BLASTX nr result

ID: Rehmannia30_contig00024999 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00024999
         (422 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011091002.1| RING-H2 finger protein ATL2 [Sesamum indicum]      92   2e-19
gb|PIN12051.1| hypothetical protein CDL12_15340 [Handroanthus im...    85   4e-17
gb|PIN04572.1| Anaphase-promoting complex (APC), subunit 11 [Han...    85   4e-17
ref|XP_012828501.1| PREDICTED: RING-H2 finger protein ATL2-like ...    77   7e-14
ref|XP_022856290.1| RING-H2 finger protein ATL2-like [Olea europ...    67   3e-10
ref|XP_022844790.1| RING-H2 finger protein ATL2-like [Olea europ...    64   4e-09
ref|XP_022029275.1| RING-H2 finger protein ATL2-like [Helianthus...    54   7e-06

>ref|XP_011091002.1| RING-H2 finger protein ATL2 [Sesamum indicum]
          Length = 300

 Score = 91.7 bits (226), Expect = 2e-19
 Identities = 49/68 (72%), Positives = 55/68 (80%), Gaps = 4/68 (5%)
 Frame = -1

Query: 416 VRIEVPPRRAEPENELSQSSPGGRLLSLKRILSMGRRSPA----TTPCGAGTSRVAGEMD 249
           VRI+VPPRRAE ENELSQSSP  RLLSLKRILSMGR+SPA     TPC +GTS  A E+D
Sbjct: 221 VRIDVPPRRAEWENELSQSSPASRLLSLKRILSMGRKSPAGVGPATPCVSGTSSGAAELD 280

Query: 248 LESGISES 225
           +E+GI ES
Sbjct: 281 VENGIGES 288


>gb|PIN12051.1| hypothetical protein CDL12_15340 [Handroanthus impetiginosus]
          Length = 287

 Score = 85.1 bits (209), Expect = 4e-17
 Identities = 47/68 (69%), Positives = 54/68 (79%), Gaps = 5/68 (7%)
 Frame = -1

Query: 416 VRIEV-PPRRAEPENELSQSSPGGRLLSLKRILSMGRRSP----ATTPCGAGTSRVAGEM 252
           VRIEV PPR A  ENEL+QSSPG R  SLKR+LSMG++SP    A+ PCGAGTSRVA E+
Sbjct: 215 VRIEVSPPRLAPLENELTQSSPGTRFASLKRLLSMGKKSPIGSCASPPCGAGTSRVATEL 274

Query: 251 DLESGISE 228
           DLE G+SE
Sbjct: 275 DLEVGVSE 282


>gb|PIN04572.1| Anaphase-promoting complex (APC), subunit 11 [Handroanthus
           impetiginosus]
          Length = 287

 Score = 85.1 bits (209), Expect = 4e-17
 Identities = 47/70 (67%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
 Frame = -1

Query: 422 AGVRIEVPPRRAEPENELSQSSPGGRLLSLKRILSMGRRSPA----TTPCGAGTSRVAGE 255
           AG+RIEVPPRR E    LSQ+SPG R+LS+KRILSMGR+S A     TPCGAGTS    E
Sbjct: 215 AGMRIEVPPRRTE----LSQNSPGSRMLSIKRILSMGRKSTAAGGQVTPCGAGTSLGGTE 270

Query: 254 MDLESGISES 225
           +DLESG+SES
Sbjct: 271 LDLESGLSES 280


>ref|XP_012828501.1| PREDICTED: RING-H2 finger protein ATL2-like [Erythranthe guttata]
 gb|EYU43976.1| hypothetical protein MIMGU_mgv1a011050mg [Erythranthe guttata]
          Length = 294

 Score = 76.6 bits (187), Expect = 7e-14
 Identities = 41/64 (64%), Positives = 49/64 (76%)
 Frame = -1

Query: 416 VRIEVPPRRAEPENELSQSSPGGRLLSLKRILSMGRRSPATTPCGAGTSRVAGEMDLESG 237
           V IEVPPRR E ++EL+Q+SP  R LSLKRILSMGR+SP+    G GTS  A E+DLE G
Sbjct: 224 VTIEVPPRRNESDSELTQNSPASRFLSLKRILSMGRKSPS----GVGTSGGATELDLEGG 279

Query: 236 ISES 225
           +SES
Sbjct: 280 LSES 283


>ref|XP_022856290.1| RING-H2 finger protein ATL2-like [Olea europaea var. sylvestris]
          Length = 292

 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 8/72 (11%)
 Frame = -1

Query: 419 GVRIEVPPRRAEPENELSQSSPG-----GRLLSLKRILSMGRRSPATTPCGAGTSRV--- 264
           GVRI++P  R E + ELS SSPG      RLLS KR+LSM ++SP  TPCG GTS V   
Sbjct: 199 GVRIQIP--RTEFDGELSLSSPGFRSPGTRLLSFKRLLSMNKKSPMGTPCGVGTSCVQLG 256

Query: 263 AGEMDLESGISE 228
           A E+DLESG +E
Sbjct: 257 ATELDLESGSNE 268


>ref|XP_022844790.1| RING-H2 finger protein ATL2-like [Olea europaea var. sylvestris]
          Length = 280

 Score = 63.5 bits (153), Expect = 4e-09
 Identities = 41/71 (57%), Positives = 47/71 (66%), Gaps = 8/71 (11%)
 Frame = -1

Query: 416 VRIEVPPRRAEPENELSQSSPG-----GRLLSLKRILSMGRRSPATTPCGAGTSRV---A 261
           VRIEVP RR + ++EL  SSPG      RLLS+KR LSM R+SP  TPC AGTS     A
Sbjct: 198 VRIEVP-RRTQFDDELPLSSPGLRSPGTRLLSIKRFLSMNRKSPMGTPCAAGTSSEPLGA 256

Query: 260 GEMDLESGISE 228
            E+DLESG  E
Sbjct: 257 TELDLESGRDE 267


>ref|XP_022029275.1| RING-H2 finger protein ATL2-like [Helianthus annuus]
 gb|OTG32211.1| putative zinc finger, RING/FYVE/PHD-type [Helianthus annuus]
          Length = 266

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
 Frame = -1

Query: 416 VRIEVPPRRAEPENELSQSSPGGRLLSLKRILSMGRRSPATTPC---GAGTS--RVAGEM 252
           VRI+VP      ENE+  +SPG RLLSL+R+++M R SP  +P    G G S   V  E+
Sbjct: 190 VRIDVPVNEPVTENEVKLTSPGSRLLSLRRMVNMSRVSPVVSPSSGGGVGPSCVVVGTEL 249

Query: 251 DLESGISES 225
           D ESG  ES
Sbjct: 250 DAESGRQES 258


Top