BLASTX nr result

ID: Rehmannia30_contig00021205 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00021205
         (491 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011088147.1| transcription factor bHLH18-like [Sesamum in...    78   6e-14
gb|AKN09541.1| basic helix-loop-helix transcription factor [Salv...    71   1e-11

>ref|XP_011088147.1| transcription factor bHLH18-like [Sesamum indicum]
          Length = 356

 Score = 78.2 bits (191), Expect = 6e-14
 Identities = 53/130 (40%), Positives = 66/130 (50%), Gaps = 14/130 (10%)
 Frame = -1

Query: 491 LADLGMDDPLFLQQWPSVNXXXXXXXXXXXXXXXXDYHHHQPNNNSQGQHVLDFKKPVES 312
           LADLGM+DPLF QQW SV+                D+HH   +  +     L FK+  E 
Sbjct: 9   LADLGMEDPLFFQQW-SVDPLDELSSVSIASAFGGDFHHSYTSQQAPAAQ-LGFKRAPEP 66

Query: 311 SQIDENRPLKQIKITN--WNINSCKPENMSFDSPPPINSSSGFN------------VNPK 174
           S   EN+PLKQ+K T   WN NSCKPEN+S   PP    + GFN            V PK
Sbjct: 67  SPAGENKPLKQLKTTTVAWN-NSCKPENISSSPPPSSTVNLGFNNISTITNSVVGMVKPK 125

Query: 173 EEVAWYNNSS 144
           EE  W ++S+
Sbjct: 126 EE-TWSSSST 134


>gb|AKN09541.1| basic helix-loop-helix transcription factor [Salvia miltiorrhiza]
          Length = 309

 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 44/116 (37%), Positives = 59/116 (50%)
 Frame = -1

Query: 491 LADLGMDDPLFLQQWPSVNXXXXXXXXXXXXXXXXDYHHHQPNNNSQGQHVLDFKKPVES 312
           +AD GMDDPLF QQW                      +  QP        +LDFK+P E+
Sbjct: 9   IADFGMDDPLFFQQWQVDPMEDFSSISCAFSEGFHQSYTQQP--------LLDFKRPAEA 60

Query: 311 SQIDENRPLKQIKITNWNINSCKPENMSFDSPPPINSSSGFNVNPKEEVAWYNNSS 144
           S   E+RP KQ++ +NW    CK E MS +SPPP +   G  V P +E AW++ S+
Sbjct: 61  SPAGESRPSKQLRTSNW----CKQERMS-NSPPPTSPIVGV-VRPLKEEAWFSPST 110


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