BLASTX nr result

ID: Rehmannia30_contig00024944 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00024944
         (1276 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit ...    48   1e-07
gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygro...    46   6e-07
ref|XP_019171018.1| PREDICTED: uncharacterized protein LOC109166...    53   5e-06

>gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit B-like [Dorcoceras
           hygrometricum]
          Length = 161

 Score = 48.1 bits (113), Expect(2) = 1e-07
 Identities = 30/114 (26%), Positives = 55/114 (48%)
 Frame = +3

Query: 456 KWAMKLRLIRFYEKSVYNDRNNVNNLECVFYEAYI*NLVIVMSLNFKFVIKLTVC*ILCF 635
           +WA+KLRL+R YE   Y +++    LECVF++                            
Sbjct: 2   QWALKLRLVRCYELPAY-EKSGDFTLECVFHDK--------------------------- 33

Query: 636 LLQ*YRIYGTIRKDNIVQYNRMLLERNVYAINDFVMANNTDKYKTMNLRYKLFF 797
             +  RI+ +++K  + +   +L + +++AI + ++A N  KYKT   +YK+ F
Sbjct: 34  --EGDRIHASVKKPVLDKVRHILKDGHLFAIKNIIVAENRMKYKTTTSKYKINF 85



 Score = 37.7 bits (86), Expect(2) = 1e-07
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
 Frame = +2

Query: 794  FSWKTHV-QLHDQSFPRLIYNFKSYAELSNVKMVNESMVFGVQCYF*FFHV*ECNNIVYN 970
            F  KTHV ++ D SFP ++++FKS+ ++ N + + E+M+F V                  
Sbjct: 85   FITKTHVCEIFDDSFPSIMFDFKSFNDVKNAE-IEETMLFDV------------------ 125

Query: 971  YNYDFLNFTDIRKVVVMQSTQ*KELGGKMTCFID 1072
                      I +VV   S Q +E GG+ T  +D
Sbjct: 126  ----------IGQVVARDSPQSREFGGRETRLLD 149


>gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygrometricum]
          Length = 250

 Score = 45.8 bits (107), Expect(2) = 6e-07
 Identities = 30/114 (26%), Positives = 53/114 (46%)
 Frame = +3

Query: 456 KWAMKLRLIRFYEKSVYNDRNNVNNLECVFYEAYI*NLVIVMSLNFKFVIKLTVC*ILCF 635
           +W +KLRL+R YE + Y  +N    LECV ++                            
Sbjct: 2   QWTLKLRLVRCYELAAYG-KNGDFTLECVLHDK--------------------------- 33

Query: 636 LLQ*YRIYGTIRKDNIVQYNRMLLERNVYAINDFVMANNTDKYKTMNLRYKLFF 797
             +  RI+ +++K  + +   +L E +++AI + ++A N  KYKT   +YK+ F
Sbjct: 34  --EGDRIHASVKKPVLDRVKPILKEGHLFAIKNIIVAENRMKYKTTASKYKINF 85



 Score = 37.7 bits (86), Expect(2) = 6e-07
 Identities = 17/41 (41%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
 Frame = +2

Query: 794 FSWKTHV-QLHDQSFPRLIYNFKSYAELSNVKMVNESMVFG 913
           F  KTHV ++ D SFP ++++FKS+  + N + ++E+M+FG
Sbjct: 85  FITKTHVCEIFDDSFPSMMFDFKSFTNVKNAE-IDETMLFG 124


>ref|XP_019171018.1| PREDICTED: uncharacterized protein LOC109166548 [Ipomoea nil]
          Length = 335

 Score = 52.8 bits (125), Expect(2) = 5e-06
 Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
 Frame = +3

Query: 408 MAPMLSLIKDINMGKQKWAMKLRLIRFYEKSVYNDRNNVNNLECVFYEAYI*NLVIVMSL 587
           MAP+    KD+ +   K A++LRL+R Y      +   + + EC+F+++           
Sbjct: 1   MAPLYIQGKDLGISTYKKAIRLRLVRTYNVPEGRNSEAIKSQECLFHDS----------- 49

Query: 588 NFKFVIKLTVC*ILCFLLQ*YRIYGTIRKDNIVQYNRMLLERNVYAINDFVMANNTDKYK 767
                             +   ++G I KD + Q++++L E  VYAI DF + ++  +YK
Sbjct: 50  ------------------EGTYVHGNISKDCVEQFSKLLKEGKVYAIKDFAVISHYYQYK 91

Query: 768 TMNLRYKL-FFHGKHM 812
           T +  Y + F H  H+
Sbjct: 92  TTDHTYMIRFTHETHV 107



 Score = 27.7 bits (60), Expect(2) = 5e-06
 Identities = 11/39 (28%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = +2

Query: 794 FSWKTHVQLHDQS-FPRLIYNFKSYAELSNVKMVNESMV 907
           F+ +THV+ H +  FP L++  KS+++L +  + ++ ++
Sbjct: 101 FTHETHVERHRRKGFPNLMFRIKSFSDLMSGSVSDKHLI 139


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