BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00028137
         (558 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN03197.1| U2 snRNP splicing factor, small subunit [Handroan...    67   6e-10
ref|XP_011094422.1| splicing factor U2af small subunit B-like [S...    66   2e-09

>gb|PIN03197.1| U2 snRNP splicing factor, small subunit [Handroanthus
           impetiginosus]
          Length = 314

 Score = 67.4 bits (163), Expect = 6e-10
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = +3

Query: 3   SAERRAKIEQWNREREDGGSSRDHNSKTDDISHGLEHND 119
           S ERRAKIEQWN+ERE+  S+RD+NSKTDDISHG EH+D
Sbjct: 256 SVERRAKIEQWNKEREEAVSARDNNSKTDDISHGHEHHD 294


>ref|XP_011094422.1| splicing factor U2af small subunit B-like [Sesamum indicum]
 ref|XP_011094423.1| splicing factor U2af small subunit B-like [Sesamum indicum]
 ref|XP_011094424.1| splicing factor U2af small subunit B-like [Sesamum indicum]
          Length = 314

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 29/40 (72%), Positives = 36/40 (90%)
 Frame = +3

Query: 3   SAERRAKIEQWNREREDGGSSRDHNSKTDDISHGLEHNDG 122
           SAERRAKIEQWN+ERE+  S+RD++SK+DD SHGL+HN G
Sbjct: 256 SAERRAKIEQWNKEREEAESARDYSSKSDDNSHGLKHNGG 295