BLASTX nr result
ID: Rehmannia30_contig00025636
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00025636
(663 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011099592.1| DNA-directed RNA polymerase III subunit RPC5... 262 4e-80
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 213 1e-61
emb|CDP02819.1| unnamed protein product [Coffea canephora] 213 1e-61
gb|EYU44675.1| hypothetical protein MIMGU_mgv1a004477mg [Erythra... 204 1e-59
ref|XP_012855127.1| PREDICTED: DNA-directed RNA polymerase III s... 204 2e-58
gb|KZV19013.1| hypothetical protein F511_08441 [Dorcoceras hygro... 199 2e-56
ref|XP_022870607.1| DNA-directed RNA polymerase III subunit RPC5... 196 1e-55
ref|XP_022775288.1| DNA-directed RNA polymerase III subunit RPC5... 191 2e-53
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati... 189 2e-53
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo... 189 1e-52
ref|XP_017969869.1| PREDICTED: DNA-directed RNA polymerase III s... 189 1e-52
ref|XP_015890226.1| PREDICTED: DNA-directed RNA polymerase III s... 189 1e-52
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati... 189 2e-52
ref|XP_017969867.1| PREDICTED: DNA-directed RNA polymerase III s... 189 2e-52
ref|XP_021273985.1| DNA-directed RNA polymerase III subunit RPC5... 188 4e-52
emb|CAN60111.1| hypothetical protein VITISV_023619 [Vitis vinifera] 176 6e-51
gb|POO02573.1| DNA-directed RNA polymerase III subunit Rpc [Trem... 181 2e-49
ref|XP_016697026.1| PREDICTED: DNA-directed RNA polymerase III s... 179 8e-49
ref|XP_017638248.1| PREDICTED: DNA-directed RNA polymerase III s... 179 1e-48
gb|KJB43539.1| hypothetical protein B456_007G205200 [Gossypium r... 178 1e-48
>ref|XP_011099592.1| DNA-directed RNA polymerase III subunit RPC5 [Sesamum indicum]
Length = 683
Score = 262 bits (669), Expect = 4e-80
Identities = 131/206 (63%), Positives = 152/206 (73%)
Frame = +3
Query: 3 SMESLPIPKKEELGIKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXXMXXXXXXXXXXXXX 182
++E LP+PKKEE GIK DIKPE+ ND +M M
Sbjct: 49 TVEGLPVPKKEEPGIKPDIKPEFANDGNDMDVEVKPEVKEEEGDDLMETEAEAEPDDAIV 108
Query: 183 XXXXXIDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDV 362
IDVYFTP +D TRLYVLQYPLRPLWRPYELD+ C+EVRVKP SAE+E+DLAVDV
Sbjct: 109 RE---IDVYFTPSIDSNTRLYVLQYPLRPLWRPYELDDRCDEVRVKPASAELEVDLAVDV 165
Query: 363 DSKNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHL 542
DSKNYDSGADPRVQMKKQILT+ WKPPH SG+AVG+LTGNKL+LNP+H VVQLRPS+QHL
Sbjct: 166 DSKNYDSGADPRVQMKKQILTSSWKPPHASGYAVGILTGNKLHLNPVHAVVQLRPSMQHL 225
Query: 543 ESRESKRKTVGSSNVNDTVKSEEPQE 620
++++SKRKT+ NV D VK EEPQE
Sbjct: 226 DAKDSKRKTI---NVEDRVKLEEPQE 248
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 213 bits (541), Expect = 1e-61
Identities = 101/138 (73%), Positives = 113/138 (81%)
Frame = +3
Query: 198 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 377
IDVY TP +DP T+LYVLQYPLRPLWRPYELD+ CEEVRVK SAEVE+DLAVDVDSKNY
Sbjct: 111 IDVYLTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNY 170
Query: 378 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 557
DS ADPRV M KQ LT+ WKPP +G+AVGVL GNKL+LNPIH VVQLRPS+QH + S
Sbjct: 171 DSDADPRVSMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESS 230
Query: 558 KRKTVGSSNVNDTVKSEE 611
KR+T SSN+ D K EE
Sbjct: 231 KRRTTASSNLEDNTKGEE 248
>emb|CDP02819.1| unnamed protein product [Coffea canephora]
Length = 687
Score = 213 bits (543), Expect = 1e-61
Identities = 101/138 (73%), Positives = 113/138 (81%)
Frame = +3
Query: 198 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 377
IDVY TP +DP T+LYVLQYPLRPLWRPYELD+ CEEVRVK SAEVE+DLAVDVDSKNY
Sbjct: 111 IDVYLTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKSKSAEVEVDLAVDVDSKNY 170
Query: 378 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 557
DS ADPRV M KQ LT+ WKPP +G+AVGVL GNKL+LNPIH VVQLRPS+QH + S
Sbjct: 171 DSDADPRVSMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESS 230
Query: 558 KRKTVGSSNVNDTVKSEE 611
KR+T SSN+ D K EE
Sbjct: 231 KRRTTASSNLEDNTKGEE 248
>gb|EYU44675.1| hypothetical protein MIMGU_mgv1a004477mg [Erythranthe guttata]
Length = 525
Score = 204 bits (520), Expect = 1e-59
Identities = 112/211 (53%), Positives = 134/211 (63%), Gaps = 7/211 (3%)
Frame = +3
Query: 6 MESLPIPKKEELG--IKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXXMXXXXXXXXXXXX 179
M++LP+PKKEE I+ DIKPE+ N A+EM
Sbjct: 50 MDTLPLPKKEEPKPEIEPDIKPEHANGAMEMDVEVKPDVKVKEDLMETEVAESVLDPVVK 109
Query: 180 XXXXXX----IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEID 347
IDVY VDP T L+V QYPLRPLWRPYELDE C+EVRVKP+ VEID
Sbjct: 110 ESTVDEVVREIDVYLNHSVDPNTCLHVWQYPLRPLWRPYELDEKCDEVRVKPSGEGVEID 169
Query: 348 LAVDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRP 527
LAVD SKNYD+ ADP++QM+KQ L + W PPH SG AV VL GNKLYLNPIH VVQLRP
Sbjct: 170 LAVDTYSKNYDTTADPKLQMQKQTLRSTWMPPHASGQAVAVLVGNKLYLNPIHAVVQLRP 229
Query: 528 SVQHLESRES-KRKTVGSSNVNDTVKSEEPQ 617
S++HL++ +S K+KT SN D+VK E+PQ
Sbjct: 230 SMKHLDAEDSKKKKTNARSNTKDSVKLEDPQ 260
>ref|XP_012855127.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5
[Erythranthe guttata]
Length = 676
Score = 204 bits (520), Expect = 2e-58
Identities = 112/211 (53%), Positives = 134/211 (63%), Gaps = 7/211 (3%)
Frame = +3
Query: 6 MESLPIPKKEELG--IKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXXMXXXXXXXXXXXX 179
M++LP+PKKEE I+ DIKPE+ N A+EM
Sbjct: 50 MDTLPLPKKEEPKPEIEPDIKPEHANGAMEMDVEVKPDVKVKEDLMETEVAESVLDPVVK 109
Query: 180 XXXXXX----IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEID 347
IDVY VDP T L+V QYPLRPLWRPYELDE C+EVRVKP+ VEID
Sbjct: 110 ESTVDEVVREIDVYLNHSVDPNTCLHVWQYPLRPLWRPYELDEKCDEVRVKPSGEGVEID 169
Query: 348 LAVDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRP 527
LAVD SKNYD+ ADP++QM+KQ L + W PPH SG AV VL GNKLYLNPIH VVQLRP
Sbjct: 170 LAVDTYSKNYDTTADPKLQMQKQTLRSTWMPPHASGQAVAVLVGNKLYLNPIHAVVQLRP 229
Query: 528 SVQHLESRES-KRKTVGSSNVNDTVKSEEPQ 617
S++HL++ +S K+KT SN D+VK E+PQ
Sbjct: 230 SMKHLDAEDSKKKKTNARSNTKDSVKLEDPQ 260
>gb|KZV19013.1| hypothetical protein F511_08441 [Dorcoceras hygrometricum]
Length = 686
Score = 199 bits (507), Expect = 2e-56
Identities = 107/206 (51%), Positives = 130/206 (63%), Gaps = 2/206 (0%)
Frame = +3
Query: 9 ESLPIPKKEELGIKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXX--MXXXXXXXXXXXXX 182
+S+P PKKEELG+K PE+ ND +EM
Sbjct: 60 DSIPSPKKEELGVK----PEFANDVVEMDIDFKHGEIVDNEVKKEETEDLMETGEGEAED 115
Query: 183 XXXXXIDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDV 362
IDVY T +DP TRLYVLQYPLRPLWRPYE++E CE+VRVKP S E+E+DLA+D
Sbjct: 116 EVVREIDVYLTSSLDPNTRLYVLQYPLRPLWRPYEMEERCEQVRVKPASNEIEVDLAIDF 175
Query: 363 DSKNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHL 542
+SKNYD A R MK+Q L + WKPPH SG+AVG L+LNP+H VVQLRPS++HL
Sbjct: 176 ESKNYDRDAGSRFLMKRQTLASAWKPPHTSGYAVG------LHLNPVHAVVQLRPSMEHL 229
Query: 543 ESRESKRKTVGSSNVNDTVKSEEPQE 620
+SRESKRK V S V TVK+EE +E
Sbjct: 230 DSRESKRKVV--SGVEGTVKAEENKE 253
>ref|XP_022870607.1| DNA-directed RNA polymerase III subunit RPC5-like [Olea europaea
var. sylvestris]
ref|XP_022870608.1| DNA-directed RNA polymerase III subunit RPC5-like [Olea europaea
var. sylvestris]
Length = 627
Score = 196 bits (498), Expect = 1e-55
Identities = 95/141 (67%), Positives = 111/141 (78%)
Frame = +3
Query: 198 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 377
IDVYF P +DP TRLYVLQYPLRP+WRPYEL++ CEEVRVKP S+E EIDLAV+ DS NY
Sbjct: 100 IDVYFAPSIDPYTRLYVLQYPLRPVWRPYELEDRCEEVRVKPASSEFEIDLAVNFDSDNY 159
Query: 378 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 557
D ADPRVQ+ KQ L + WKPP SG+AVGVL GNKL+LNPIH+VVQLRPS+QHL+ R+S
Sbjct: 160 DRDADPRVQIMKQTLASSWKPPRTSGYAVGVLRGNKLHLNPIHSVVQLRPSMQHLKPRDS 219
Query: 558 KRKTVGSSNVNDTVKSEEPQE 620
K K + +V EEP E
Sbjct: 220 KNKKTETGSV------EEPME 234
>ref|XP_022775288.1| DNA-directed RNA polymerase III subunit RPC5 [Durio zibethinus]
Length = 697
Score = 191 bits (486), Expect = 2e-53
Identities = 90/141 (63%), Positives = 113/141 (80%)
Frame = +3
Query: 198 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 377
IDVYFTP +D T+LYVLQYPLRP WRPYELDE CEEVRVKP+S EVEI+++VDVDS NY
Sbjct: 122 IDVYFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPSSGEVEIEMSVDVDSNNY 181
Query: 378 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 557
DS ++++ KQ L++ W PP +GFAVGVLTG+KL+LNPIH VVQLRPS++HL+ S
Sbjct: 182 DSECASKLKITKQTLSSSWLPPRATGFAVGVLTGDKLHLNPIHAVVQLRPSLEHLKPSVS 241
Query: 558 KRKTVGSSNVNDTVKSEEPQE 620
KRK+ +++ TVK EEP +
Sbjct: 242 KRKSTVATDAEVTVKVEEPND 262
>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
[Theobroma cacao]
Length = 588
Score = 189 bits (481), Expect = 2e-53
Identities = 91/141 (64%), Positives = 109/141 (77%)
Frame = +3
Query: 198 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 377
IDV+FTP +D T+LYVLQYPLRP WRPYELDE CEEVRVKP S EVE+DLAVDVDS NY
Sbjct: 28 IDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNY 87
Query: 378 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 557
DS R++M KQ L++ W PP +G+AVGVL G+KL+LNPIH VVQLRPS+ HL+ S
Sbjct: 88 DSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVS 147
Query: 558 KRKTVGSSNVNDTVKSEEPQE 620
KRK +++ TVK EEP +
Sbjct: 148 KRKNAAAADAEVTVKVEEPND 168
>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
Length = 700
Score = 189 bits (481), Expect = 1e-52
Identities = 91/141 (64%), Positives = 109/141 (77%)
Frame = +3
Query: 198 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 377
IDV+FTP +D T+LYVLQYPLRP WRPYELDE CEEVRVKP S EVE+DLAVDVDS NY
Sbjct: 125 IDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNY 184
Query: 378 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 557
DS R++M KQ L++ W PP +G+AVGVL G+KL+LNPIH VVQLRPS+ HL+ S
Sbjct: 185 DSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVS 244
Query: 558 KRKTVGSSNVNDTVKSEEPQE 620
KRK +++ TVK EEP +
Sbjct: 245 KRKNAAAADAEVTVKVEEPND 265
>ref|XP_017969869.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
[Theobroma cacao]
Length = 702
Score = 189 bits (481), Expect = 1e-52
Identities = 91/141 (64%), Positives = 109/141 (77%)
Frame = +3
Query: 198 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 377
IDV+FTP +D T+LYVLQYPLRP WRPYELDE CEEVRVKP S EVE+DLAVDVDS NY
Sbjct: 127 IDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNY 186
Query: 378 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 557
DS R++M KQ L++ W PP +G+AVGVL G+KL+LNPIH VVQLRPS+ HL+ S
Sbjct: 187 DSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVS 246
Query: 558 KRKTVGSSNVNDTVKSEEPQE 620
KRK +++ TVK EEP +
Sbjct: 247 KRKNAAAADAEVTVKVEEPND 267
>ref|XP_015890226.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Ziziphus
jujuba]
Length = 696
Score = 189 bits (480), Expect = 1e-52
Identities = 90/141 (63%), Positives = 109/141 (77%)
Frame = +3
Query: 198 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 377
IDV+ P +D +T+LYVLQYPLRP WRPYELDE CEEVRVKP SAEVE+DLA+DVDSKNY
Sbjct: 118 IDVFLNPKIDDETQLYVLQYPLRPWWRPYELDERCEEVRVKPASAEVEVDLALDVDSKNY 177
Query: 378 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 557
D +++M KQ L+ W+PP +G+AVGVL GNKL+LNPIH VVQLRPS++HL S
Sbjct: 178 DQDFGSKLRMTKQTLSCSWEPPRKTGYAVGVLMGNKLHLNPIHAVVQLRPSLEHLRCPSS 237
Query: 558 KRKTVGSSNVNDTVKSEEPQE 620
KRK + + +DTVK EE E
Sbjct: 238 KRKNSVTGDADDTVKLEESSE 258
>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao]
Length = 736
Score = 189 bits (481), Expect = 2e-52
Identities = 91/141 (64%), Positives = 109/141 (77%)
Frame = +3
Query: 198 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 377
IDV+FTP +D T+LYVLQYPLRP WRPYELDE CEEVRVKP S EVE+DLAVDVDS NY
Sbjct: 125 IDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNY 184
Query: 378 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 557
DS R++M KQ L++ W PP +G+AVGVL G+KL+LNPIH VVQLRPS+ HL+ S
Sbjct: 185 DSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVS 244
Query: 558 KRKTVGSSNVNDTVKSEEPQE 620
KRK +++ TVK EEP +
Sbjct: 245 KRKNAAAADAEVTVKVEEPND 265
>ref|XP_017969867.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
[Theobroma cacao]
Length = 738
Score = 189 bits (481), Expect = 2e-52
Identities = 91/141 (64%), Positives = 109/141 (77%)
Frame = +3
Query: 198 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 377
IDV+FTP +D T+LYVLQYPLRP WRPYELDE CEEVRVKP S EVE+DLAVDVDS NY
Sbjct: 127 IDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNY 186
Query: 378 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 557
DS R++M KQ L++ W PP +G+AVGVL G+KL+LNPIH VVQLRPS+ HL+ S
Sbjct: 187 DSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVS 246
Query: 558 KRKTVGSSNVNDTVKSEEPQE 620
KRK +++ TVK EEP +
Sbjct: 247 KRKNAAAADAEVTVKVEEPND 267
>ref|XP_021273985.1| DNA-directed RNA polymerase III subunit RPC5 [Herrania umbratica]
Length = 707
Score = 188 bits (477), Expect = 4e-52
Identities = 89/141 (63%), Positives = 108/141 (76%)
Frame = +3
Query: 198 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 377
IDV+FTP +D T+LYVLQYPLRP WRPYELDE CEEVRVKP + EVE+D+AVDVDS NY
Sbjct: 132 IDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPATGEVEMDMAVDVDSNNY 191
Query: 378 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 557
DS R+ M KQ L++ W PP +G+AVGVL G+KL+LNPIH VVQLRPS+ HL+ S
Sbjct: 192 DSERASRLMMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMYHLKPSVS 251
Query: 558 KRKTVGSSNVNDTVKSEEPQE 620
KRK +++ TVK EEP +
Sbjct: 252 KRKNAAAADAEVTVKVEEPND 272
>emb|CAN60111.1| hypothetical protein VITISV_023619 [Vitis vinifera]
Length = 282
Score = 176 bits (445), Expect = 6e-51
Identities = 86/142 (60%), Positives = 104/142 (73%), Gaps = 1/142 (0%)
Frame = +3
Query: 198 IDVYFTPF-VDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKN 374
IDV+FTP D T++YVLQYPLRP WRPYEL E C+EVRVKP SAEVE+DL++DVDSKN
Sbjct: 106 IDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKN 165
Query: 375 YDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRE 554
YD +MKKQ L+ WKPP +G+ VGVL GNKL+LNPIH VVQLRPS+++L S
Sbjct: 166 YDPDVPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGG 225
Query: 555 SKRKTVGSSNVNDTVKSEEPQE 620
+KRK + + N VK E E
Sbjct: 226 AKRKNNVTGDTNSAVKLEVSNE 247
>gb|POO02573.1| DNA-directed RNA polymerase III subunit Rpc [Trema orientalis]
Length = 673
Score = 181 bits (458), Expect = 2e-49
Identities = 84/141 (59%), Positives = 106/141 (75%)
Frame = +3
Query: 198 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 377
IDV+F P +D T+LYVLQYPLRP WRPYELDE CEEVRVKP S EVE+DL++DV+SKNY
Sbjct: 96 IDVFFNPKIDDDTQLYVLQYPLRPCWRPYELDERCEEVRVKPGSGEVELDLSMDVESKNY 155
Query: 378 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 557
D +++M KQ L++LW+ P +G+ VGVLTGNKL+LNPIH V QLRPS+ H S S
Sbjct: 156 DQDCGTKLKMTKQTLSSLWRTPRATGYVVGVLTGNKLHLNPIHAVAQLRPSLNHFSSGGS 215
Query: 558 KRKTVGSSNVNDTVKSEEPQE 620
+RK + + D++K EE E
Sbjct: 216 ERKINVAGDAEDSIKLEESSE 236
>ref|XP_016697026.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
isoform X1 [Gossypium hirsutum]
Length = 703
Score = 179 bits (454), Expect = 8e-49
Identities = 87/137 (63%), Positives = 106/137 (77%)
Frame = +3
Query: 198 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 377
IDV+FTP +D +LYVLQYPLRP WRPYELDE C+EVRVKP S EVEID++VDVDS NY
Sbjct: 128 IDVFFTPSIDADAQLYVLQYPLRPCWRPYELDERCKEVRVKPDSGEVEIDMSVDVDSNNY 187
Query: 378 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 557
DS + +++M KQ L++ W PP SG+AVGVL G+KL+LNPIH VVQLRPS+ HL+S S
Sbjct: 188 DSESANKLKMTKQTLSSSWLPPRPSGYAVGVLMGDKLHLNPIHAVVQLRPSLAHLKSGVS 247
Query: 558 KRKTVGSSNVNDTVKSE 608
KRK ++ TVK E
Sbjct: 248 KRKDTVAAEAEVTVKVE 264
>ref|XP_017638248.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Gossypium
arboreum]
gb|KHG05676.1| DNA-directed RNA polymerase III subunit RPC5 [Gossypium arboreum]
Length = 710
Score = 179 bits (453), Expect = 1e-48
Identities = 86/137 (62%), Positives = 106/137 (77%)
Frame = +3
Query: 198 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 377
IDV+FTP +D +LYVLQYPLRP WRPYELDE C+EVRVKP S EVEID++VD+DS NY
Sbjct: 135 IDVFFTPSIDADAQLYVLQYPLRPCWRPYELDERCKEVRVKPDSGEVEIDMSVDIDSNNY 194
Query: 378 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 557
DS + +++M KQ L++ W PP SG+AVGVL G+KL+LNPIH VVQLRPS+ HL+S S
Sbjct: 195 DSESANKLKMTKQTLSSSWLPPRPSGYAVGVLMGDKLHLNPIHAVVQLRPSLAHLKSGVS 254
Query: 558 KRKTVGSSNVNDTVKSE 608
KRK ++ TVK E
Sbjct: 255 KRKDTVAAEAEVTVKVE 271
>gb|KJB43539.1| hypothetical protein B456_007G205200 [Gossypium raimondii]
Length = 653
Score = 178 bits (451), Expect = 1e-48
Identities = 87/137 (63%), Positives = 106/137 (77%)
Frame = +3
Query: 198 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 377
IDV+FTP +D +LYVLQYPLRP WRPYELDE C+EVRVKP S EVEID++VDVDS NY
Sbjct: 128 IDVFFTPSIDADAQLYVLQYPLRPCWRPYELDERCKEVRVKPDSWEVEIDMSVDVDSNNY 187
Query: 378 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 557
DS + +++M KQ L++ W PP SG+AVGVL G+KL+LNPIH VVQLRPS+ HL+S S
Sbjct: 188 DSESANKLKMTKQTLSSSWLPPRPSGYAVGVLMGDKLHLNPIHAVVQLRPSLAHLKSGVS 247
Query: 558 KRKTVGSSNVNDTVKSE 608
KRK ++ TVK E
Sbjct: 248 KRKDTVAAEAEVTVKVE 264