BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00025680
         (404 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011093815.1| mediator of RNA polymerase II transcription ...   103   1e-26
gb|ALT31532.1| mediator of RNA polymerase II transcription subun...   106   8e-26
ref|XP_011093814.1| mediator of RNA polymerase II transcription ...   103   6e-25
ref|XP_022888484.1| mediator of RNA polymerase II transcription ...    97   1e-23
emb|CDP03101.1| unnamed protein product [Coffea canephora]             98   2e-22
ref|XP_009767146.1| PREDICTED: mediator of RNA polymerase II tra...    94   3e-22
ref|XP_009593868.1| PREDICTED: mediator of RNA polymerase II tra...    93   4e-22
ref|XP_022888483.1| mediator of RNA polymerase II transcription ...    97   4e-22
ref|XP_022888482.1| mediator of RNA polymerase II transcription ...    97   4e-22
gb|PIN16559.1| hypothetical protein CDL12_10784 [Handroanthus im...    96   6e-22
ref|XP_019246924.1| PREDICTED: mediator of RNA polymerase II tra...    95   2e-21
ref|XP_019246923.1| PREDICTED: mediator of RNA polymerase II tra...    95   2e-21
ref|XP_015059745.1| PREDICTED: mediator of RNA polymerase II tra...    94   5e-21
ref|XP_006353559.1| PREDICTED: mediator of RNA polymerase II tra...    94   5e-21
ref|XP_019067211.1| PREDICTED: mediator of RNA polymerase II tra...    94   5e-21
gb|PHT83165.1| Mediator of RNA polymerase II transcription subun...    91   5e-21
ref|XP_019173974.1| PREDICTED: mediator of RNA polymerase II tra...    92   4e-20
ref|XP_019173351.1| PREDICTED: mediator of RNA polymerase II tra...    92   4e-20
ref|XP_016570255.1| PREDICTED: mediator of RNA polymerase II tra...    91   5e-20
ref|XP_012083995.1| mediator of RNA polymerase II transcription ...    91   1e-19

>ref|XP_011093815.1| mediator of RNA polymerase II transcription subunit 20a isoform X2
           [Sesamum indicum]
          Length = 80

 Score =  103 bits (258), Expect = 1e-26
 Identities = 50/55 (90%), Positives = 53/55 (96%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           +LSKRSLPGHFVHIEPNF+EYGL DQYS+QHTAVQYASITAQMIATSQSVQA RN
Sbjct: 26  SLSKRSLPGHFVHIEPNFAEYGLADQYSLQHTAVQYASITAQMIATSQSVQATRN 80


>gb|ALT31532.1| mediator of RNA polymerase II transcription subunit 20-like
           protein, partial [Rehmannia glutinosa]
          Length = 219

 Score =  106 bits (264), Expect = 8e-26
 Identities = 52/52 (100%), Positives = 52/52 (100%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQA 247
           ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQA
Sbjct: 168 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQA 219


>ref|XP_011093814.1| mediator of RNA polymerase II transcription subunit 20a isoform X1
           [Sesamum indicum]
          Length = 222

 Score =  103 bits (258), Expect = 6e-25
 Identities = 50/55 (90%), Positives = 53/55 (96%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           +LSKRSLPGHFVHIEPNF+EYGL DQYS+QHTAVQYASITAQMIATSQSVQA RN
Sbjct: 168 SLSKRSLPGHFVHIEPNFAEYGLADQYSLQHTAVQYASITAQMIATSQSVQATRN 222


>ref|XP_022888484.1| mediator of RNA polymerase II transcription subunit 20a isoform X3
           [Olea europaea var. sylvestris]
          Length = 82

 Score = 96.7 bits (239), Expect = 1e-23
 Identities = 46/55 (83%), Positives = 50/55 (90%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           ALSKRSLPGHFVHIEPNF+E+GL DQY+ QHTAVQYASI AQMIAT+QSVQ  RN
Sbjct: 28  ALSKRSLPGHFVHIEPNFAEFGLSDQYTAQHTAVQYASIMAQMIATAQSVQPVRN 82


>emb|CDP03101.1| unnamed protein product [Coffea canephora]
          Length = 222

 Score = 97.8 bits (242), Expect = 2e-22
 Identities = 47/55 (85%), Positives = 50/55 (90%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           ALSKRSLPGHFVHIEPNF+EYGL D+YS QHTA QYASI AQMIAT+QS QAARN
Sbjct: 168 ALSKRSLPGHFVHIEPNFAEYGLSDEYSSQHTAAQYASIMAQMIATAQSAQAARN 222


>ref|XP_009767146.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Nicotiana sylvestris]
          Length = 126

 Score = 94.4 bits (233), Expect = 3e-22
 Identities = 45/55 (81%), Positives = 49/55 (89%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           AL+KRSLPGHFVHIEPNFSE+GL DQY+ QH AVQYASI AQMIAT+QS QA RN
Sbjct: 72  ALAKRSLPGHFVHIEPNFSEFGLSDQYTSQHAAVQYASIMAQMIATAQSAQAVRN 126


>ref|XP_009593868.1| PREDICTED: mediator of RNA polymerase II transcription subunit 20a
           [Nicotiana tomentosiformis]
          Length = 80

 Score = 92.8 bits (229), Expect = 4e-22
 Identities = 45/55 (81%), Positives = 49/55 (89%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           AL+KRSLPGHFVHIEP FSE+GL DQY+ QHTAVQYASI AQMIAT+QS QA RN
Sbjct: 26  ALAKRSLPGHFVHIEPIFSEFGLSDQYTSQHTAVQYASIMAQMIATAQSAQAVRN 80


>ref|XP_022888483.1| mediator of RNA polymerase II transcription subunit 20a isoform X2
           [Olea europaea var. sylvestris]
          Length = 222

 Score = 96.7 bits (239), Expect = 4e-22
 Identities = 46/55 (83%), Positives = 50/55 (90%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           ALSKRSLPGHFVHIEPNF+E+GL DQY+ QHTAVQYASI AQMIAT+QSVQ  RN
Sbjct: 168 ALSKRSLPGHFVHIEPNFAEFGLSDQYTAQHTAVQYASIMAQMIATAQSVQPVRN 222


>ref|XP_022888482.1| mediator of RNA polymerase II transcription subunit 20a isoform X1
           [Olea europaea var. sylvestris]
          Length = 223

 Score = 96.7 bits (239), Expect = 4e-22
 Identities = 46/55 (83%), Positives = 50/55 (90%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           ALSKRSLPGHFVHIEPNF+E+GL DQY+ QHTAVQYASI AQMIAT+QSVQ  RN
Sbjct: 169 ALSKRSLPGHFVHIEPNFAEFGLSDQYTAQHTAVQYASIMAQMIATAQSVQPVRN 223


>gb|PIN16559.1| hypothetical protein CDL12_10784 [Handroanthus impetiginosus]
          Length = 222

 Score = 96.3 bits (238), Expect = 6e-22
 Identities = 46/55 (83%), Positives = 50/55 (90%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           ALSKRSLPGHFVH EPNF+EYGL D+Y+VQHTAVQYA+I AQMIATSQS QA RN
Sbjct: 168 ALSKRSLPGHFVHNEPNFAEYGLSDEYTVQHTAVQYANIMAQMIATSQSAQATRN 222


>ref|XP_019246924.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like isoform X2 [Nicotiana attenuata]
          Length = 222

 Score = 95.1 bits (235), Expect = 2e-21
 Identities = 45/55 (81%), Positives = 50/55 (90%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           AL+KRSLPGHFVHIEPNFSE+GL D+Y+ QHTAVQYASI AQMIAT+QS QA RN
Sbjct: 168 ALAKRSLPGHFVHIEPNFSEFGLSDEYTSQHTAVQYASIMAQMIATAQSAQAVRN 222


>ref|XP_019246923.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like isoform X1 [Nicotiana attenuata]
 gb|OIT01679.1| mediator of rna polymerase ii transcription subunit 20a [Nicotiana
           attenuata]
          Length = 223

 Score = 95.1 bits (235), Expect = 2e-21
 Identities = 45/55 (81%), Positives = 50/55 (90%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           AL+KRSLPGHFVHIEPNFSE+GL D+Y+ QHTAVQYASI AQMIAT+QS QA RN
Sbjct: 169 ALAKRSLPGHFVHIEPNFSEFGLSDEYTSQHTAVQYASIMAQMIATAQSAQAVRN 223


>ref|XP_015059745.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Solanum pennellii]
          Length = 223

 Score = 94.0 bits (232), Expect = 5e-21
 Identities = 45/55 (81%), Positives = 48/55 (87%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           AL KRSLPGHFVH+EPNFSEYGL DQY+ QHTAVQYASI AQMIAT+QS Q  RN
Sbjct: 169 ALGKRSLPGHFVHVEPNFSEYGLSDQYTSQHTAVQYASIMAQMIATAQSSQPMRN 223


>ref|XP_006353559.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Solanum tuberosum]
          Length = 223

 Score = 94.0 bits (232), Expect = 5e-21
 Identities = 45/55 (81%), Positives = 48/55 (87%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           AL KRSLPGHFVH+EPNFSEYGL DQY+ QHTAVQYASI AQMIAT+QS Q  RN
Sbjct: 169 ALGKRSLPGHFVHVEPNFSEYGLSDQYTSQHTAVQYASIMAQMIATAQSSQPMRN 223


>ref|XP_019067211.1| PREDICTED: mediator of RNA polymerase II transcription subunit 20a
           [Solanum lycopersicum]
          Length = 223

 Score = 94.0 bits (232), Expect = 5e-21
 Identities = 45/55 (81%), Positives = 48/55 (87%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           AL KRSLPGHFVH+EPNFSEYGL DQY+ QHTAVQYASI AQMIAT+QS Q  RN
Sbjct: 169 ALGKRSLPGHFVHVEPNFSEYGLSDQYTSQHTAVQYASIMAQMIATAQSSQPMRN 223


>gb|PHT83165.1| Mediator of RNA polymerase II transcription subunit 20b [Capsicum
           annuum]
          Length = 126

 Score = 91.3 bits (225), Expect = 5e-21
 Identities = 44/55 (80%), Positives = 46/55 (83%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           AL KRSLPGHFVHIEPNFSE+GL DQY  QHTAVQYASI AQMIAT+ S Q  RN
Sbjct: 72  ALGKRSLPGHFVHIEPNFSEFGLSDQYISQHTAVQYASIMAQMIATAHSAQTGRN 126


>ref|XP_019173974.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Ipomoea nil]
 ref|XP_019173975.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Ipomoea nil]
          Length = 222

 Score = 91.7 bits (226), Expect = 4e-20
 Identities = 43/55 (78%), Positives = 48/55 (87%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           ALSKRSLPGHF+HIEPNF+E+GLPDQY+ QHTAVQYA I AQMIAT+QS    RN
Sbjct: 168 ALSKRSLPGHFMHIEPNFTEFGLPDQYTSQHTAVQYACIMAQMIATAQSAAQMRN 222


>ref|XP_019173351.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Ipomoea nil]
          Length = 222

 Score = 91.7 bits (226), Expect = 4e-20
 Identities = 43/55 (78%), Positives = 48/55 (87%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           ALSKRSLPGHF+HIEPNF+E+GLPDQY+ QHTAVQYA I AQMIAT+QS    RN
Sbjct: 168 ALSKRSLPGHFMHIEPNFTEFGLPDQYTSQHTAVQYACIMAQMIATAQSAAQMRN 222


>ref|XP_016570255.1| PREDICTED: mediator of RNA polymerase II transcription subunit 20a
           [Capsicum annuum]
          Length = 223

 Score = 91.3 bits (225), Expect = 5e-20
 Identities = 44/55 (80%), Positives = 46/55 (83%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           AL KRSLPGHFVHIEPNFSE+GL DQY  QHTAVQYASI AQMIAT+ S Q  RN
Sbjct: 169 ALGKRSLPGHFVHIEPNFSEFGLSDQYISQHTAVQYASIMAQMIATAHSAQTGRN 223


>ref|XP_012083995.1| mediator of RNA polymerase II transcription subunit 20a [Jatropha
           curcas]
 gb|KDP27849.1| hypothetical protein JCGZ_18929 [Jatropha curcas]
          Length = 221

 Score = 90.5 bits (223), Expect = 1e-19
 Identities = 44/55 (80%), Positives = 50/55 (90%)
 Frame = -3

Query: 402 ALSKRSLPGHFVHIEPNFSEYGLPDQYSVQHTAVQYASITAQMIATSQSVQAARN 238
           A+SKRSLPGHF+HIEPNF+EYGL DQYS QHTAVQYA++ AQ+IAT QSVQA RN
Sbjct: 168 AISKRSLPGHFMHIEPNFAEYGLLDQYSSQHTAVQYATVVAQLIAT-QSVQATRN 221