+GA++YLP
Sbjct: 437 SRRYGVIQCDPLVTKGLERTARHTVIPYMPMLVPPVKWTSYDRGAHLYLP 486


>ref|XP_022844749.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           isoform X3 [Olea europaea var. sylvestris]
          Length = 1047

 Score =  340 bits (873), Expect = e-107
 Identities = 173/230 (75%), Positives = 186/230 (80%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           EFIRKGKSKAAY KYFDHLPADMMA+ITMHKLM LLM GGEHG ARVVQAAC+IGDAIEQ
Sbjct: 258 EFIRKGKSKAAYGKYFDHLPADMMAIITMHKLMGLLMTGGEHGCARVVQAACMIGDAIEQ 317

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQ 360
           EVRIH FL                  SDGN QEQEKLR+ V  LMKKQKLRAVRQ+V  Q
Sbjct: 318 EVRIHKFLKKTETNKVRETKKEGGG-SDGNDQEQEKLRKAVNNLMKKQKLRAVRQLVKGQ 376

Query: 361 IEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTS 540
            + +PWG DAKAKVGSRLIEL+LQTAYIQPP +QLAD PPDIRPAF+HT  TV K+ K  
Sbjct: 377 DDSKPWGTDAKAKVGSRLIELLLQTAYIQPPVDQLADSPPDIRPAFIHTCITVRKETKNF 436

Query: 541 SRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLP 690
           SRRYGVIQCD LV KGLERTARH VIPYMPMLVPPVKWT YD+GA++YLP
Sbjct: 437 SRRYGVIQCDPLVTKGLERTARHTVIPYMPMLVPPVKWTSYDRGAHLYLP 486


>gb|KZV25000.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
           [Dorcoceras hygrometricum]
          Length = 1029

 Score =  339 bits (869), Expect = e-106
 Identities = 168/230 (73%), Positives = 185/230 (80%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           EFIR+GK +  YA YFDHLPADMMAVITMHKL+ LLM GGEHG ARVV AAC+IGDAIE 
Sbjct: 250 EFIRRGKCRTGYAPYFDHLPADMMAVITMHKLVGLLMTGGEHGGARVVHAACIIGDAIEH 309

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQ 360
           EVRIH  L                  S+ N QEQEKLR++VT L+KKQKLRAVRQ+V+ Q
Sbjct: 310 EVRIHRILESRKKKKVENDIEDEGDGSNDNPQEQEKLRKKVTNLIKKQKLRAVRQLVSSQ 369

Query: 361 IEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTS 540
            E +PWGQDAKAKVGSRLIELILQTAYIQ PANQLADGPPD+RPAF HT RTV  + KT+
Sbjct: 370 HEGKPWGQDAKAKVGSRLIELILQTAYIQSPANQLADGPPDVRPAFTHTCRTVASETKTA 429

Query: 541 SRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLP 690
           SRRYGVIQCD LVRKGLERTA HM+IPYMPMLV P+KWTGYD GAY+YLP
Sbjct: 430 SRRYGVIQCDPLVRKGLERTASHMIIPYMPMLVHPIKWTGYDNGAYLYLP 479


>ref|XP_022884192.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           isoform X1 [Olea europaea var. sylvestris]
          Length = 1036

 Score =  338 bits (867), Expect = e-106
 Identities = 170/230 (73%), Positives = 187/230 (81%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           E IRKGKSKA YAKYFDHLPADMM++ITMHKLM LLM GGEHG ARVVQAAC+IGDAIEQ
Sbjct: 258 ELIRKGKSKAGYAKYFDHLPADMMSIITMHKLMGLLMTGGEHGCARVVQAACMIGDAIEQ 317

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQ 360
           EVRIH FL                  SDGN Q+QEKLR+ V  LMKKQKL+AVRQ+V  Q
Sbjct: 318 EVRIHKFLMKTQRQKVKKTKQEDSG-SDGNTQKQEKLRKTVNNLMKKQKLQAVRQLVKGQ 376

Query: 361 IEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTS 540
            + +PWG DAKAKVGSRLIEL+LQTAYIQPP +QLAD PPDIRPAF+HT  TV K+ K  
Sbjct: 377 DDSKPWGTDAKAKVGSRLIELLLQTAYIQPPVDQLADSPPDIRPAFIHTCITVRKETKNF 436

Query: 541 SRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLP 690
           SRRYGVIQCD L+ KGLERTARHMVIPYMPMLVPPVKWTGYD+GA++YLP
Sbjct: 437 SRRYGVIQCDPLIIKGLERTARHMVIPYMPMLVPPVKWTGYDRGAHLYLP 486


>ref|XP_022844755.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           isoform X8 [Olea europaea var. sylvestris]
          Length = 888

 Score =  334 bits (857), Expect = e-106
 Identities = 174/242 (71%), Positives = 188/242 (77%), Gaps = 12/242 (4%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           EFIRKGKSKAAY KYFDHLPADMMA+ITMHKLM LLM GGEHG ARVVQAAC+IGDAIEQ
Sbjct: 87  EFIRKGKSKAAYGKYFDHLPADMMAIITMHKLMGLLMTGGEHGCARVVQAACMIGDAIEQ 146

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQ 360
           EVRIH FL                  SDGN QEQEKLR+ V  LMKKQKLRAVRQ+V  Q
Sbjct: 147 EVRIHKFLKKTETNKVRETKKEGGG-SDGNDQEQEKLRKAVNNLMKKQKLRAVRQLVKGQ 205

Query: 361 IEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTS 540
            + +PWG DAKAKVGSRLIEL+LQTAYIQPP +QLAD PPDIRPAF+HT  TV K+ K+S
Sbjct: 206 DDSKPWGTDAKAKVGSRLIELLLQTAYIQPPVDQLADSPPDIRPAFIHTCITVRKETKSS 265

Query: 541 ------------SRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIY 684
                       SRRYGVIQCD LV KGLERTARH VIPYMPMLVPPVKWT YD+GA++Y
Sbjct: 266 TVLISFSLCRNFSRRYGVIQCDPLVTKGLERTARHTVIPYMPMLVPPVKWTSYDRGAHLY 325

Query: 685 LP 690
           LP
Sbjct: 326 LP 327


>ref|XP_022844754.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like
           isoform X7 [Olea europaea var. sylvestris]
          Length = 980

 Score =  334 bits (857), Expect = e-105
 Identities = 174/242 (71%), Positives = 188/242 (77%), Gaps = 12/242 (4%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           EFIRKGKSKAAY KYFDHLPADMMA+ITMHKLM LLM GGEHG ARVVQAAC+IGDAIEQ
Sbjct: 179 EFIRKGKSKAAYGKYFDHLPADMMAIITMHKLMGLLMTGGEHGCARVVQAACMIGDAIEQ 238

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQ 360
           EVRIH FL                  SDGN QEQEKLR+ V  LMKKQKLRAVRQ+V  Q
Sbjct: 239 EVRIHKFLKKTETNKVRETKKEGGG-SDGNDQEQEKLRKAVNNLMKKQKLRAVRQLVKGQ 297

Query: 361 IEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTS 540
            + +PWG DAKAKVGSRLIEL+LQTAYIQPP +QLAD PPDIRPAF+HT  TV K+ K+S
Sbjct: 298 DDSKPWGTDAKAKVGSRLIELLLQTAYIQPPVDQLADSPPDIRPAFIHTCITVRKETKSS 357

Query: 541 ------------SRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIY 684
                       SRRYGVIQCD LV KGLERTARH VIPYMPMLVPPVKWT YD+GA++Y
Sbjct: 358 TVLISFSLCRNFSRRYGVIQCDPLVTKGLERTARHTVIPYMPMLVPPVKWTSYDRGAHLY 417

Query: 685 LP 690
           LP
Sbjct: 418 LP 419


>ref|XP_022844752.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           isoform X6 [Olea europaea var. sylvestris]
          Length = 993

 Score =  334 bits (857), Expect = e-105
 Identities = 174/242 (71%), Positives = 188/242 (77%), Gaps = 12/242 (4%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           EFIRKGKSKAAY KYFDHLPADMMA+ITMHKLM LLM GGEHG ARVVQAAC+IGDAIEQ
Sbjct: 258 EFIRKGKSKAAYGKYFDHLPADMMAIITMHKLMGLLMTGGEHGCARVVQAACMIGDAIEQ 317

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQ 360
           EVRIH FL                  SDGN QEQEKLR+ V  LMKKQKLRAVRQ+V  Q
Sbjct: 318 EVRIHKFLKKTETNKVRETKKEGGG-SDGNDQEQEKLRKAVNNLMKKQKLRAVRQLVKGQ 376

Query: 361 IEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTS 540
            + +PWG DAKAKVGSRLIEL+LQTAYIQPP +QLAD PPDIRPAF+HT  TV K+ K+S
Sbjct: 377 DDSKPWGTDAKAKVGSRLIELLLQTAYIQPPVDQLADSPPDIRPAFIHTCITVRKETKSS 436

Query: 541 ------------SRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIY 684
                       SRRYGVIQCD LV KGLERTARH VIPYMPMLVPPVKWT YD+GA++Y
Sbjct: 437 TVLISFSLCRNFSRRYGVIQCDPLVTKGLERTARHTVIPYMPMLVPPVKWTSYDRGAHLY 496

Query: 685 LP 690
           LP
Sbjct: 497 LP 498


>ref|XP_022844751.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like
           isoform X5 [Olea europaea var. sylvestris]
          Length = 1029

 Score =  334 bits (857), Expect = e-105
 Identities = 174/242 (71%), Positives = 188/242 (77%), Gaps = 12/242 (4%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           EFIRKGKSKAAY KYFDHLPADMMA+ITMHKLM LLM GGEHG ARVVQAAC+IGDAIEQ
Sbjct: 228 EFIRKGKSKAAYGKYFDHLPADMMAIITMHKLMGLLMTGGEHGCARVVQAACMIGDAIEQ 287

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQ 360
           EVRIH FL                  SDGN QEQEKLR+ V  LMKKQKLRAVRQ+V  Q
Sbjct: 288 EVRIHKFLKKTETNKVRETKKEGGG-SDGNDQEQEKLRKAVNNLMKKQKLRAVRQLVKGQ 346

Query: 361 IEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTS 540
            + +PWG DAKAKVGSRLIEL+LQTAYIQPP +QLAD PPDIRPAF+HT  TV K+ K+S
Sbjct: 347 DDSKPWGTDAKAKVGSRLIELLLQTAYIQPPVDQLADSPPDIRPAFIHTCITVRKETKSS 406

Query: 541 ------------SRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIY 684
                       SRRYGVIQCD LV KGLERTARH VIPYMPMLVPPVKWT YD+GA++Y
Sbjct: 407 TVLISFSLCRNFSRRYGVIQCDPLVTKGLERTARHTVIPYMPMLVPPVKWTSYDRGAHLY 466

Query: 685 LP 690
           LP
Sbjct: 467 LP 468


>ref|XP_022844748.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           isoform X2 [Olea europaea var. sylvestris]
          Length = 1048

 Score =  334 bits (857), Expect = e-104
 Identities = 174/242 (71%), Positives = 188/242 (77%), Gaps = 12/242 (4%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           EFIRKGKSKAAY KYFDHLPADMMA+ITMHKLM LLM GGEHG ARVVQAAC+IGDAIEQ
Sbjct: 258 EFIRKGKSKAAYGKYFDHLPADMMAIITMHKLMGLLMTGGEHGCARVVQAACMIGDAIEQ 317

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQ 360
           EVRIH FL                  SDGN QEQEKLR+ V  LMKKQKLRAVRQ+V  Q
Sbjct: 318 EVRIHKFLKKTETNKVRETKKEGGG-SDGNDQEQEKLRKAVNNLMKKQKLRAVRQLVKGQ 376

Query: 361 IEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTS 540
            + +PWG DAKAKVGSRLIEL+LQTAYIQPP +QLAD PPDIRPAF+HT  TV K+ K+S
Sbjct: 377 DDSKPWGTDAKAKVGSRLIELLLQTAYIQPPVDQLADSPPDIRPAFIHTCITVRKETKSS 436

Query: 541 ------------SRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIY 684
                       SRRYGVIQCD LV KGLERTARH VIPYMPMLVPPVKWT YD+GA++Y
Sbjct: 437 TVLISFSLCRNFSRRYGVIQCDPLVTKGLERTARHTVIPYMPMLVPPVKWTSYDRGAHLY 496

Query: 685 LP 690
           LP
Sbjct: 497 LP 498


>ref|XP_022844747.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           isoform X1 [Olea europaea var. sylvestris]
          Length = 1059

 Score =  334 bits (857), Expect = e-104
 Identities = 174/242 (71%), Positives = 188/242 (77%), Gaps = 12/242 (4%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           EFIRKGKSKAAY KYFDHLPADMMA+ITMHKLM LLM GGEHG ARVVQAAC+IGDAIEQ
Sbjct: 258 EFIRKGKSKAAYGKYFDHLPADMMAIITMHKLMGLLMTGGEHGCARVVQAACMIGDAIEQ 317

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQ 360
           EVRIH FL                  SDGN QEQEKLR+ V  LMKKQKLRAVRQ+V  Q
Sbjct: 318 EVRIHKFLKKTETNKVRETKKEGGG-SDGNDQEQEKLRKAVNNLMKKQKLRAVRQLVKGQ 376

Query: 361 IEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTS 540
            + +PWG DAKAKVGSRLIEL+LQTAYIQPP +QLAD PPDIRPAF+HT  TV K+ K+S
Sbjct: 377 DDSKPWGTDAKAKVGSRLIELLLQTAYIQPPVDQLADSPPDIRPAFIHTCITVRKETKSS 436

Query: 541 ------------SRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIY 684
                       SRRYGVIQCD LV KGLERTARH VIPYMPMLVPPVKWT YD+GA++Y
Sbjct: 437 TVLISFSLCRNFSRRYGVIQCDPLVTKGLERTARHTVIPYMPMLVPPVKWTSYDRGAHLY 496

Query: 685 LP 690
           LP
Sbjct: 497 LP 498


>ref|XP_016445194.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Nicotiana tabacum]
          Length = 1020

 Score =  326 bits (835), Expect = e-101
 Identities = 169/232 (72%), Positives = 186/232 (80%), Gaps = 2/232 (0%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           E   +GKSKAAYAKYF  LPADMMAVITMHKLM LLM GG+HG ARVVQAA VIGDAIEQ
Sbjct: 243 ELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQ 302

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKLRQRVTTLMKKQKLRAVRQIVN 354
           EVRIH FL                   DG    QEQEKLR++VT LMKKQKLRAV QIV 
Sbjct: 303 EVRIHNFLEKTKKQKAEKDKQK----EDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVR 358

Query: 355 KQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIK 534
           +Q + +PWGQDA+AKVGSRLI+L+LQTAYIQPPANQLA  PPDIRPAFVH+ RTV K+ K
Sbjct: 359 RQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAKETK 418

Query: 535 TSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLP 690
           ++SRRYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWTGYDKG ++YLP
Sbjct: 419 SASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLP 470


>ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
           [Nicotiana sylvestris]
 sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
           AltName: Full=T7 bacteriophage-type single subunit RNA
           polymerase 2; Flags: Precursor
 emb|CAC82575.2| phage-type RNA polymerase [Nicotiana sylvestris]
          Length = 1020

 Score =  326 bits (835), Expect = e-101
 Identities = 169/232 (72%), Positives = 186/232 (80%), Gaps = 2/232 (0%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           E   +GKSKAAYAKYF  LPADMMAVITMHKLM LLM GG+HG ARVVQAA VIGDAIEQ
Sbjct: 243 ELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQ 302

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKLRQRVTTLMKKQKLRAVRQIVN 354
           EVRIH FL                   DG    QEQEKLR++VT LMKKQKLRAV QIV 
Sbjct: 303 EVRIHNFLEKTKKQKAEKDKQK----EDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVR 358

Query: 355 KQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIK 534
           +Q + +PWGQDA+AKVGSRLI+L+LQTAYIQPPANQLA  PPDIRPAFVH+ RTV K+ K
Sbjct: 359 RQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAKETK 418

Query: 535 TSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLP 690
           ++SRRYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWTGYDKG ++YLP
Sbjct: 419 SASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLP 470


>ref|XP_019234815.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial [Nicotiana attenuata]
 gb|OIT26485.1| dna-directed rna polymerase 2b, chloroplasticmitochondrial
           [Nicotiana attenuata]
          Length = 1024

 Score =  325 bits (834), Expect = e-101
 Identities = 169/232 (72%), Positives = 185/232 (79%), Gaps = 2/232 (0%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           E   +GKSKA YAKYF  LPADMMAVITMHKLM LLM GG+HG ARVVQAA VIGDAIEQ
Sbjct: 247 ELCSQGKSKAGYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQ 306

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKLRQRVTTLMKKQKLRAVRQIVN 354
           EVRIH FL                   DG    QEQEKLR++VT LMKKQKLRAV QIV 
Sbjct: 307 EVRIHNFLEKTKKQKAEKDRQK----EDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVR 362

Query: 355 KQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIK 534
           +Q + +PWGQDAKAKVGSRLIEL+LQTAYIQPPANQLA  PPDIRPAF+H+ RTV K+ K
Sbjct: 363 RQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETK 422

Query: 535 TSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLP 690
           ++SRRYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWTGYDKG ++YLP
Sbjct: 423 SASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLP 474


>gb|KDP24319.1| hypothetical protein JCGZ_25615 [Jatropha curcas]
          Length = 908

 Score =  323 bits (827), Expect = e-101
 Identities = 161/230 (70%), Positives = 186/230 (80%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           E IR+GK +AAYA YFD LPADMMAVITMHKLMAL+M GGEHG ARVV AA  +GDAI+Q
Sbjct: 129 ELIREGKCRAAYAPYFDQLPADMMAVITMHKLMALVMTGGEHGCARVVAAALTVGDAIDQ 188

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQ 360
           EVRIH FL                  S+  ++EQEKLR++VT L++KQKL AVRQIV  Q
Sbjct: 189 EVRIHKFLEKTKKKKTRNSEKNQEEESNDMVKEQEKLRKKVTDLIRKQKLPAVRQIVKGQ 248

Query: 361 IEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTS 540
            + +PW QDAKAKVGSR+IEL+++TAYIQPPA+Q ADGPPDIRPAFVHTFRTVT+  +  
Sbjct: 249 DDSKPWSQDAKAKVGSRVIELLIRTAYIQPPADQRADGPPDIRPAFVHTFRTVTQGERKG 308

Query: 541 SRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLP 690
           SRRYGVIQCD LV KGLER+ARHMVIPYMPMLVPPVKWTGYDKGA+++LP
Sbjct: 309 SRRYGVIQCDPLVLKGLERSARHMVIPYMPMLVPPVKWTGYDKGAHLFLP 358


>ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial [Nicotiana tomentosiformis]
          Length = 1021

 Score =  325 bits (832), Expect = e-101
 Identities = 169/232 (72%), Positives = 185/232 (79%), Gaps = 2/232 (0%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           E   +GKSKAAYAKY   LPADMMAVITMHKLM LLM GG+HG ARVVQAA VIGDAIEQ
Sbjct: 244 ELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQ 303

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKLRQRVTTLMKKQKLRAVRQIVN 354
           EVRIH FL                   DG    QEQEKLR++VT LMKKQKLRAV QIV 
Sbjct: 304 EVRIHNFLEKTKKQKAEKDKQK----EDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVR 359

Query: 355 KQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIK 534
           +Q + +PWGQDAKAKVGSRLIEL+LQTAYIQPPANQLA  PPDIRPAF+H+ RTV K+ K
Sbjct: 360 RQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETK 419

Query: 535 TSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLP 690
           ++SRRYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWTGYDKG ++YLP
Sbjct: 420 SASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLP 471


>ref|NP_001311818.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial
           [Nicotiana tabacum]
 sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial; AltName:
           Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 2B; Flags: Precursor
 emb|CAC95020.1| mitochondrial and chloroplast RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score =  325 bits (832), Expect = e-101
 Identities = 169/232 (72%), Positives = 185/232 (79%), Gaps = 2/232 (0%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           E   +GKSKAAYAKY   LPADMMAVITMHKLM LLM GG+HG ARVVQAA VIGDAIEQ
Sbjct: 244 ELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQ 303

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKLRQRVTTLMKKQKLRAVRQIVN 354
           EVRIH FL                   DG    QEQEKLR++VT LMKKQKLRAV QIV 
Sbjct: 304 EVRIHNFLEKTKKQKAEKDKQK----EDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVR 359

Query: 355 KQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIK 534
           +Q + +PWGQDAKAKVGSRLIEL+LQTAYIQPPANQLA  PPDIRPAF+H+ RTV K+ K
Sbjct: 360 RQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETK 419

Query: 535 TSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLP 690
           ++SRRYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWTGYDKG ++YLP
Sbjct: 420 SASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLP 471


>gb|KJB42980.1| hypothetical protein B456_007G178100 [Gossypium raimondii]
          Length = 744

 Score =  318 bits (816), Expect = e-101
 Identities = 159/230 (69%), Positives = 181/230 (78%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           E  R GK +A YA Y D LPADM AVITMHKLM LLM GGEHG ARVVQAAC+IGDAIEQ
Sbjct: 249 ELYRSGKLRAGYAAYLDQLPADMAAVITMHKLMGLLMTGGEHGCARVVQAACLIGDAIEQ 308

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQ 360
           EVRI  FL                  S+  I+EQE+LR++VT L+KKQKL AVRQIV  Q
Sbjct: 309 EVRIRNFLENTRKKKVDKEDEDEGSESNAAIKEQERLRKKVTNLIKKQKLPAVRQIVKGQ 368

Query: 361 IEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTS 540
              +PWGQDAKAKVG  LIEL+++TAYIQPPA+QLAD PPDIRPAF+H+F+TV K+ K +
Sbjct: 369 DNTKPWGQDAKAKVGCHLIELLMRTAYIQPPADQLADTPPDIRPAFLHSFKTVVKENKKT 428

Query: 541 SRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLP 690
            RRYGVI+CD LVRKGLERTARHMVIPYMPMLVPPVKWTGYD+GAY++LP
Sbjct: 429 GRRYGVIECDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDRGAYLFLP 478


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris]
 dbj|BAB78465.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris]
          Length = 1020

 Score =  323 bits (828), Expect = e-100
 Identities = 168/232 (72%), Positives = 185/232 (79%), Gaps = 2/232 (0%)
 Frame = +1

Query: 1   EFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQ 180
           E   +GKSKAAYAKYF  LPADMMAVITMHKLM LLM GG+HG ARVVQAA VIGDAIEQ
Sbjct: 243 ELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQ 302

Query: 181 EVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKLRQRVTTLMKKQKLRAVRQIVN 354
           EVRIH FL                   DG    QEQEKLR++VT LMKKQKLRAV QIV 
Sbjct: 303 EVRIHNFLEKTKKQKAEKDKQK----EDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVR 358

Query: 355 KQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIK 534
           +Q + +PWGQDA+AKVGSRLI+L+LQTAYIQPPANQLA  PPDI PAFVH+ RTV K+ K
Sbjct: 359 RQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIPPAFVHSVRTVAKETK 418

Query: 535 TSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLP 690
           ++SRRYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWTGYDKG ++YLP
Sbjct: 419 SASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLP 470