BLASTX nr result

ID: Rehmannia30_contig00021409 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00021409
         (477 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP12425.1| unnamed protein product [Coffea canephora]             59   5e-07
ref|XP_011101317.1| transcription factor MYB98-like [Sesamum ind...    59   5e-07
gb|AGN52041.1| MYB-related transcription factor [Salvia miltiorr...    59   5e-07

>emb|CDP12425.1| unnamed protein product [Coffea canephora]
          Length = 391

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/45 (60%), Positives = 31/45 (68%)
 Frame = -1

Query: 138 CMDNLSSSKSYLQDFHNLDQFPLTDSSFNPDIGIQANCFDPVNPF 4
           CMDN  S K +LQDF +LD F  T SSFNPD+GI    FDP +PF
Sbjct: 32  CMDNCQS-KGFLQDFQHLDHFSFTGSSFNPDLGIHTTGFDPFDPF 75


>ref|XP_011101317.1| transcription factor MYB98-like [Sesamum indicum]
          Length = 401

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/76 (47%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = -1

Query: 228 DLKRGNIFVKHHSQSLRSLLEGLQSPHAARCMDNLSSSKSY-LQDFHNLDQFPLTDSSFN 52
           D   GN     H  S+   LE L        +DNL SSK Y LQDF N   FP+T SSF 
Sbjct: 4   DTNPGNDQNTLHPSSINLKLETLDDDFY---IDNLLSSKGYNLQDFQNHVHFPMTASSFI 60

Query: 51  PDIGIQANCFDPVNPF 4
           PDIG+Q N +DP +PF
Sbjct: 61  PDIGVQTNGYDPFDPF 76


>gb|AGN52041.1| MYB-related transcription factor [Salvia miltiorrhiza]
 gb|AGN52151.1| MYB-related transcription factor [Salvia miltiorrhiza]
          Length = 428

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/44 (65%), Positives = 32/44 (72%)
 Frame = -1

Query: 135 MDNLSSSKSYLQDFHNLDQFPLTDSSFNPDIGIQANCFDPVNPF 4
           MDNLSSSK YLQDF +L+Q P+T S  N D GIQAN FDP   F
Sbjct: 33  MDNLSSSKGYLQDFQDLEQLPMTASYCNWDTGIQANGFDPFASF 76


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