BLASTX nr result

ID: Rehmannia30_contig00027551 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00027551
         (543 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OIT29285.1| hypothetical protein A4A49_51656, partial [Nicoti...    57   1e-06
ref|XP_019261666.1| PREDICTED: uncharacterized protein LOC109239...    55   9e-06

>gb|OIT29285.1| hypothetical protein A4A49_51656, partial [Nicotiana attenuata]
          Length = 225

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/81 (40%), Positives = 50/81 (61%)
 Frame = -3

Query: 541 LCWDRDCEALIGKPCSVLREGCM*VSFDCLLIVLNHAEEICTLLERIFLFKVQIKSDQLR 362
           L WDR+   LIGK  + L+EG +    +   +V ++  E+  +LER FLFKV IK  +++
Sbjct: 89  LLWDREAMFLIGKSANKLKEGLL----ENTGVVDSYPVELNNILERKFLFKVIIKRSKIQ 144

Query: 361 NYTGAFTVVKLIDDPALISKY 299
                +++VKLIDD  LI+KY
Sbjct: 145 LQGELYSIVKLIDDEQLINKY 165


>ref|XP_019261666.1| PREDICTED: uncharacterized protein LOC109239540 [Nicotiana
           attenuata]
          Length = 377

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
 Frame = -3

Query: 541 LCWDRDCEALIGKPCSVLREGCM*VS---FDCLLIVLNHAEEICTLLERIFLFKVQIKSD 371
           L WDR+   LIGK    L+EG +  S   ++C     +H  EI  +L+R F+FK+ +KS 
Sbjct: 214 LLWDREATKLIGKSADTLKEGVVETSGAAYEC-----SHPLEIEAILDRKFMFKLTVKSS 268

Query: 370 QLRNYTGAFTVVKLIDDPALISKYGYS 290
            +      + VVK+ DD  +I KY  S
Sbjct: 269 NIDENDEVYIVVKVSDDEDIIQKYSPS 295


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