BLASTX nr result

ID: Rehmannia30_contig00024568 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00024568
         (464 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019160466.1| PREDICTED: uncharacterized protein LOC109157...    41   2e-06
ref|XP_019175633.1| PREDICTED: uncharacterized protein LOC109170...    40   3e-06
ref|XP_019193076.1| PREDICTED: replication factor A protein 1-li...    41   3e-06
ref|XP_019191695.1| PREDICTED: replication factor A protein 1-li...    41   3e-06
ref|XP_019163511.1| PREDICTED: uncharacterized protein LOC109159...    41   7e-06
ref|XP_019241546.1| PREDICTED: uncharacterized protein LOC109221...    44   7e-06

>ref|XP_019160466.1| PREDICTED: uncharacterized protein LOC109157038 [Ipomoea nil]
          Length = 319

 Score = 40.8 bits (94), Expect(2) = 2e-06
 Identities = 18/50 (36%), Positives = 31/50 (62%)
 Frame = -2

Query: 151 EGWEDLPDELASLVDRKALCKVQVKANQVKHFTGAFSVMRLTTDANLLKK 2
           +G  DLP EL +L+    L ++ V+  Q +++  AF VMR+ TD  +++K
Sbjct: 180 KGRNDLPKELETLIGLNLLFRIAVRKEQFQNYLNAFPVMRIITDEKIVEK 229



 Score = 38.1 bits (87), Expect(2) = 2e-06
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = -1

Query: 365 T*RYRMQFEVGDDNANVQLLCWDRDCETLIGKSCSELKN 249
           T RYR++  V D + N   L WDR+C  LIG S  +LK+
Sbjct: 138 TLRYRVKVRVVDLDGNAPFLLWDRECLDLIGISADDLKD 176


>ref|XP_019175633.1| PREDICTED: uncharacterized protein LOC109170954 [Ipomoea nil]
          Length = 361

 Score = 40.4 bits (93), Expect(2) = 3e-06
 Identities = 18/50 (36%), Positives = 32/50 (64%)
 Frame = -2

Query: 151 EGWEDLPDELASLVDRKALCKVQVKANQVKHFTGAFSVMRLTTDANLLKK 2
           +G + LP EL +L+    L ++ V+  Q +++  AFSVMR+ TD  +++K
Sbjct: 279 KGRKGLPKELETLIGLNLLFRIAVRKEQFQNYLNAFSVMRIITDEKIVEK 328



 Score = 38.1 bits (87), Expect(2) = 3e-06
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = -1

Query: 365 T*RYRMQFEVGDDNANVQLLCWDRDCETLIGKSCSELKN 249
           T RYR++  V D + N   L WDR+C  LIG S  +LK+
Sbjct: 237 TLRYRVKVRVVDLDGNAPFLLWDRECLDLIGISADDLKD 275


>ref|XP_019193076.1| PREDICTED: replication factor A protein 1-like [Ipomoea nil]
 ref|XP_019175674.1| PREDICTED: replication factor A protein 1-like [Ipomoea nil]
          Length = 355

 Score = 40.8 bits (94), Expect(2) = 3e-06
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = -1

Query: 359 RYRMQFEVGDDNANVQLLCWDRDCETLIGKSCSELKN 249
           RYR++  V D   N   L WDR+C  L+G S +ELK+
Sbjct: 185 RYRLKIRVADLEGNAPFLLWDRECNQLLGISVAELKS 221



 Score = 37.7 bits (86), Expect(2) = 3e-06
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = -2

Query: 163 SKQKEGWEDLPDELASLVDRKALCKVQVKANQVKHFTGAFSVMRLTTDANLLK 5
           S+     + +P EL SLV +  L +V V+  Q ++    FSVMR+ TD  L++
Sbjct: 221 SRHSNATQLIPSELQSLVKQCMLFRVVVRKEQFENLDNVFSVMRINTDQRLIQ 273


>ref|XP_019191695.1| PREDICTED: replication factor A protein 1-like [Ipomoea nil]
          Length = 342

 Score = 40.8 bits (94), Expect(2) = 3e-06
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = -1

Query: 359 RYRMQFEVGDDNANVQLLCWDRDCETLIGKSCSELKN 249
           RYR++  V D   N   L WDR+C  L+G S +ELK+
Sbjct: 172 RYRLKIRVADLEGNAPFLLWDRECNQLLGISVAELKS 208



 Score = 37.7 bits (86), Expect(2) = 3e-06
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = -2

Query: 163 SKQKEGWEDLPDELASLVDRKALCKVQVKANQVKHFTGAFSVMRLTTDANLLK 5
           S+     + +P EL SLV +  L +V V+  Q ++    FSVMR+ TD  L++
Sbjct: 208 SRHSNATQLIPSELQSLVKQCMLFRVVVRKEQFENLDNVFSVMRINTDQRLIQ 260


>ref|XP_019163511.1| PREDICTED: uncharacterized protein LOC109159857 [Ipomoea nil]
          Length = 509

 Score = 41.2 bits (95), Expect(2) = 7e-06
 Identities = 18/50 (36%), Positives = 32/50 (64%)
 Frame = -2

Query: 151 EGWEDLPDELASLVDRKALCKVQVKANQVKHFTGAFSVMRLTTDANLLKK 2
           +G + LP EL +L+D   L ++ V+  Q +++  AF VMR+ TD  +++K
Sbjct: 370 KGRKGLPKELETLIDLNLLFRIAVRKEQFQNYLNAFPVMRIITDEKIVEK 419



 Score = 36.2 bits (82), Expect(2) = 7e-06
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -1

Query: 365 T*RYRMQFEVGDDNANVQLLCWDRDCETLIGKSCSELKN 249
           T RYR++  V D + N   L WDR+C  LIG    +LK+
Sbjct: 328 TLRYRVKVRVVDLDGNAPFLLWDRECLDLIGIRADDLKD 366


>ref|XP_019241546.1| PREDICTED: uncharacterized protein LOC109221522 [Nicotiana
           attenuata]
          Length = 431

 Score = 43.9 bits (102), Expect(2) = 7e-06
 Identities = 20/41 (48%), Positives = 27/41 (65%)
 Frame = -1

Query: 359 RYRMQFEVGDDNANVQLLCWDRDCETLIGKSCSELKNELIE 237
           RY++Q  V D  A + LL W+R+ + LIGKS  ELK  L+E
Sbjct: 189 RYQLQVRVMDRTAFISLLLWNREAQQLIGKSAKELKEGLVE 229



 Score = 33.5 bits (75), Expect(2) = 7e-06
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = -2

Query: 133 PDELASLVDRKALCKVQVKANQVKHFTGAFSVMRLTTDANLLKK 2
           P EL  ++D+K + KV VK   ++     + V+++T D +LLK+
Sbjct: 240 PSELDDILDKKFMFKVIVKQTNIESQDEVYKVVKVTDDGDLLKE 283


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