BLASTX nr result

ID: Rehmannia30_contig00027297 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00027297
         (682 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011085379.1| homeobox-DDT domain protein RLT2-like [Sesam...    61   5e-07

>ref|XP_011085379.1| homeobox-DDT domain protein RLT2-like [Sesamum indicum]
          Length = 1797

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 50/147 (34%), Positives = 59/147 (40%), Gaps = 3/147 (2%)
 Frame = -3

Query: 680  NVVEKRGAKDKIVFDDNTGLKQEEWNLTETTPFEIEGAEKAXXXXXXXXXXXNGQASADE 501
            NVVEK G K K  F D  G +QEEWNL E  P E+ GAE             N  ASADE
Sbjct: 1640 NVVEKSGMK-KSNFGDTPGRQQEEWNLEEI-PMEVPGAENVSSSGRSEFEDDNSPASADE 1697

Query: 500  YDD---GFSGGVRSGKSEHYTMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 330
            YDD       GVR GKS ++                                       +
Sbjct: 1698 YDDISVDDIAGVRDGKSRYFA--TVDDYKVGGEDDGHDDGDDVDENDEYEGDDGDNQQRD 1755

Query: 329  YYDEGYINSDYNEEPIQSKGEERVGKV 249
            +Y +GY NSD++EE  Q  G E    V
Sbjct: 1756 FYVDGYFNSDFHEEGNQPTGVEHARDV 1782


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