BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00025413
         (1260 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]            640   0.0  
gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinen...   661   0.0  
gb|PRQ29843.1| putative RNA-directed DNA polymerase [Rosa chinen...   629   0.0  
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   657   0.0  
gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposo...   654   0.0  
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           627   0.0  
gb|KYP50580.1| Retrovirus-related Pol polyprotein from transposo...   594   0.0  
gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposo...   615   0.0  
gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposo...   615   0.0  
gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposo...   614   0.0  
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         617   0.0  
gb|KYP63120.1| Retrovirus-related Pol polyprotein from transposo...   585   0.0  
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]      596   0.0  
gb|KYP42630.1| Retrovirus-related Pol polyprotein from transposo...   559   0.0  
gb|OMO51796.1| Reverse transcriptase, RNA-dependent DNA polymera...   583   0.0  
ref|XP_017609491.1| PREDICTED: retrovirus-related Pol polyprotei...   573   0.0  
ref|XP_013746494.2| uncharacterized protein BNAC09G10640D [Brass...   577   0.0  
gb|PNX95528.1| putative gag/pol polyprotein [Trifolium pratense]      576   0.0  
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    567   0.0  
emb|CAN71038.1| hypothetical protein VITISV_011062 [Vitis vinifera]   541   0.0  

>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  640 bits (1652), Expect = 0.0
 Identities = 307/420 (73%), Positives = 364/420 (86%), Gaps = 1/420 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            ++GEPES QE +SH DK+ WL+AMQ++M+SL+KN TY++V+ PKGKK L+N+W+FK KKD
Sbjct: 168  DEGEPESLQEVLSHSDKDHWLKAMQEDMDSLKKNETYDLVKPPKGKKVLKNRWLFKNKKD 227

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
            G+ K+VK KARLVVKG  QKKGIDFDEIF+PVVKMTSIR+ILGL   +NLELEQ+DVKT+
Sbjct: 228  GN-KLVKRKARLVVKGCHQKKGIDFDEIFAPVVKMTSIRMILGLATCLNLELEQLDVKTA 286

Query: 362  FLHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHGDL EEIYMEQPEGFE+ G +N VCKLKKSLYGLKQAPRQWY KFDS M +  YK+T
Sbjct: 287  FLHGDLHEEIYMEQPEGFEVKGKENFVCKLKKSLYGLKQAPRQWYHKFDSFMSNNEYKRT 346

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
             AD CVY +KF++GNF+ L LYVDD+LIVG+D   I +LK++LSKSFDMKDLGPA+QILG
Sbjct: 347  TADPCVYFRKFSEGNFIILCLYVDDMLIVGQDVEMICRLKEDLSKSFDMKDLGPAKQILG 406

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            M+I RDRK  +LWLSQE YIERVLERFNM NAKPV+ PLA HFKLSK  CP++++E   M
Sbjct: 407  MEIARDRKAGKLWLSQENYIERVLERFNMKNAKPVNTPLAAHFKLSKRCCPTTEKEKESM 466

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
            S +PYSS VGSLMYAMVCTRPDIAHAVG VSR+L+NP K HWEAVKWILRYL+GTS + L
Sbjct: 467  SHIPYSSVVGSLMYAMVCTRPDIAHAVGLVSRYLANPSKVHWEAVKWILRYLRGTSNLSL 526

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
            C+GG +P+LEG+TDADMAGDLD+RKSTSG+L+ FA GA+SWQS+LQKCVALSTTE EYIA
Sbjct: 527  CFGGGEPILEGFTDADMAGDLDNRKSTSGYLFKFARGAISWQSKLQKCVALSTTEVEYIA 586


>gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1340

 Score =  661 bits (1705), Expect = 0.0
 Identities = 311/419 (74%), Positives = 376/419 (89%), Gaps = 1/419 (0%)
 Frame = +2

Query: 5    DGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKDG 184
            DGEPE F+EA +H D +KW+ AM+ EMESL KN TYE+VELPKG+KAL+NKWVFKLK+D 
Sbjct: 818  DGEPECFEEAKTHADCDKWMLAMKSEMESLLKNDTYELVELPKGRKALKNKWVFKLKRDE 877

Query: 185  SGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTSF 364
            + ++ K KARLVVKGF QK+GIDFDEIFSPVVKMTSIR+ILG+ ASM+LE+EQ+DVKT+F
Sbjct: 878  NEQLTKFKARLVVKGFGQKEGIDFDEIFSPVVKMTSIRIILGMAASMDLEVEQLDVKTAF 937

Query: 365  LHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKTN 541
            LHGDL+EEIYMEQPEGFE+ G  ++VCKLKKSLYGLKQAPRQWY KFDS MV  GYK+T+
Sbjct: 938  LHGDLEEEIYMEQPEGFEVEGKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTD 997

Query: 542  ADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILGM 721
            AD CVY+Q+F  GNF+ LLLYVDD+LIVGKD + I +LK +LSKSFDMKDLGPA+QILGM
Sbjct: 998  ADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIHKLKADLSKSFDMKDLGPAKQILGM 1057

Query: 722  QIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEMS 901
            +I RDR+ ++LWLSQE+Y+ERVLERFNM  AK VS PL NHFKLS+ +CP+++ E  +M+
Sbjct: 1058 EITRDRQAKKLWLSQERYVERVLERFNMKEAKSVSSPLGNHFKLSRLSCPTTQVEKDKMA 1117

Query: 902  SVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICLC 1081
             +PYSSAVGSLMYAMVCTRPDIAHAVG VSR+LSNPG+EHWEAVKWIL+YL+GTSK+CLC
Sbjct: 1118 GIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILKYLRGTSKLCLC 1177

Query: 1082 YGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
            +GG++P+LEG+TDAD+AGDLD+RKSTS +L+TF+GGAVSWQS+LQKCVALSTTE+EY+A
Sbjct: 1178 FGGSEPILEGFTDADLAGDLDNRKSTSAYLFTFSGGAVSWQSKLQKCVALSTTESEYLA 1236


>gb|PRQ29843.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 501

 Score =  629 bits (1621), Expect = 0.0
 Identities = 297/397 (74%), Positives = 358/397 (90%), Gaps = 1/397 (0%)
 Frame = +2

Query: 71   MQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKDGSGKVVKHKARLVVKGFQQKKGI 250
            M+ EMESL KN TYE+VELPKG+KAL+NKWVFKLK+D + ++ K KARLVVKGF QK+GI
Sbjct: 1    MKSEMESLLKNDTYELVELPKGRKALKNKWVFKLKRDENEQLTKFKARLVVKGFGQKEGI 60

Query: 251  DFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTSFLHGDLKEEIYMEQPEGFEISG- 427
            DFDEIFSPVVKMTSIR+ILG+ ASM+LE+EQ+DVKT+FLHGDL+EEIYMEQPEGFE+   
Sbjct: 61   DFDEIFSPVVKMTSIRIILGMAASMDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVERK 120

Query: 428  DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKTNADECVYIQKFADGNFVALLLYV 607
             ++VCKLKKSLYGLKQAPRQWY KFDS MV  GYK+T+AD CVY+Q+F  GNF+ LLLYV
Sbjct: 121  QHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNFIILLLYV 180

Query: 608  DDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILGMQIVRDRKNRRLWLSQEKYIERV 787
            DD+LIVGKD + I +LK +LSKSFDMKDLGPA+QILGM+I RDR+ ++LWLSQE+Y+ERV
Sbjct: 181  DDMLIVGKDVSMIRKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERV 240

Query: 788  LERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEMSSVPYSSAVGSLMYAMVCTRPDI 967
            LERFNM  AK VS PL NHFKLS+ +CP+++ E  +M+ +PYSSAVGSLMYAMVCTRPDI
Sbjct: 241  LERFNMKEAKSVSSPLGNHFKLSRLSCPTTQVEKDKMAGIPYSSAVGSLMYAMVCTRPDI 300

Query: 968  AHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICLCYGGADPVLEGYTDADMAGDLDS 1147
            AHAVG VSR+LSNPG+EHWEAVKWIL+YL+GTSK+CLC+GG++P+LEG+TDAD+AGDLD+
Sbjct: 301  AHAVGVVSRYLSNPGREHWEAVKWILKYLRGTSKLCLCFGGSEPILEGFTDADLAGDLDN 360

Query: 1148 RKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
            RKSTS +L+TF+GGAVSWQS+LQKCVALSTTE+EY+A
Sbjct: 361  RKSTSAYLFTFSGGAVSWQSKLQKCVALSTTESEYLA 397


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease
 emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
          Length = 1328

 Score =  657 bits (1694), Expect = 0.0
 Identities = 316/420 (75%), Positives = 374/420 (89%), Gaps = 1/420 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            +D EPES +E +SH +K + ++AMQ+EMESLQKN TY++VELPKGK+ L+ KWVFKLKKD
Sbjct: 807  DDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKD 866

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
            G  K+V++KARLVVKGF+QKKGIDFDEIFSPVVKMTSIR IL L AS++LE+EQ+DVKT+
Sbjct: 867  GDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTA 926

Query: 362  FLHGDLKEEIYMEQPEGFEISGD-NLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHGDL+EEIYMEQPEGFE++G  ++VCKL KSLYGLKQAPRQWY KFDS M SQ Y KT
Sbjct: 927  FLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKT 986

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
             +D CVY ++F++ NF+ LLLYVDD+LIVGKD   I++LK +LSKSFDMKDLGPAQQILG
Sbjct: 987  YSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILG 1046

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            M+IVR+R +R+LWLSQEKYIERVLERFNM NAKPVS PLA H KLSK  CP++ EE G M
Sbjct: 1047 MKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNM 1106

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
            + VPYSSAVGSLMYAMVCTRPDIAHAVG VSRFL NPGKEHWEAVKWILRYL+GT+  CL
Sbjct: 1107 AKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCL 1166

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
            C+GG+DP+L+GYTDADMAGD+D+RKS++G+L+TF+GGA+SWQS+LQKCVALSTTEAEYIA
Sbjct: 1167 CFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIA 1226


>gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1321

 Score =  654 bits (1686), Expect = 0.0
 Identities = 313/420 (74%), Positives = 374/420 (89%), Gaps = 1/420 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            ++GEPESFQE  SHKDK  W++AMQ+EM+SL++N+TYE+V+LPKG++ L+NKWVFKLKKD
Sbjct: 805  DEGEPESFQEVQSHKDKGCWVKAMQEEMDSLKRNNTYELVQLPKGRRVLKNKWVFKLKKD 864

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
            G  K+V+HKARLVVKGF QK+GIDF+EIFSPVVKM SIRVILGLVASM+LELEQ+DVKT+
Sbjct: 865  GD-KLVRHKARLVVKGFSQKQGIDFEEIFSPVVKMCSIRVILGLVASMDLELEQLDVKTA 923

Query: 362  FLHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHGDL EEIYMEQPEGFE+ G +++VCKLKKSLYGLKQAPRQWY KFDS + SQG+K+T
Sbjct: 924  FLHGDLDEEIYMEQPEGFEVKGKEDMVCKLKKSLYGLKQAPRQWYKKFDSFIKSQGFKRT 983

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
            +AD CVYI ++ +G F+ LLLYVDD+LIVG+D   I  LK ELSK+FDMKD+G A+ ILG
Sbjct: 984  DADPCVYINRYPNGKFLILLLYVDDMLIVGQDVQMIKNLKVELSKAFDMKDMGAAKHILG 1043

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            M I+RDRK  +LWLSQE+YIERVLERFNM NAKPV  PL  HFKLSK +CP+ +E+   M
Sbjct: 1044 MDIIRDRKAGKLWLSQERYIERVLERFNMKNAKPVITPLVGHFKLSKKSCPTIREK---M 1100

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
            S++PYSSAVGSLMYAMVCTRPDIAHAVG VSR+LSNPGK HWEAVKWILRYL+GTSK+CL
Sbjct: 1101 STIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGKTHWEAVKWILRYLRGTSKLCL 1160

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
             +GGA P+LEGYTDADMAGDLD RKSTSG+++TF+GGA+SWQS+LQKC++LSTTEAEY+A
Sbjct: 1161 RFGGAKPILEGYTDADMAGDLDDRKSTSGYIFTFSGGAISWQSKLQKCISLSTTEAEYVA 1220


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  627 bits (1616), Expect = 0.0
 Identities = 297/420 (70%), Positives = 365/420 (86%), Gaps = 1/420 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            + GEP+SF+EA+  + KEKW++AMQDE++SL +N T+E+V+LPKGK+AL+NKWVFK+K D
Sbjct: 808  DGGEPDSFEEAIDDEHKEKWIEAMQDEIKSLHENKTFELVKLPKGKRALKNKWVFKMKHD 867

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
                + + KARLVVKGF Q+KGIDFDEIFSPVVKMTSIR +LGL AS+NLE+EQMDVKT+
Sbjct: 868  EHNSLPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGLAASLNLEVEQMDVKTA 927

Query: 362  FLHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHGDL+EEIYMEQP+GF+  G ++ VC+L+KSLYGLKQAPRQWY KF+S M   GYKKT
Sbjct: 928  FLHGDLEEEIYMEQPDGFQQKGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMGQHGYKKT 987

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
             +D CV+ QKF+D +F+ LLLYVDD+LIVG++ ++I+ LK++LSK F MKDLGPA+QILG
Sbjct: 988  TSDHCVFAQKFSDDDFIILLLYVDDMLIVGRNVSRINSLKEQLSKFFAMKDLGPAKQILG 1047

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            M+I+RDR+ ++LWLSQEKYIE+VL+RFNM   K VS PLANHF+LS    PS+ +E  +M
Sbjct: 1048 MRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLSTKQSPSTDDERRKM 1107

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
              +PY+SAVGSLMYAMVCTRPDIAHAVG VSRFLSNPGKEHW+AVKWILRYL+GTSK+CL
Sbjct: 1108 ERIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGTSKLCL 1167

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
            C+G  +PVL GYTDADMAGD+DSRKSTSG+L  F+GGAVSWQS+LQKCVALSTTEAE+IA
Sbjct: 1168 CFGEDNPVLVGYTDADMAGDVDSRKSTSGYLINFSGGAVSWQSKLQKCVALSTTEAEFIA 1227


>gb|KYP50580.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 478

 Score =  594 bits (1531), Expect = 0.0
 Identities = 280/420 (66%), Positives = 356/420 (84%), Gaps = 1/420 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            ++GEPE ++EA+  ++K+KWL AMQDEM+SL  NHTY++V+LPKGK+AL N+W+FK+K++
Sbjct: 4    DEGEPECYEEAIESEEKQKWLDAMQDEMKSLHDNHTYDLVKLPKGKRALENRWIFKVKQE 63

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
             +     +KARLVVKGF+Q+KG+DF+EIFSPVV+M+SIR +L L  +++LE+E+MDVKT 
Sbjct: 64   SNSTSPIYKARLVVKGFRQRKGVDFNEIFSPVVRMSSIRTMLSLATTLDLEVEKMDVKTI 123

Query: 362  FLHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHGDL+EEIYM+QP+GF I G ++ VC+L+KSLYGLKQAPRQWY KF+S M  Q YKKT
Sbjct: 124  FLHGDLEEEIYMKQPDGFLIEGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMCEQDYKKT 183

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
             +D CV+++KF+D +F+ LLLYVDD+LIVGKD +KI +LKK+L +SF MKD+G A++ILG
Sbjct: 184  TSDHCVFVRKFSDDDFIILLLYVDDMLIVGKDVSKIDRLKKQLGESFSMKDMGAAKKILG 243

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            + I+RDRK+++LWLSQE YI+ VL+RF+M N K VS PLA HFKLS   CPS++ E   M
Sbjct: 244  ISIIRDRKDKKLWLSQEHYIQNVLQRFHMENVKAVSTPLAAHFKLSVKQCPSNEVEKINM 303

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
            S VPY+ AVGSLMYAMVCTRPDIAHAVGTVSRFLSNPG+EHW AVKWILRYL+GTS + L
Sbjct: 304  SRVPYAYAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGREHWNAVKWILRYLRGTSGLKL 363

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
             +GG  P L GY+D+DMAGD+DSRKSTSG+L  FAGG V+WQSRLQKCVALSTTEAE+IA
Sbjct: 364  YFGGDKPTLVGYSDSDMAGDIDSRKSTSGYLVKFAGGVVAWQSRLQKCVALSTTEAEFIA 423


>gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  615 bits (1585), Expect = 0.0
 Identities = 290/420 (69%), Positives = 362/420 (86%), Gaps = 1/420 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            ++GEP+S++EA+    KE+W +AMQ+EM+SL +NHTYE+VELPKG++AL+NKWV+++K +
Sbjct: 782  DEGEPQSYKEAIKDIHKEEWRKAMQEEMQSLHENHTYELVELPKGRRALKNKWVYRIKTE 841

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
             +    ++KARLVVKGF Q+KGIDF+EIFSPVVKM+SIRVILG+ A+ +LE+EQ+DVKT+
Sbjct: 842  DNNTKPRYKARLVVKGFGQEKGIDFEEIFSPVVKMSSIRVILGIAATQDLEIEQLDVKTA 901

Query: 362  FLHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHGDL+EEIYMEQPEGF++ G +NLVC+L KSLYGLKQAPRQWY KF+S M    +KKT
Sbjct: 902  FLHGDLEEEIYMEQPEGFKVPGKENLVCRLTKSLYGLKQAPRQWYKKFESFMAEHEFKKT 961

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
             +D CV+I+++A G+F+ LLLYVDD+LI G+D  KI+ LKK+LSKSF MKDLGPA+QILG
Sbjct: 962  ESDHCVFIKRYASGDFLILLLYVDDMLIFGQDRIKIAALKKDLSKSFAMKDLGPAKQILG 1021

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            M+I RDR  R LWLSQE+YIE+VLE+FNM+  KPV+ PLA HF+LS    P+S+ E+ EM
Sbjct: 1022 MRITRDRSKRLLWLSQERYIEKVLEQFNMDKCKPVNTPLAGHFRLSSKQSPTSEREMEEM 1081

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
              +PYSS VGSLMYAM+CTRPDIA+AVG VSRFL++PG EHW AVKWILRYL+GTSK CL
Sbjct: 1082 KKIPYSSVVGSLMYAMICTRPDIAYAVGVVSRFLADPGNEHWLAVKWILRYLRGTSKRCL 1141

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
            C+G   PVL+GYTDAD+AGD+DSRKSTSG+L TFAGGAVSWQS+LQKCVALSTTEAEYIA
Sbjct: 1142 CFGKGKPVLQGYTDADLAGDIDSRKSTSGYLTTFAGGAVSWQSKLQKCVALSTTEAEYIA 1201


>gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  615 bits (1585), Expect = 0.0
 Identities = 290/420 (69%), Positives = 362/420 (86%), Gaps = 1/420 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            ++GEP+S++EA+    KE+W +AMQ+EM+SL +NHTYE+VELPKG++AL+NKWV+++K +
Sbjct: 782  DEGEPQSYKEAIKDIHKEEWRKAMQEEMQSLHENHTYELVELPKGRRALKNKWVYRIKTE 841

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
             +    ++KARLVVKGF Q+KGIDF+EIFSPVVKM+SIRVILG+ A+ +LE+EQ+DVKT+
Sbjct: 842  DNNTKPRYKARLVVKGFGQEKGIDFEEIFSPVVKMSSIRVILGIAATQDLEIEQLDVKTA 901

Query: 362  FLHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHGDL+EEIYMEQPEGF++ G +NLVC+L KSLYGLKQAPRQWY KF+S M    +KKT
Sbjct: 902  FLHGDLEEEIYMEQPEGFKVPGKENLVCRLTKSLYGLKQAPRQWYKKFESFMAEHEFKKT 961

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
             +D CV+I+++A G+F+ LLLYVDD+LI G+D  KI+ LKK+LSKSF MKDLGPA+QILG
Sbjct: 962  ESDHCVFIKRYASGDFLILLLYVDDMLIFGQDRIKIAALKKDLSKSFAMKDLGPAKQILG 1021

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            M+I RDR  R LWLSQE+YIE+VLE+FNM+  KPV+ PLA HF+LS    P+S+ E+ EM
Sbjct: 1022 MRITRDRSKRLLWLSQERYIEKVLEQFNMDKCKPVNTPLAGHFRLSSKQSPTSEREMEEM 1081

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
              +PYSS VGSLMYAM+CTRPDIA+AVG VSRFL++PG EHW AVKWILRYL+GTSK CL
Sbjct: 1082 KKIPYSSVVGSLMYAMICTRPDIAYAVGVVSRFLADPGNEHWLAVKWILRYLRGTSKRCL 1141

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
            C+G   PVL+GYTDAD+AGD+DSRKSTSG+L TFAGGAVSWQS+LQKCVALSTTEAEYIA
Sbjct: 1142 CFGKGKPVLQGYTDADLAGDIDSRKSTSGYLTTFAGGAVSWQSKLQKCVALSTTEAEYIA 1201


>gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1314

 Score =  614 bits (1583), Expect = 0.0
 Identities = 296/420 (70%), Positives = 359/420 (85%), Gaps = 1/420 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            ++GEP+SF EA+   DKEKWLQAM++E++SL++N TYE+VELP+G+KAL+NKWVFKLK +
Sbjct: 792  DEGEPQSFIEAIEMNDKEKWLQAMEEELQSLKENETYELVELPQGRKALKNKWVFKLKTE 851

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
             +    ++KAR+VVKG  QKKGIDF+EIFSPVVKMTSIR ILGL A ++LE+EQ+DVKT+
Sbjct: 852  ENNTKPRYKARIVVKGCNQKKGIDFEEIFSPVVKMTSIRAILGLAAKLDLEIEQLDVKTA 911

Query: 362  FLHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHGDL+EEIYMEQPEGF   G ++LVC+LKKSLYGLKQAPRQWY KFD  M    +KKT
Sbjct: 912  FLHGDLEEEIYMEQPEGFAEPGKEHLVCRLKKSLYGLKQAPRQWYKKFDLFMAQHNFKKT 971

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
            +AD+CV+++ + +G  + LLLYVDD+LIVGKD TKI+ LKK LSKSF MKDLG  ++ILG
Sbjct: 972  SADQCVFVKNYENGESIILLLYVDDMLIVGKDKTKIAALKKALSKSFAMKDLGSVKKILG 1031

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            M+I+RDR  R LW+SQE YI++VLERFNM+NAK V +PL  H KLSK  CP ++E+  EM
Sbjct: 1032 MKIIRDRSKRMLWMSQEDYIKKVLERFNMHNAKSVHVPLPGHLKLSKKQCPVNEEK-EEM 1090

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
            S VPYSSAVGSLMYAMVCTRPDIA+AVG VSRFLSNPGKEHW AVKWILRYLKGT+K CL
Sbjct: 1091 SKVPYSSAVGSLMYAMVCTRPDIAYAVGVVSRFLSNPGKEHWNAVKWILRYLKGTAKSCL 1150

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
            C+G  + +L GY+DADMAGD+DSRKSTSG+L TFAGGA+SWQSRLQKC+ALSTTEAE+IA
Sbjct: 1151 CFGNGNLMLTGYSDADMAGDVDSRKSTSGYLITFAGGAISWQSRLQKCIALSTTEAEFIA 1210


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  617 bits (1590), Expect = 0.0
 Identities = 291/420 (69%), Positives = 359/420 (85%), Gaps = 1/420 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            + GEPES++EA+    K +W +AMQ+EM SL  N T+E+V+ PK +KAL+N+WV+++K +
Sbjct: 805  DGGEPESYEEAMESDQKRQWFEAMQEEMNSLYVNDTFELVKAPKNRKALKNRWVYRVKHE 864

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
                V + KARLVVKGF QKKGIDFDEIFSPVVK +SIRV+LGL A +++E+EQMDVKT+
Sbjct: 865  EGTSVPRFKARLVVKGFSQKKGIDFDEIFSPVVKFSSIRVVLGLAARLDIEIEQMDVKTA 924

Query: 362  FLHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHGDL EEIYMEQPEGF++ G ++ VC+LKKSLYGLKQAPRQWY KF S M   GYKKT
Sbjct: 925  FLHGDLDEEIYMEQPEGFKVKGKEDYVCRLKKSLYGLKQAPRQWYKKFTSVMSKHGYKKT 984

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
            ++D CV++ +++D +FV LLLYVDD+LIVG++ ++I +LK+ELSKSF MKD+GPA+QILG
Sbjct: 985  SSDHCVFVNRYSDDDFVILLLYVDDMLIVGRNASRIQELKQELSKSFSMKDMGPAKQILG 1044

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            M+I+RDR+N++LWLSQEKYIE+VLERF+MN AKPVS PL  HFKL K  CPSS++E  EM
Sbjct: 1045 MKIIRDRQNKKLWLSQEKYIEKVLERFHMNEAKPVSTPLDMHFKLCKKQCPSSEKEKEEM 1104

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
              VPYSSAVGSLMYAMVCTRPDIAHAVG VSRFLSNPG+EHW+AVKWILRYL+GTS + L
Sbjct: 1105 QRVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGREHWDAVKWILRYLRGTSSLSL 1164

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
            C+G   P+L GYTD+DMAGD+D+RKSTSG+L T+AGGAVSWQSRLQKCV LSTTEAE+IA
Sbjct: 1165 CFGTGKPILTGYTDSDMAGDIDTRKSTSGYLITYAGGAVSWQSRLQKCVDLSTTEAEFIA 1224


>gb|KYP63120.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 501

 Score =  585 bits (1508), Expect = 0.0
 Identities = 278/397 (70%), Positives = 341/397 (85%), Gaps = 1/397 (0%)
 Frame = +2

Query: 71   MQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKDGSGKVVKHKARLVVKGFQQKKGI 250
            MQ+EM+SL +NHTYE+VELPKG++AL+NKWV+++K + +    ++KARLVVKGF Q+KGI
Sbjct: 1    MQEEMQSLHENHTYELVELPKGRRALKNKWVYRIKTEDNNTKPRYKARLVVKGFSQEKGI 60

Query: 251  DFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTSFLHGDLKEEIYMEQPEGFEISG- 427
            DF++IFSPVVKM+SIRVILG+ A+ +LE+EQ+DVKT+FLHGDL+EEI MEQPEGF++ G 
Sbjct: 61   DFEKIFSPVVKMSSIRVILGIAATQDLEIEQLDVKTAFLHGDLEEEICMEQPEGFKVPGK 120

Query: 428  DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKTNADECVYIQKFADGNFVALLLYV 607
             NLVC+L KSLYGLKQAPRQWY KF+  M    +K+T +D CV+I+++A G+F+ LLLYV
Sbjct: 121  QNLVCRLTKSLYGLKQAPRQWYKKFEFFMAEHEFKRTESDHCVFIKRYASGDFLILLLYV 180

Query: 608  DDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILGMQIVRDRKNRRLWLSQEKYIERV 787
            DD+LIVG+D  KI+ LKK+LSKSF MKDLGPA+QILGM+I RDR  R LWLSQE+YIE+V
Sbjct: 181  DDMLIVGQDRIKIAALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLWLSQERYIEKV 240

Query: 788  LERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEMSSVPYSSAVGSLMYAMVCTRPDI 967
            LE+FNM+  KPV+ PLA HF+LS    P+S+ E+ EM  +PYSS VGSLMYAM+CTRPDI
Sbjct: 241  LEQFNMDKCKPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDI 300

Query: 968  AHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICLCYGGADPVLEGYTDADMAGDLDS 1147
            A+AVG VSRFL+NPG EHW AVKWILRYL+GTSK CLC+G   PVLEGYTDAD+AGD+DS
Sbjct: 301  AYAVGVVSRFLANPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLEGYTDADLAGDIDS 360

Query: 1148 RKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
            RKSTSG+L TF GGAVSWQS+LQKCVALSTTEAEYIA
Sbjct: 361  RKSTSGYLTTFVGGAVSWQSKLQKCVALSTTEAEYIA 397


>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score =  596 bits (1536), Expect = 0.0
 Identities = 278/420 (66%), Positives = 360/420 (85%), Gaps = 1/420 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            ++GEPE + EA+  ++K+KWL AMQDEM+SL  NHT+++V+LPK KKAL N+W++++K++
Sbjct: 751  DEGEPECYLEAMESEEKKKWLDAMQDEMKSLHDNHTFDLVKLPKDKKALENRWIYRVKQE 810

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
             +    ++KARLVVKGF+Q+KGIDF+EIFSPVVKM+SIR++L L A+++LE+EQMDVKT+
Sbjct: 811  SNSTSPRYKARLVVKGFRQRKGIDFNEIFSPVVKMSSIRIVLSLAATLDLEVEQMDVKTA 870

Query: 362  FLHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHGDL+EEIYM+QP+GF + G ++ VC+L+KSLYGLKQAPRQWY KF+S M  QGYKKT
Sbjct: 871  FLHGDLEEEIYMKQPDGFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKT 930

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
             +D CV+++KFA+ +F+ LLLYVDDILIVGKD + I++LKK+LS+SF MKD+G A+QILG
Sbjct: 931  TSDHCVFVKKFANDDFIILLLYVDDILIVGKDISMINRLKKQLSESFAMKDMGAAKQILG 990

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            ++I+RDR+ ++LWLSQE Y++RVL+RF M NAK VS PLA HFKLS    PS + E  +M
Sbjct: 991  IRIMRDRQEKKLWLSQENYVKRVLQRFQMENAKVVSTPLATHFKLSTKQSPSYEYEKSDM 1050

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
              +PY+SAVGSLMYAMVCTRPDIAH VGTVSRF+SNPG+EHW AVKWILRYL+GT+ + L
Sbjct: 1051 QRIPYASAVGSLMYAMVCTRPDIAHVVGTVSRFMSNPGREHWNAVKWILRYLRGTTCLRL 1110

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
            C+GG  P L GYTD+DM GD+DSR+STSG++  FAGGAV+WQSRLQKCVALSTTEAE+IA
Sbjct: 1111 CFGGDKPTLVGYTDSDMGGDIDSRRSTSGYVIKFAGGAVAWQSRLQKCVALSTTEAEFIA 1170


>gb|KYP42630.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 701

 Score =  559 bits (1441), Expect = 0.0
 Identities = 266/420 (63%), Positives = 345/420 (82%), Gaps = 1/420 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            + GEPE F+EA+  + K++WL AMQDEM+SL  NHTY++V+LPKGK+AL N+W+F++K++
Sbjct: 231  DGGEPECFEEALESEKKQRWLDAMQDEMKSLHDNHTYDLVKLPKGKRALENRWIFRVKQE 290

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
             +    ++KARLVVKGF+Q+  +DF+EIFSPVVKM+SIR +L LVA+++LE+EQMDVKT+
Sbjct: 291  SNSTSPRYKARLVVKGFRQRNDVDFNEIFSPVVKMSSIRTVLSLVATLDLEVEQMDVKTA 350

Query: 362  FLHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHG+L+EEIYM+QP+GF + G ++ VC+L+KSLYGLKQAPRQWY KF+S M  QGYKKT
Sbjct: 351  FLHGNLEEEIYMKQPDGFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESFMCEQGYKKT 410

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
             +D CV+++KF+D +F+ LLLYVDD+LIV KD ++I +LKK+L ++F MKDLG A++ILG
Sbjct: 411  TSDHCVFVKKFSDDDFIILLLYVDDMLIVEKDVSRIDRLKKQLGEAFAMKDLGAAKKILG 470

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            + I    K ++LWLSQE YI++VL+RF M N+K V  PLA HFKLS    PS++ E   M
Sbjct: 471  ISI----KEKKLWLSQEHYIKKVLQRFQMENSKVVGTPLAAHFKLSVKQSPSNEAEKTYM 526

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
            S VPY  AVGSLMY MVCTRPD+A+ VGTVSRFLSNP +EHW AVKWILRYL GTS + L
Sbjct: 527  SKVPYVYAVGSLMYPMVCTRPDVAYVVGTVSRFLSNPSREHWNAVKWILRYLHGTSGLRL 586

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
            C+GG  P L GY+++DMAGD+DSRKSTSG+L  FAGG V+WQSRLQ+CV LSTTEAE+IA
Sbjct: 587  CFGGDKPTLVGYSNSDMAGDVDSRKSTSGYLINFAGGVVAWQSRLQRCVTLSTTEAEFIA 646


>gb|OMO51796.1| Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
            capsularis]
          Length = 1500

 Score =  583 bits (1502), Expect = 0.0
 Identities = 283/400 (70%), Positives = 346/400 (86%), Gaps = 1/400 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            +DGEPESF++  S  DK++WL+AMQ+EM+SLQKN TYE+VELPKGK+ L+NKWVFKLKKD
Sbjct: 902  DDGEPESFRDVQSTSDKQRWLEAMQEEMDSLQKNGTYELVELPKGKRPLKNKWVFKLKKD 961

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
            G+ K+V++K  LVVKGF QK  IDFDEIFSPVVKM+SIRV+LGL AS+NLE+EQ+DVKT+
Sbjct: 962  GN-KLVRYKTCLVVKGFAQKACIDFDEIFSPVVKMSSIRVVLGLAASLNLEIEQLDVKTA 1020

Query: 362  FLHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHGDL+EEIYM+QPEGF++ G +++VC+LKKSLYGLKQA RQWY KFDS MVS  +K+T
Sbjct: 1021 FLHGDLQEEIYMDQPEGFKVKGKEHMVCRLKKSLYGLKQALRQWYKKFDSFMVSHLFKRT 1080

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
              D CVY + F + NF+ LLLYVDD+LIVG+D   IS+LK +LS+SFDMKDLGPA+QILG
Sbjct: 1081 ATDPCVYFRSFGN-NFIILLLYVDDMLIVGQDVELISKLKDDLSRSFDMKDLGPAKQILG 1139

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            M I+RDRK  +LWLSQEKY+ER+L+RFNM +AK VS PLANHFKL+K +CP S+++  EM
Sbjct: 1140 MDIIRDRKAGKLWLSQEKYVERILKRFNMQDAKSVSTPLANHFKLTKKSCPVSEKKKDEM 1199

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
            + + YSS VGSLMY MVCTRPDIAHAVG +SRFLSNPGK HWEAVKWI RYL+GTSK+CL
Sbjct: 1200 AVILYSSVVGSLMYLMVCTRPDIAHAVGVMSRFLSNPGKVHWEAVKWIFRYLRGTSKMCL 1259

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVS 1198
             +  +  +LEG+TDADMAGDLDSRKSTSG+++TFAGGAVS
Sbjct: 1260 SFETSQTILEGFTDADMAGDLDSRKSTSGYIFTFAGGAVS 1299


>ref|XP_017609491.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Gossypium arboreum]
          Length = 1184

 Score =  573 bits (1476), Expect = 0.0
 Identities = 268/420 (63%), Positives = 355/420 (84%), Gaps = 1/420 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            + GEP  ++EA+  + K++W++AM+D+++SL +NHT+E+V+LPKGK+AL+N+WV++LK++
Sbjct: 661  DGGEPGCYEEAMESECKDQWVEAMKDKLQSLHENHTFELVKLPKGKRALKNRWVYRLKQE 720

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
                  ++KARLVVKG+ QKKG+DF+EIFSPVVKM+SIR IL L A  +LE+EQMDVK +
Sbjct: 721  EKSSSPRYKARLVVKGYTQKKGVDFEEIFSPVVKMSSIRTILSLAACYDLEVEQMDVKIA 780

Query: 362  FLHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHGDL++E+YMEQPEGF     ++ VC+LKKSLYGLKQAPRQWY KF+S M  Q YKKT
Sbjct: 781  FLHGDLEDELYMEQPEGFVAQRKEDYVCRLKKSLYGLKQAPRQWYKKFESVMGEQSYKKT 840

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
             +D CV+++KF+  +F+ LLLYVDD+LIVG++ ++I +LK+ELSKSF MKDLGPA+QILG
Sbjct: 841  TSDHCVFVKKFSGDDFIILLLYVDDMLIVGQNASRIEKLKQELSKSFAMKDLGPAKQILG 900

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            +++ RDRK ++LWLSQE+YIE+VL++F+M+ AK V+ P A HF+LS    PS+++E  EM
Sbjct: 901  IRLTRDRKAKKLWLSQERYIEKVLQKFSMDKAKAVNTPFAMHFRLSVKHSPSTEKEKEEM 960

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
              +PYSSAVGSLMYAMVCTRPD+A+AVGTVSRFLSN G+EHW AVKWI+RYL+GTS + L
Sbjct: 961  QKIPYSSAVGSLMYAMVCTRPDLAYAVGTVSRFLSNLGREHWNAVKWIMRYLRGTSNMKL 1020

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
            C+G   PV  GYTD+DMAGD+DSR+STSG+L T+AGGAV+WQSR QKCVALSTTE+E+IA
Sbjct: 1021 CFGNEKPVTVGYTDSDMAGDIDSRRSTSGYLITYAGGAVAWQSRQQKCVALSTTESEFIA 1080


>ref|XP_013746494.2| uncharacterized protein BNAC09G10640D [Brassica napus]
          Length = 1347

 Score =  577 bits (1487), Expect = 0.0
 Identities = 275/420 (65%), Positives = 350/420 (83%), Gaps = 1/420 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            + GEPES+ EA+  + K+KW  AM +EM+S ++NHT+E+VELPKGKKAL NKWV+++K +
Sbjct: 824  DGGEPESYDEALEDEHKDKWFGAMDEEMDSFEENHTFELVELPKGKKALLNKWVYRIKHE 883

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
                  +HKARLVVKG+ QKKGID+DEIFSPVVKM+SIRV+LGL AS++LE+EQMDVKT+
Sbjct: 884  DDNLPPRHKARLVVKGYSQKKGIDYDEIFSPVVKMSSIRVVLGLAASLDLEVEQMDVKTA 943

Query: 362  FLHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHGDL+EEIYMEQPEG+   G +NLVC+LKKSLYGLKQAPRQWY KF S M   GY +T
Sbjct: 944  FLHGDLEEEIYMEQPEGYVQKGKENLVCRLKKSLYGLKQAPRQWYMKFKSVMGEHGYAET 1003

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
            ++D CV+++ F + +F+ LLLYVDD+LIVG++  +I +LK++LS+SF MKD+GPA+QILG
Sbjct: 1004 DSDHCVFVKVFGEDDFIILLLYVDDMLIVGRNMDRIKELKEQLSESFAMKDMGPAKQILG 1063

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            M+I+RDR  + + LSQEKYIE+VL+RF+M+ +K +S PLA H +LS    P +  E  +M
Sbjct: 1064 MRIIRDRGEKLIHLSQEKYIEKVLKRFHMDKSKVLSTPLAPHLRLSSQQSPKTYAEKEDM 1123

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
            + VPY+SAVGSLMYAMVCTRPD+A+AVG VSRFLSNPG+EHW AVKWILRYL+GTS + +
Sbjct: 1124 AKVPYASAVGSLMYAMVCTRPDLAYAVGVVSRFLSNPGREHWNAVKWILRYLRGTSNLKI 1183

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
             +GG  P+L  YTD+DM+GD DS KSTSG+L TFAGGAV+WQSRLQKCVALSTTEAE+IA
Sbjct: 1184 TFGGKKPLLVSYTDSDMSGDADSSKSTSGYLVTFAGGAVAWQSRLQKCVALSTTEAEFIA 1243


>gb|PNX95528.1| putative gag/pol polyprotein [Trifolium pratense]
          Length = 1339

 Score =  576 bits (1484), Expect = 0.0
 Identities = 273/420 (65%), Positives = 354/420 (84%), Gaps = 1/420 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            + GEPE+F+E +  ++K++W+ AM+DEM+SL++N+T+E+V+LPKGK+AL+N+WV+++K+D
Sbjct: 816  DGGEPENFKEVLEDENKKEWMDAMEDEMQSLRENNTFELVKLPKGKRALKNRWVYRIKQD 875

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
                  ++KARLVVKGF+Q++GIDF EIF+PVVKM SIR++LGL AS++LE+E+MDVKT+
Sbjct: 876  ECTSQRRYKARLVVKGFKQREGIDFGEIFAPVVKMQSIRMVLGLAASLDLEVEKMDVKTT 935

Query: 362  FLHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHGDL EEIYMEQP+GF   G ++ VCKL KSLYGLKQAPRQWY KF+S M+  GYK T
Sbjct: 936  FLHGDLHEEIYMEQPDGFREKGKEDYVCKLVKSLYGLKQAPRQWYQKFNSVMIEHGYKMT 995

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
             AD CV+ +  ++ +F+ LLLYVDD+LIVGK+ ++I +LK  LS+SF MKDLG A++ILG
Sbjct: 996  KADHCVFFRNLSEDDFIILLLYVDDMLIVGKNISRIRELKNTLSESFSMKDLGAARKILG 1055

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            ++IVRDR  ++L+LSQEKY+E+VL RF+M+ AK VSIPLA+HFKLS   CPS+ EE   M
Sbjct: 1056 IEIVRDRNEKKLYLSQEKYVEKVLRRFSMDKAKAVSIPLASHFKLSHKLCPSTDEEKLRM 1115

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
             S+PYSSAVGSLMYAMVCTRPDIAHAVG VSR+LSNPGK HWEAVKW++RYL+G+S + L
Sbjct: 1116 KSIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGKVHWEAVKWVMRYLRGSSNLKL 1175

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
              G   P+L GYTD+D+AG LD RKSTSG + TFAGGAV+WQS+LQKCVALSTTEAE+IA
Sbjct: 1176 TLGCKKPMLVGYTDSDLAGSLDDRKSTSGXMVTFAGGAVAWQSKLQKCVALSTTEAEFIA 1235


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  567 bits (1462), Expect = 0.0
 Identities = 281/420 (66%), Positives = 352/420 (83%), Gaps = 2/420 (0%)
 Frame = +2

Query: 5    DGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKDG 184
            +GEPE+ +E +SH +K +W++AM +EM SLQKN TY++VELPKGK+ L+ KWVFKLKKDG
Sbjct: 809  EGEPENLKEVLSHPEKSQWMKAMHEEMGSLQKNGTYQLVELPKGKRPLKCKWVFKLKKDG 868

Query: 185  SGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTSF 364
            +GK+V++KARLVVKGF+QKKGIDFDEIFSPVVKMTSIR IL + AS++LE+EQ+DVKT+F
Sbjct: 869  NGKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSIAASLDLEVEQLDVKTAF 928

Query: 365  LHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKTN 541
            LHGDL+EEIYMEQ EGFE+SG  ++VCKL KSLYGLKQAPRQWY KFDS M SQ Y+ T 
Sbjct: 929  LHGDLEEEIYMEQGEGFEVSGKKHMVCKLNKSLYGLKQAPRQWYKKFDSFMKSQTYRNTY 988

Query: 542  ADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILGM 721
            +  CVY ++F+D NF+ LLLY D +LIVGKD   I++L+K+ SKSFDMKDLGPA+QILGM
Sbjct: 989  SHPCVYFKRFSDKNFIILLLYTDYMLIVGKDKELIAKLRKDFSKSFDMKDLGPAKQILGM 1048

Query: 722  QIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKE-EIGEM 898
            +I R+ + ++L LS EKYIERVLERFNM +AKP+S PL ++ KL+K   P+ K+ E G+M
Sbjct: 1049 KIARE-EQKKLGLSHEKYIERVLERFNMKSAKPISTPLVSYLKLTKQMFPTKKKGEKGDM 1107

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
            + VPYSSAVGS MYAMVCTRP+I  AV  VSRFL  PGKEH EAVKWILRYL+ T++   
Sbjct: 1108 AKVPYSSAVGSFMYAMVCTRPNIV-AVCVVSRFLEIPGKEHLEAVKWILRYLRRTTRDYF 1166

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
            C+ G+DP+ +GYT+ DM GDLD+RKST+ +L+TF+GG +SWQS+LQK VALSTTEA+YIA
Sbjct: 1167 CFEGSDPISKGYTNVDMEGDLDNRKSTTCYLFTFSGGDISWQSKLQKYVALSTTEAKYIA 1226


>emb|CAN71038.1| hypothetical protein VITISV_011062 [Vitis vinifera]
          Length = 646

 Score =  541 bits (1393), Expect = 0.0
 Identities = 264/420 (62%), Positives = 329/420 (78%), Gaps = 1/420 (0%)
 Frame = +2

Query: 2    EDGEPESFQEAVSHKDKEKWLQAMQDEMESLQKNHTYEIVELPKGKKALRNKWVFKLKKD 181
            + GEPE + EA+  ++  KW  AM DEM+SL  N T+E+ ELP GKKAL NKWV+K+K +
Sbjct: 220  DGGEPECYDEALQDENSSKWELAMNDEMDSLLGNQTWELTELPVGKKALHNKWVYKIKNE 279

Query: 182  GSGKVVKHKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGLVASMNLELEQMDVKTS 361
                  ++KARLVVKGFQQK+GID+ EIFSPVVKM++IR++LG+VA+ NL LEQ+DVKT+
Sbjct: 280  HDDSK-RYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTA 338

Query: 362  FLHGDLKEEIYMEQPEGFEISG-DNLVCKLKKSLYGLKQAPRQWYTKFDSCMVSQGYKKT 538
            FLHGDL+E++YM Q EGF + G +NLV KL+KSLYGLKQAPRQWY KFD+ M   G+K+ 
Sbjct: 339  FLHGDLEEDLYMIQSEGFIVQGQENLVYKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRC 398

Query: 539  NADECVYIQKFADGNFVALLLYVDDILIVGKDTTKISQLKKELSKSFDMKDLGPAQQILG 718
             AD C Y++ F D +++ LLLYVDD+LI G D  KI+ LK +LSK F MKDLG A+QILG
Sbjct: 399  EADHCCYVKSF-DNSYIILLLYVDDMLIAGSDIEKINNLKNQLSKQFAMKDLGAAKQILG 457

Query: 719  MQIVRDRKNRRLWLSQEKYIERVLERFNMNNAKPVSIPLANHFKLSKSACPSSKEEIGEM 898
            M+I+RD+ N  L LSQ +Y++++L RFNMN AKPVS PL +HFKLSK     ++EE   M
Sbjct: 458  MRIIRDKANGTLKLSQSEYVKKILSRFNMNEAKPVSTPLGSHFKLSKEQSSKTEEERDHM 517

Query: 899  SSVPYSSAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGKEHWEAVKWILRYLKGTSKICL 1078
            S VPY+SA+GSLMYAMVCTRPDIAHAVG VSRF+S PGK+HWEAVKWILRYLKG+   CL
Sbjct: 518  SKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCL 577

Query: 1079 CYGGADPVLEGYTDADMAGDLDSRKSTSGFLYTFAGGAVSWQSRLQKCVALSTTEAEYIA 1258
            C+ GA   L+GY DAD AGD+DSRKST+GF++T  G  +SW S LQK V LSTTEAEY+A
Sbjct: 578  CFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTGISWTSNLQKIVTLSTTEAEYVA 637