BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00025172
         (532 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012830394.1| PREDICTED: splicing factor U2af large subuni...   136   2e-34
ref|XP_011086108.1| splicing factor U2af large subunit A-like is...   108   2e-24
gb|PIM98807.1| Splicing factor U2AF, large subunit (RRM superfam...   107   6e-24
ref|XP_022845682.1| splicing factor U2af large subunit B-like is...    68   6e-10
ref|XP_022845681.1| splicing factor U2af large subunit B-like is...    68   6e-10
ref|XP_009773963.1| PREDICTED: splicing factor U2af large subuni...    66   2e-09
ref|XP_009773962.1| PREDICTED: splicing factor U2af large subuni...    66   2e-09
ref|XP_016489101.1| PREDICTED: splicing factor U2af large subuni...    66   3e-09
ref|XP_016489100.1| PREDICTED: splicing factor U2af large subuni...    66   3e-09
ref|XP_016489102.1| PREDICTED: splicing factor U2af large subuni...    61   1e-07
ref|XP_006347063.1| PREDICTED: splicing factor U2af large subuni...    61   1e-07
ref|XP_016438902.1| PREDICTED: splicing factor U2af large subuni...    59   3e-07
ref|XP_009608683.1| PREDICTED: splicing factor U2af large subuni...    59   5e-07
ref|XP_019266811.1| PREDICTED: splicing factor U2af large subuni...    59   5e-07
ref|XP_009608682.1| PREDICTED: splicing factor U2af large subuni...    59   5e-07
ref|XP_017190792.1| PREDICTED: splicing factor U2af large subuni...    56   5e-06
ref|XP_008383770.1| PREDICTED: splicing factor U2af large subuni...    56   5e-06
ref|XP_008383769.1| PREDICTED: splicing factor U2af large subuni...    56   5e-06
ref|XP_018848314.1| PREDICTED: splicing factor U2af large subuni...    56   5e-06

>ref|XP_012830394.1| PREDICTED: splicing factor U2af large subunit A-like isoform X1
           [Erythranthe guttata]
          Length = 529

 Score =  136 bits (343), Expect = 2e-34
 Identities = 65/92 (70%), Positives = 73/92 (79%)
 Frame = -1

Query: 277 FNRREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQ 98
           F R+E N NEEKHQY+ QD QT+ RYYG RS N+DYG+R NQESSR  KH  DREKQY+Q
Sbjct: 39  FKRKESNQNEEKHQYQKQDGQTSERYYGGRSKNEDYGSRRNQESSRSYKHSEDREKQYKQ 98

Query: 97  RSPSRSDDKSISKRTSGFDVAPPVAGAFSNPS 2
           RSPSRSDD+  SKRTSGFDVAPP A +  NPS
Sbjct: 99  RSPSRSDDRYQSKRTSGFDVAPPAASSLPNPS 130


>ref|XP_011086108.1| splicing factor U2af large subunit A-like isoform X1 [Sesamum
           indicum]
          Length = 538

 Score =  108 bits (271), Expect = 2e-24
 Identities = 57/106 (53%), Positives = 68/106 (64%), Gaps = 14/106 (13%)
 Frame = -1

Query: 277 FNRREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQ 98
           F R EWN N EKH+Y+++   T+ R+Y  R+ NDDYG+R NQE SR  KH G REKQY+ 
Sbjct: 39  FKRNEWNQNGEKHRYQDR---TSMRHYAGRNQNDDYGSRRNQEFSRQYKHDGHREKQYKH 95

Query: 97  RSPSRSDDKS--------------ISKRTSGFDVAPPVAGAFSNPS 2
           RSPSRSDDKS               SKRTSGFDVAPP+  A  + S
Sbjct: 96  RSPSRSDDKSHGEVTSMSNSPPPGKSKRTSGFDVAPPIGAALPDSS 141


>gb|PIM98807.1| Splicing factor U2AF, large subunit (RRM superfamily) [Handroanthus
           impetiginosus]
          Length = 541

 Score =  107 bits (268), Expect = 6e-24
 Identities = 56/106 (52%), Positives = 70/106 (66%), Gaps = 14/106 (13%)
 Frame = -1

Query: 277 FNRREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQ 98
           F +++W+ + EK+QY+ QD +T  RY+G ++ N+D  NR  QE SRY KHGGDREKQYR+
Sbjct: 38  FKKKDWSQSGEKNQYQRQDGRTTVRYHGGKTKNEDCSNRRIQECSRYYKHGGDREKQYRK 97

Query: 97  RSPSRSDD-------------KSISKRTSGFDVAPPV-AGAFSNPS 2
           RS S SDD             +  SKRTSGFDVAPPV A A  NPS
Sbjct: 98  RSLSESDDEPDRKSTSQSNSPRGKSKRTSGFDVAPPVAAAALPNPS 143


>ref|XP_022845682.1| splicing factor U2af large subunit B-like isoform X2 [Olea europaea
           var. sylvestris]
          Length = 539

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 14/94 (14%)
 Frame = -1

Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
           RREWN +   +   ++D   ++R Y  RS  +D+G   N E  R+  +  DREK +RQRS
Sbjct: 40  RREWNQDRTNY---SRDHGNSSRNYRGRSKYEDHGRPRNYEFGRHHNYDKDREKHHRQRS 96

Query: 91  PSRSDDKS--------------ISKRTSGFDVAP 32
           PSRSDD+S               SKRT+GFD+AP
Sbjct: 97  PSRSDDESHKQSRSLSNSPSRPRSKRTTGFDMAP 130


>ref|XP_022845681.1| splicing factor U2af large subunit B-like isoform X1 [Olea europaea
           var. sylvestris]
          Length = 540

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 14/94 (14%)
 Frame = -1

Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
           RREWN +   +   ++D   ++R Y  RS  +D+G   N E  R+  +  DREK +RQRS
Sbjct: 40  RREWNQDRTNY---SRDHGNSSRNYRGRSKYEDHGRPRNYEFGRHHNYDKDREKHHRQRS 96

Query: 91  PSRSDDKS--------------ISKRTSGFDVAP 32
           PSRSDD+S               SKRT+GFD+AP
Sbjct: 97  PSRSDDESHKQSRSLSNSPSRPRSKRTTGFDMAP 130


>ref|XP_009773963.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
           [Nicotiana sylvestris]
          Length = 539

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
 Frame = -1

Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
           R +++ +E++H  E +D  +    Y R  +NDDY    N +  R  +H G REK   +RS
Sbjct: 40  RDKYSRDEDRHHGEYKDKSSKG--YRRNDDNDDYSRSRNHKFDR-RQHRGGREKDETRRS 96

Query: 91  PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
            SRS D+S               SKRTSGFD+APPVA AFS+
Sbjct: 97  RSRSKDRSYEKARSRSYSPLPPKSKRTSGFDMAPPVAAAFSS 138


>ref|XP_009773962.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
           [Nicotiana sylvestris]
          Length = 540

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
 Frame = -1

Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
           R +++ +E++H  E +D  +    Y R  +NDDY    N +  R  +H G REK   +RS
Sbjct: 40  RDKYSRDEDRHHGEYKDKSSKG--YRRNDDNDDYSRSRNHKFDR-RQHRGGREKDETRRS 96

Query: 91  PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
            SRS D+S               SKRTSGFD+APPVA AFS+
Sbjct: 97  RSRSKDRSYEKARSRSYSPLPPKSKRTSGFDMAPPVAAAFSS 138


>ref|XP_016489101.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
           [Nicotiana tabacum]
          Length = 539

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
 Frame = -1

Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
           R +++ +E++H  E +D  +    Y R  +NDDY    N +  R  +H G REK    RS
Sbjct: 40  RDKYSRDEDRHHGEYKDKSSKG--YRRNDDNDDYSRSRNHKFDR-RQHRGGREKDETHRS 96

Query: 91  PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
            SRS D+S               SKRTSGFD+APPVA AFS+
Sbjct: 97  RSRSKDRSYEKARSRSYSPLPPKSKRTSGFDMAPPVAAAFSS 138


>ref|XP_016489100.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
           [Nicotiana tabacum]
          Length = 540

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
 Frame = -1

Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
           R +++ +E++H  E +D  +    Y R  +NDDY    N +  R  +H G REK    RS
Sbjct: 40  RDKYSRDEDRHHGEYKDKSSKG--YRRNDDNDDYSRSRNHKFDR-RQHRGGREKDETHRS 96

Query: 91  PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
            SRS D+S               SKRTSGFD+APPVA AFS+
Sbjct: 97  RSRSKDRSYEKARSRSYSPLPPKSKRTSGFDMAPPVAAAFSS 138


>ref|XP_016489102.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
           [Nicotiana tabacum]
          Length = 519

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 37/88 (42%), Positives = 50/88 (56%)
 Frame = -1

Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
           R +++ +E++H  E +D  +    Y R  +NDDY    N +  R  +H G REK    RS
Sbjct: 40  RDKYSRDEDRHHGEYKDKSSKG--YRRNDDNDDYSRSRNHKFDR-RQHRGGREKDETHRS 96

Query: 91  PSRSDDKSISKRTSGFDVAPPVAGAFSN 8
            S       SKRTSGFD+APPVA AFS+
Sbjct: 97  RS-------SKRTSGFDMAPPVAAAFSS 117


>ref|XP_006347063.1| PREDICTED: splicing factor U2af large subunit B-like [Solanum
           tuberosum]
          Length = 541

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
 Frame = -1

Query: 253 NEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRSPSRSDD 74
           +++ H++  +    + R Y R  +N+DY    N +  R   HGG REK   +RS SRS D
Sbjct: 46  DQDHHRHREEYKDKSTRSYRRNDDNEDYSRSRNHKFDRRQDHGG-REKGETRRSRSRSKD 104

Query: 73  KSI--------------SKRTSGFDVAPPVAGAF 14
            S               SKRTSGFD+APPVA +F
Sbjct: 105 SSHDKARSRSSSPLPPKSKRTSGFDMAPPVAASF 138


>ref|XP_016438902.1| PREDICTED: splicing factor U2af large subunit A-like, partial
           [Nicotiana tabacum]
          Length = 305

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 14/102 (13%)
 Frame = -1

Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
           R +++ ++++H+ E +D   ++R Y R  +NDDY +  N +  R  +H   REK   +RS
Sbjct: 40  RDKYSRDQDRHRGEYKDK--SSRGYRRNDDNDDYSHSRNHKFDR-RQHREGREKGETRRS 96

Query: 91  PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
            SRS D+S               SKRTSGFD+AP VA AFS+
Sbjct: 97  RSRSKDRSYGKARSRSNSPLPPKSKRTSGFDMAPSVATAFSS 138


>ref|XP_009608683.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
           [Nicotiana tomentosiformis]
          Length = 539

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 14/102 (13%)
 Frame = -1

Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
           R +++ ++++H+ E +D   ++R Y R  +NDDY +  N +  R  +H   REK   +RS
Sbjct: 40  RDKYSRDQDRHRGEYKDK--SSRGYRRNDDNDDYSHSRNHKFDR-RQHREGREKGETRRS 96

Query: 91  PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
            SRS D+S               SKRTSGFD+AP VA AFS+
Sbjct: 97  RSRSKDRSYGKARSRSNSPLPPKSKRTSGFDMAPSVATAFSS 138


>ref|XP_019266811.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
           [Nicotiana attenuata]
 gb|OIT05576.1| splicing factor u2af large subunit b [Nicotiana attenuata]
          Length = 540

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 14/102 (13%)
 Frame = -1

Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
           R +++ ++++H+ E +D   ++R Y R  +NDDY    N +  R  +H   REK   +RS
Sbjct: 40  RDKYSRDQDRHREEYKDK--SSRGYRRNDDNDDYSPSRNHKFDR-RQHREGREKGETRRS 96

Query: 91  PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
            SRS D+S               SKRTSGFD+AP VA AFS+
Sbjct: 97  HSRSKDRSYEKARSRSNSPLPPKSKRTSGFDMAPSVAAAFSS 138


>ref|XP_009608682.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
           [Nicotiana tomentosiformis]
          Length = 540

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 14/102 (13%)
 Frame = -1

Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
           R +++ ++++H+ E +D   ++R Y R  +NDDY +  N +  R  +H   REK   +RS
Sbjct: 40  RDKYSRDQDRHRGEYKDK--SSRGYRRNDDNDDYSHSRNHKFDR-RQHREGREKGETRRS 96

Query: 91  PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
            SRS D+S               SKRTSGFD+AP VA AFS+
Sbjct: 97  RSRSKDRSYGKARSRSNSPLPPKSKRTSGFDMAPSVATAFSS 138


>ref|XP_017190792.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
           [Malus domestica]
          Length = 521

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
 Frame = -1

Query: 238 QYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRSPSRS------- 80
           +Y  Q    + R+   R++ D Y    NQ+  R+  +  DRE+++R RS SRS       
Sbjct: 38  RYTRQYKDRSGRFDRGRNSYDGYRRGRNQDFDRHRDYDQDRERRHRHRSRSRSRSHSRDR 97

Query: 79  ---DDKSISKRTSGFDVAPPVAGAFSNPS 2
                +S SKRTSGFD+APP   A  N S
Sbjct: 98  SPSHSRSKSKRTSGFDMAPPAGSALPNAS 126


>ref|XP_008383770.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
           [Malus domestica]
          Length = 522

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
 Frame = -1

Query: 238 QYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRSPSRS------- 80
           +Y  Q    + R+   R++ D Y    NQ+  R+  +  DRE+++R RS SRS       
Sbjct: 38  RYTRQYKDRSGRFDRGRNSYDGYRRGRNQDFDRHRDYDQDRERRHRHRSRSRSRSHSRDR 97

Query: 79  ---DDKSISKRTSGFDVAPPVAGAFSNPS 2
                +S SKRTSGFD+APP   A  N S
Sbjct: 98  SPSHSRSKSKRTSGFDMAPPAGSALPNAS 126


>ref|XP_008383769.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
           [Malus domestica]
          Length = 526

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
 Frame = -1

Query: 238 QYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRSPSRS------- 80
           +Y  Q    + R+   R++ D Y    NQ+  R+  +  DRE+++R RS SRS       
Sbjct: 38  RYTRQYKDRSGRFDRGRNSYDGYRRGRNQDFDRHRDYDQDRERRHRHRSRSRSRSHSRDR 97

Query: 79  ---DDKSISKRTSGFDVAPPVAGAFSNPS 2
                +S SKRTSGFD+APP   A  N S
Sbjct: 98  SPSHSRSKSKRTSGFDMAPPAGSALPNAS 126


>ref|XP_018848314.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
           [Juglans regia]
          Length = 538

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 22/95 (23%)
 Frame = -1

Query: 247 EKHQYENQDTQTNARYYGRRSNNDD-----YGNRGNQESSRYSKH---GGDREKQYRQRS 92
           +KHQY  +D   + R Y  RS  DD     Y +    +S  Y++H     +RE+++R+RS
Sbjct: 40  DKHQYREKDGDRHHRNYKDRSTKDDNRGGKYDDYDRHQSGHYNRHHYSDRERERRHRRRS 99

Query: 91  PSRSDD--------------KSISKRTSGFDVAPP 29
            SRS D               S SKRTSGFD+APP
Sbjct: 100 RSRSRDGSRNESRSHSRSRSHSESKRTSGFDMAPP 134