BLASTX nr result

ID: Rehmannia30_contig00027938 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00027938
         (740 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIM97986.1| hypothetical protein CDL12_29535 [Handroanthus im...    75   4e-13
ref|XP_011079183.1| extensin [Sesamum indicum]                         71   2e-11
ref|XP_012830419.1| PREDICTED: leucine-rich repeat extensin-like...    59   5e-07

>gb|PIM97986.1| hypothetical protein CDL12_29535 [Handroanthus impetiginosus]
 gb|PIN14927.1| hypothetical protein CDL12_12437 [Handroanthus impetiginosus]
          Length = 167

 Score = 75.1 bits (183), Expect = 4e-13
 Identities = 36/55 (65%), Positives = 38/55 (69%)
 Frame = -1

Query: 587 MCYVGKATKIFIFIXXXXXXXXXXXXXXXLRHHGSHGKSQNCSSDSCPQTTPVIF 423
           MCYVGKATKIFIFI               LRHHG HGKSQ CSSDSCP++TPVIF
Sbjct: 1   MCYVGKATKIFIFIVTVLVITGLILGFGVLRHHGIHGKSQKCSSDSCPESTPVIF 55


>ref|XP_011079183.1| extensin [Sesamum indicum]
          Length = 168

 Score = 70.9 bits (172), Expect = 2e-11
 Identities = 34/55 (61%), Positives = 35/55 (63%)
 Frame = -1

Query: 587 MCYVGKATKIFIFIXXXXXXXXXXXXXXXLRHHGSHGKSQNCSSDSCPQTTPVIF 423
           MCYVGKATKIFIFI               LRHHG HGKS  CS DSCP+ TPVIF
Sbjct: 1   MCYVGKATKIFIFIVTALVVTGLVLGFGLLRHHGLHGKSHKCSPDSCPEATPVIF 55


>ref|XP_012830419.1| PREDICTED: leucine-rich repeat extensin-like protein 3 [Erythranthe
           guttata]
 gb|EYU43105.1| hypothetical protein MIMGU_mgv1a025699mg [Erythranthe guttata]
          Length = 180

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 31/55 (56%), Positives = 33/55 (60%)
 Frame = -1

Query: 587 MCYVGKATKIFIFIXXXXXXXXXXXXXXXLRHHGSHGKSQNCSSDSCPQTTPVIF 423
           MCYVGKATKIFIFI               LR H  HG S  CSSDSCP+ TP+IF
Sbjct: 1   MCYVGKATKIFIFIVTVLAVTGLLLGFGLLRKH-VHGDSHKCSSDSCPEATPLIF 54


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